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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073464 ID=TCONS_00073464|Name=TCONS_00073464|organism=Clytia hemisphaerica|type=transcript|length=2320bp
TAAGAATTGAAAACAGTCAATATCATCAtttcaaacagaaaaaaaacatt
caatatcGTTTCCCGGTCCATGTGGAAAACGCGTGGGACTGATTATgaag
atggtggatatagcgTTTCTGAAACATTCAGATAAATTTGTTCCTATGGT
ATGTCCTTAATGTATCCTTTAGAAAAGTAGAGGCACGAGTATAAATAATg
gaatccaagctcaaaaataaattatcttTCTTATTGGGGAACACAAGAAG
AAACCATGAAGACGATATTTGGATTGACCATTCTCTTGACAGTGTGGTGT
TATATGGTCAATTGTGACAGTTCTCCTGCGTTTATTAAAGACCCGAACGT
TGATTTCTGTGGAACTGATGTCAATACTTGTGATGGAAAAACACCAGGCA
TACATGTCACCATGAGTTATATAGCAGTTGAATGTAGTGCAGGCTTCACA
CTGGAAAAATGTTATTATTGCGACTTCGACTACAAGATGGAAGGGAATCC
TAAATTAGGGTATGTTCCAAAGTGTTTGGCATTTTTTGAAGCACCTAGTC
TCAATGCCGGAGaagatttttgtaagaataaATATTGCGAGGGGAAATCG
GCAGGAGAATTCATTGTATCGgggaaagaagaagaagaagattctGAGTT
TCTGGTGAAGTGTACTGGCAATTGTGTTACTGAGCGCTGTTATTATTGCT
CCCTTGACGGATTCAAAGTTAACAAGAGCAAGGACGGACAACCCCCTGAA
TGTGTTTATGAACTTTAAGAAAATACCTTTGAAGTAAATTTAACGATATT
TattgttaaaatctttttaatcatgagatatttgtttttcttaactAAGA
ATTTGTTTGTAATTACAAGTTTGAATCTAAAATCAAGCCATATCAATCCC
CCTAATATTTCGAAGATATCTTTTCAAATTATTCTTTGATTAATTTATTc
taaatttctaattttctaaaaCTTCATTAGAATAATATTTTCATACAATT
CTCCATGTTTATTTTCTAACTTGACCACAAATTTCGAAATTAAAAGTTAC
AGTGCTCTAGAAATATGTCCAAGTTGGATAATATTTCATAATCAAATAAT
ATTACAATTTTCTCTATAAAATTACACCACaatacaaaatattttggtgT
AATTCGTCCAATACCGGTtgcaccaaaaaaaaagtagacaggtttgtcga
gacattgtgagcttcaggatttaaattttttgttcattctttttttattg
tatagaggatgctctaacttgaattttgagctatcatacattaagtttga
aaaagtatttcgaaagttatttccaaaaaactgactttttttccatgtcg
aaatttaaaaaaatcattaaaagtagcaatcacgctataaataagacaaa
atgacaaaaacacaatttcattgttttttttattcctttttctcttatct
tatattttgccaacagtttatCCTTCTTATTTGCAtgtcatgaacatttc
caacaccagcaaactcaatgcagacccaagttctttgagcaactagtcga
ggaatggtgatctattttttcaaaagttttctcacatagcacacacataa
catcaaaacctctcttggagattaccaaaaaaaaattttcagccttTCCA
AAAGTATTATCCCAagtgggaatagcttgttttaccatattcttaaattc
cgtaacgagttttgatgaGCACAGTtgtattttttggtatttttatgtgt
aaaggaGGTAAGTgtaaagagaaaagtttgctcgctgtttttaatgattt
tttgaaatttcgacatggaaaaaaagtcagctttttggaaataactttcg
aactactttttcaaatttaatgtatgtaCGATGGCTCAAagttcaagtta
gagcatcctctatacaataaagaggaatgaacaaaaaaaatttaaatcct
gaagctcacagtatctcgacaaagttgtatacttttttttggtgcacccg
gtataatgTTGAGTAATTAAGAGCCTAGAAAGGTCTCACCCTCACACAAA
ACTTAGATTCGCTCTTTTCggtattgaaatatttttttcaatcgtTCATT
TGATGAACATGGAACTCATTAATGACTCATTGACTCATTTGACGGAGAAT
ATTGAACGAAGCatgcaaaaacatcaaaaactttaaaatagaaaaacaaa
aaaattctaaacaaTGTAAAggttatttttaaaagaaaatttccgTCGCA
