TCONS_00073662 (transcript) - C. hemisphaerica

Overview
NameTCONS_00073662
Unique NameTCONS_00073662
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3167

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00073662 ID=TCONS_00073662|Name=TCONS_00073662|organism=Clytia hemisphaerica|type=transcript|length=3167bp
AGCTTTTCATGATAATAAGTAATAAAATTCGAAGAAAAAGTAATACATAT
AATTTTCTATGGTTGGCACCTACTGGAGACATTTTGTTTAAACAAGGGCA
TCAGAGGGAACGttgtgaaattaaaaaatgcagAGTATTGTATTTGAACT
GTTCCAAGAGAATTTTCTTCCAGATCCTTGGTTTGCAGACAAGTATGGAT
TTTATGATCAAATCGAGAAATCTGACGAGAACGCTTTAGAATCACTTGCT
GACCATTTCGAATcactcagtggggataaagagCTCGGTTCATTAGAAGT
TTCACACGGTGTGAAATGGGAAAATTATTTGGTAGCACAAGGTACCGCAC
CACTACAGAAAACGGAGGAACTCAAAGCACTCGTCCGAAGTGGTATCCCA
CACGAATTCCGTGCGCGCGTCTGGGGCGATCTCGTCCGCCTGCGTAGTGA
TCACGAGCGGACGATTGCTGGGCAAGGCTACTATGCTAACTTAttgaaag
agaagaaaggagcTTACTCCCCGTCTGCCAAACAGATTGAATTGGACTTG
TTGAGAACGTTACCGAACAACAAATATTATGATACGCTTGAATCTGAGGG
GatttcaaaactACGACGCATTTTGACAGCGTACAGTTGGCATAACCCAG
CTGTTGGATACTGTCAAGGATTAAATCGTTTGGGAGCCATCGCACTGTTG
TATTTAGATGAAGAAACAGCTTTCTGgTGTCTTGTAGCGATCACTGAACA
TCTAATGCCAATTGATTATTACAGCAGAACACTGCTCGGTGCGCAAATCG
ATCAAAAAGTATTTCGTGACTTGTTGGACGAAAAATGTCCGAAACTGAGT
GCTCATCTTGTCTCCTTGCAGTTCGACATATCGTTGGTATCATTCAATTG
GTTCCTGACTGTTTTTGTTGATCTCTTTCCGATTGAGTTGACGTTAAGAG
TGTGGGATACATTTCTCTTCGAAGGTAGCAAGGTTTTATTCCGGTACGCA
TTGTCCGTCTTCAAACTTTTCGAAGAAGAATTCCTACGCTTTAAAGATCC
TGGACCGATGTTCAACTTTTTCCGAAATCTACCCAAAAAGAAATTCAACA
TTCAAAAGATTTGTTACATAGCTTTCAACACGATGAACCCCTTTAGTCGT
CGTAATGTGGAATCGAAAAGGAAATTCTACAGACCTATTCTTCAAGCACA
ACTTGACGAGTTTGAAATTATGCGTGAGGAATACAAGGAGAAACGGGAAG
ACAGTATTTCTATTCACGATGAAGAACCAATCAGTGACGACGAGAACTAA
CCATTGTCCAATCAGATGGCGAGAAATAGTATAGTTGTCCAATCAGGATC
CAAGGATTGATTTCATAATCCAATCAGATGGCGAGAAATAGTATAGTTGT
CCAATCAGGATCCAAGGATTGATTTCATAATCCAATCAGATGGCGAGAAA
TTGTTATGGTTGTCCAATCAGGATCCAAGGATTAATTTCATCATCCAATC
AAAATCGCGAGACCACATGAAAACTGTGATGTCACCATCCAATGAAAACA
CTAAGAATGATTGATAGCCAATCTGATCAAAGAAAAGGTTTGATTCTTTC
AAGTTGGACCAAAATCAAGATATGGCCACTCTTGTTATTTGTTAAAACAC
TGGAAACTAATGATTGACCAATGAGAAAACCCGATTTAATGTCGCAATTA
CTGTATAGATTTCTTTCATTAAAACGGAAGAGCTGATTAAACCTGGATAA
ATTccactaaaaatattttatggtTTTAGCTAAATTTCAACTGTTATTCT
CGCCTGAAATTTTGACTCGTTTTTGAGGTCACTCATTGATCAAAACTAAA
TGAAATAAATGGATACCAATATTTTTTATGTGAATACAAAATTCagttta
gtatttttttttcttaaggtgaggccaatttaatttgttgttttacgggc
caagcgaCCCAagaaagagggtcggtcgggcggttgaaaataaaaataaa
agtagaattttaccTATTAAAATCTCCTCAAAAGGCAGCAAAtctactac
atcttgacaaaaatgcgaaatagaaaataaaaaggcacaaaaaggtcgaa
ttctagtcgaattcatggataaaatgaaaaatagaacattaaattctcaa
aattttggaaaaacaaactcctatttcgaaaatttgggagtctgtaaagc
aatgaaaataaaaatgtgctaccaaaatgaattttatttttatttcgatt
tttgaaatttcagggttGTTTGGACCCgcaaaacaactaatcaaaatGGT