TTCGCAGGGTTTATGGTTTCACATCTTTGTTCAAAAACAGGAAAGCTATA
GTGACTAATTAATTAGCAAT Run BLAST on NCBI transcript from alignment at scaffold_92:242684..246144- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073464 ID=TCONS_00073464|Name=TCONS_00073464|organism=Clytia hemisphaerica|type=transcript|length=3461bp|location=Sequence derived from alignment at scaffold_92:242684..246144- (Clytia hemisphaerica)
TAAGAATTGAAAACAGTCAATATCATCATTTCAAACAGAAAAAAAACATT
CAATATCGTTTCCCGGTCCATGTGGAAAACGCGTGGGACTGATTATGAAG
ATGGTGGATATAGCGTTTCTGAAACATTCAGATAAATTTGTTCCTATGGT
ATGTCCTTAATGTATCCTTTAGAAAAGTAGAGGCACGAGTATAAATAATG
GAATCCAAGCTCAAAAATAAATTATCTTTCTTATTGGGGAACACAAGAAG
AAACCATGAAGACGATATTTGGATTGACCATTCTCTTGACAGGTAAGATA
TCATTTTGAAAAGAGAAAAGATCTTAGAGAGGGCTAACGTTTAATGCTTC
TTCTTAACATTACTTTAATACACCCCTGTGTCACAGACCCGCTGGGGCTC
CAGCCTCACTAGAAAATTTGGCAAAATTGTTGTCCTTGTTGGGATAAACT
TTTCTTCATCACTGGGAAAATTGGCTTTGATTTTATCCCCATTCTAAATT
TTATATAAAAAAAATGCATTCCAAACCCCTTTCCGTTGGATCTATTAACC
TCGGAACCATATCCCCATTCGGTTTACAATATAAATTCTTATCCCCGCTG
TGGGGAAAAAGTTTCACCGGGGCTGTGAGAATGGGGTGTTTTAATCTGAT
TAAACTTTTTAGAATTCGCACACTTTTTCAGATTTATTTCCAAGAAACAT
TTAATGCAAAAGATGCATAACGCACCCCTTTCGAAAAATTGGTGAAAACA
TTTTCTAATGGTAGTAGGACCATTTAAGAAAGACTGCCTAAGGGTTACTT
TTTAACCACCGGGGACAAAATTTTAGCAAAATTTTATGGTGAGGCTGGAG
CCCCAGCGGGTCTCACAGGGCGGTGTATTAAAGTAATGTTGGTCCCTTTT
CTGAGGAATAGAGCATTATCCTTCATCCACGAGCCCTAGCACAATCAGGC
TTTACAACGCACGTTTTATCCACCTGAATAAAAACAACAGCACCACCCCT
GGATTGATAATTCATACATCGATTATGTACCTACCTTTTCTTCACACATA
GTGTGGTGTTATATGGTCAATTGTGACATTTCACCTGTTCACCAAAAATT
AATTATGAACTAAAATCATTCCCCTGGAAATTTAAGAATAGCTTTTTACC
CTCTTGGAAAAATGAAAAGACAGCCCCTGGAAATCTTTCTCGGATTTACC
GTCCACCCCCCTGTATGGATATAAAATGGAATGGCCCATTTAAGAAATAC
TACCTAAGGGTTTCTTTTTAAAGGTCCTTCTTCTAACGAATAGAGCATTA
TCCTTCATCCACGAACCCTAGCACAATCAAGCTTTACAGCGCACGTTTTA
TCCACCTGAATGAAAACAACAGCACCACCCCTGAATTGATAATTTATATA
TCGATTATGTACCTACCTTTTCTTCACACATAGTGTGGTGTTATATGGTC
AATTGTGACAGTTCTCCTGCGTTTATTAAAGACCCGAACGTTGATTTCTG
TGGAACTGATGTCAATACTTGTGATGGAAAAACACCAGGCATACATGTCA
CCATGAGTTATATAGCAGTTGAATGTAGTGCAGGCTTCACACTGGAAAAA
TGTTATTATTGCGACTTCGACTACAAGATGGAAGGGAATCCTAAATTAGG
GTATGTTCCAAAGTGTTTGGCATTTTTTGAAGCACCTAGTCTCAATGCCG
GAGAAGATTTTTGTAAGAATAAATATTGCGAGGGGAAATCGGCAGGAGAA
TTCATTGTATCGGGGAAAGAAGAAGAAGAAGATTCTGAGTTTCTGGTGAA
GTGTACTGGCAATTGTGTTACTGAGCGCTGTTATTATTGCTCCCTTGACG
GATTCAAAGTTAACAAGAGCAAGGACGGACAACCCCCTGAATGTGTTTAT
GAACTTTAAGAAAATACCTTTGAAGTAAATTTAACGATATTTATTGTTAA
AATCTTTTTAATCATGAGATATTTGTTTTTCTTAACTAAGAATTTGTTTG
TAATTACAAGTTTGAATCTAAAATCAAGCCATATCAATCCCCCTAATATT
TCGAAGATATCTTTTCAAATTATTCTTTGATTAATTTATTCTAAATTTCT