CTCGCCTAATCATATAATTGTTGATAGActgtaaatttttaaaagaattt
aaagTGTATATAATGCACCCTCGAACTTCTTCGAGTCACTAAATTGTCAT
AATTCAATCTCTTATTCGTTTTAAAAAGCAAACTTTAGTCATTAAAGGAT
AAAAAAGGGAGCCTCGTTACCTACAGCAatgttttaaaacaatttttggc
TTCCATTTCcctatttttgagagggaggtcTTGTAATAGACAACACAAGG
TATTCTGTCATCCATCGTTAAGttacgtaaataaagcctgggatacacag
gGACCAGGATTCGTGCACATATATCTTGATTAAtgatattcatgacgtaa
tgttttctacggaaatactccggtttttgccagtagtggcaaatttaact
TTTATCTAGTTTAAATATAATATTATGAATATTATTGAAACATTattgaa
tatcatgaataagatCTTAATTTAGCATTTGGCAATTTCTTTCCAGGGAT
ATTTTTACTCATTCGGGATAAGAGTTAAAAACTTACCTTCATATAACGAA
TTAATTAAGCTGAATTCAGGGTAtagatttttttacttttgatttatatt
ttttgaaattaatttaaattataAGCTTCGATTTTTGTTAATTATATAAA
TGATAACTGGGAAATTCTATTGTCTTTCTTGTAAATATTCAGAggatttt
tttatatgtttttttttttgcaatttagtttttcttattctttttatATA
CCAGGataacaataatttttttaatttattacgATTCTACAGATTTTATT
TCCTAAATTTATTGCTaatattttttcagttttaaatcAAGATAATTCTT
TGACAATAAAATATAAC
Run BLAST on NCBI

transcript from alignment at scaffold_97:462563..474055+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00073662 ID=TCONS_00073662|Name=TCONS_00073662|organism=Clytia hemisphaerica|type=transcript|length=11493bp|location=Sequence derived from alignment at scaffold_97:462563..474055+ (Clytia hemisphaerica)
AGCTTTTCATGATAATAAGTAATAAAATTCGAAGAAAAAGTAATACATAT
AATTTTCTATGGTTGGCACCTACTGGAGACATTTTGTTTAAACAAGGGCA
TCAGAGGGAACGttgtgaaattaaaaaatgcagAGTATTGTATTTGAACT
GTTCCAAGAGAATTTTCTTCCAGATCCTTGGTAATAAGATTTAGCAAAAA
TTGCTTTCGCATTTTTTCCGTTAGGCCAATATAACTCCCCAATATAACTT
GAATTTCAGCTTCACtatgttttttttaagtttgaaagTCAATGCTAATG
TCGGAGCTATTGCCCTTTAAAAACGTTTTCTACCAGTCTTGAATTCACta
actttttcacattggattgatacggatgtggagcaagaaagaggaaaaga
aaagcatttttgTGCTTATATCAgtacaatataacaataggcagacaatg
tcctggtatgaaatatgtgtctgatatgaaacgggaacacttatgtagaa
ataaaacctttaagagtATAGTAGGGTAGAGATATCTgtattaacttttc
ctaatcatttgATATTTCTCTAGGTTTGCAGACAAGTATGGATTTTATGA
TCAAATCGAGAAATCTGACGAGAACGCTTTAGAATCACTTGCTGACCATT
TCGAATcactcagtggggataaagaggtatttttgaaaaacaaacttcaa
gCAATTCTGATTATcaattacattttattttcttaagGCTTTGGGACAGG
AGAAATCTTTTTCGCGTTGGTTCAATGCAACATgatccatcccaccaacc
tgaaacgtaTTCTCGTGTCCCCACCCTATtcttctttctaccaataataa
aagtgaaatctcattgttgtccctgggacaatggagtaAAAtcgattcga
atcaattttgttCCATTGTCCTAGGGACAAaattggtgggatggagcatg
taaaatgtaaaatacaaaagtttTCATGAGACAAATTTACATTTCAATAA
AGTATAGAAAGATATATTTCTGTTTccaaattctgcaaaatttccaaaaa
tttcaagaatatatgCTAATTCGCTTGTTAAAAACCCATTATCCGTCTCA
CACGTAAcgccttgctttgaccactaaAAAGTTCTCTCTACATTAATATG
TCTTCCAGGGTTATCGATTGAGGAATGACCTTGCTGGCTCATAATTTACT
TACACTTTTCTTATTCTTTAGCTCGGTTCATTAGAAGTTTCACACGGTGT
GAAATGGGAAAATTATTTGGTAGCACAAGGTACCGCACCACTACAGAAAA
CGGTACGTCATGGCTCGGAATATAAATTTCATTATTGGTCCGATCAGGGT
TGtcttagtttgaaaattatgatttttggatCGAACAAGgataaatttca
gaaatttggGTCAGACAATGTTCGACCGTTCTTTTCAAGTCCAGTTTGTG