AATTTTCTAAAACTTCATTAGAATAATATTTTCATACAATTCTCCATGTT
TATTTTCTAACTTGACCACAAATTTCGAAATTAAAAGTTACAGTGCTCTA
GAAATATGTCCAAGTTGGATAATATTTCATAATCAAATAATATTACAATT
TTCTCTATAAAATTACACCACAATACAAAATATTTTGGTGTAATTCGTCC
AATACCGGTTGCACCAAAAAAAAAGTAGACAGGTTTGTCGAGACATTGTG
AGCTTCAGGATTTAAATTTTTTGTTCATTCTTTTTTTATTGTATAGAGGA
TGCTCTAACTTGAATTTTGAGCTATCATACATTAAGTTTGAAAAAGTATT
TCGAAAGTTATTTCCAAAAAACTGACTTTTTTTCCATGTCGAAATTTAAA
AAAATCATTAAAAGTAGCAATCACGCTATAAATAAGACAAAATGACAAAA
ACACAATTTCATTGTTTTTTTTATTCCTTTTTCTCTTATCTTATATTTTG
CCAACAGTTTATCCTTCTTATTTGCATGTCATGAACATTTCCAACACCAG
CAAACTCAATGCAGACCCAAGTTCTTTGAGCAACTAGTCGAGGAATGGTG
ATCTATTTTTTCAAAAGTTTTCTCACATAGCACACACATAACATCAAAAC
CTCTCTTGGAGATTACCAAAAAAAAATTTTCAGCCTTTCCAAAAGTATTA
TCCCAAGTGGGAATAGCTTGTTTTACCATATTCTTAAATTCCGTAACGAG
TTTTGATGAGCACAGTTGTATTTTTTGGTATTTTTATGTGTAAAGGAGGT
AAGTGTAAAGAGAAAAGTTTGCTCGCTGTTTTTAATGATTTTTTGAAATT
TCGACATGGAAAAAAAGTCAGCTTTTTGGAAATAACTTTCGAACTACTTT
TTCAAATTTAATGTATGTACGATGGCTCAAAGTTCAAGTTAGAGCATCCT
CTATACAATAAAGAGGAATGAACAAAAAAAATTTAAATCCTGAAGCTCAC
AGTATCTCGACAAAGTTGTATACTTTTTTTTGGTGCACCCGGTATAATGT
TGAGTAATTAAGAGCCTAGAAAGGTCTCACCCTCACACAAAACTTAGATT
CGCTCTTTTCGGTATTGAAATATTTTTTTCAATCGTTCATTTGATGAACA
TGGAACTCATTAATGACTCATTGACTCATTTGACGGAGAATATTGAACGA
AGCATGCAAAAACATCAAAAACTTTAAAATAGAAAAACAAAAAAATTCTA
AACAATGTAAAGGTTATTTTTAAAAGAAAATTTCCGTCGCATTCGCAGGG
TTTATGGTTTCACATCTTTGTTCAAAAACAGGAAAGCTATAGTGACTAAT
TAATTAGCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073464-exon-scaffold_92-1575043694:245853..246144 | TCONS_00073464-exon-scaffold_92-1575043694:245853..246144 | Clytia hemisphaerica | exon |
| TCONS_00073464-exon-scaffold_92-1575043694:242684..244711 | TCONS_00073464-exon-scaffold_92-1575043694:242684..244711 | Clytia hemisphaerica | exon |
| TCONS_00073464-exon-scaffold_92-1510915933:245853..246144 | TCONS_00073464-exon-scaffold_92-1510915933:245853..246144 | Clytia hemisphaerica | exon |
| TCONS_00073464-exon-scaffold_92-1510915933:242684..244711 | TCONS_00073464-exon-scaffold_92-1510915933:242684..244711 | Clytia hemisphaerica | exon |
| TCONS_00073464-exon-scaffold_92-1491911889:245853..246144 | TCONS_00073464-exon-scaffold_92-1491911889:245853..246144 | Clytia hemisphaerica | exon |
| TCONS_00073464-exon-scaffold_92-1491911889:242684..244711 | TCONS_00073464-exon-scaffold_92-1491911889:242684..244711 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_92 | supercontig | scaffold_92:242684..246144 - |
Blast
The following BLAST results are available for this feature:
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