TTCCCATTTCTGTAAGTTTTTGGAccgtcctataaattaacccatgtccg
ttcgtccgtccgtccgtccgtccgtccgtccgtccgtctgtccgtccgtc
tgttaccagcttttctcaggattggctcattagttttttttgatttttgg
cacaatgatgcaaaatggtaatgcctaaaatgtgacggagcccgattttc
gaaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNaatcttttccggtcgaaaatgccggaaatatgccggaaa
tcgccatttttgcagattttcatcggactttttccttatatttcgttgtt
ttttcacacaaaaacataattaatagcaatgcccaccatgaagcatggtt
caatcgtcaatagaaCTGAGTATTGAAgtcggaactttctaaaaatcgcc
gatgcagcccattttcgccggaaaaacggtatttcttgattttctcgagc
tgtactttatgtttttttatgaaattttgcacactgatgcaaaatgataa
tacctaaaatgtgacagagcccgaatttcgaaaaacatctttttccggcc
gaaaaagccggaaatatgccggaagtattgtttttttggcattttctcga
gattttatcattagttttttctgattttttgcacaacaatgcgtattaac
aatgcccaaaacatggccgagtccgatttttgagaaaattttatttccgg
cagaaaatgcctgaaatatgccggaaatcgccgttttctgGGTTTTCATT
GGGCTTGTTCCTTTtaaatggttgttttttcattcaaacacattattaat
agcaatgtccaccatcaagcatgtttcaattgtcaataaaactgattttt
gcgaccacaactttctatttattttttccttacaaccctttcctctcccc
ccccccatcaacaatcaatgatgaattttttgcgttatgcatttttgtta
aacgctatattttctgactgatttttttcatttttctcctcgcattgctt
tctaactttcatcatcaggtaggtctattcagcatctagcttgttataTG
TAAGTTTAGCTATGTAAAGTGCGCCACCCTAATTTCTTACTAGTTTTAAC
CAGTGTCAAAAGCATTCAGAAAGTATCGCTAACTTATCATTGACCCTTAA
AACCTTTTACATTTTTCAGGAGGAACTCAAAGCACTCGTCCGAAGTGGTA
TCCCACACGAATTCCGTGCGCGCGTCTGGGGCGATCTCGTCCGCCTGCGT
AGTGATCACGAGCGGACGATTGCTGGGCAAGGCTACTATGCTAACTTAtt
gaaagagaagaaaggagcTTACTCCCCGTCTGCCAAACAGATTGAATTGG
ACTTGTTGAGAACGTTACCGAACAACAAATATTATGATACGCTTGAATCT
GAGGGGGTGAGTAATTTGATATTATTGTCcctagtggaaaattatactct
aatttctGTACCCACTGAAAATattcagataagcaaatcctcagcGCTGA
ATATAGTGCTACTTTTCTATcgccactgaattttctggctcgaaaacaat
ggaattcaaatcctcagccataaaaaacatgggaatatcaatccccatca
agtttgGTCCGtcaattttacccccactggccgAAAAAATTCCTACCTAC
CCAACATTTTTCTATATGTCAAGAGGAGTGTACTAGAATGAAAGTGTTAC
AATTCTTTAAAAGAAACCTCGATAATTTGACTTTTCTgacttttcatttc
tttttttcagatttcaaaactACGACGCATTTTGACAGCGTACAGTTGGC
ATAACCCAGCTGTTGGATACTGTCAAGGATTAAATCGTTTGGGAGCCATC
GCACTGTTGTATTTAGATGAAGAAACAGCTTTCTGGTAAGAGaattattg
ttgttttttgagaCGAAAATTTTCTTATGTGAAACCCTTCAGGTTTTCTG
CCTTTCGCAGATCAAAATTACCAGTTTATGTATTGGAGGATGttgagggc
gacggtaagtgaagccaacgcaaaacaaagtcgaaAGTTGATATAccgct
ctatatcgcctttgctaacctaacagacgacggtattttggtatttttac
cgtcgtcgagccaAAGTGAACGGTGATTTTGgtgacatgtcaactttgct
ttaaaCCGTCTCCCACGATTTATTTCGagtacataaactcgctattgaaa
agaaaaactgttctcttttaatttaaaaacatgCCTTTAGAATCGTTTTA
AGTTATTATGTTTCTCAAAATTGCCTAAAGCATGCAGTGTCAAAAGTTAA
AAGAGGAGACGGAACGAAAACAGTGTCAAAAGTTAATTTACCATTTGTAT
TTGTATCATTTTCCAtcaattttcttccttttctttttgttttaggTGTC
TTGTAGCGATCACTGAACATCTAATGCCAATTGATTATTACAGCAGAACA
CTGCTCGGTGCGCAAATCGATCAAGTGAGTAAAGTCGTGGCTTTCAAGGA
AAGGCTACTGAAGTCTGAAGAAATCGTTTTCTTGTTCCTTCAACTAGCAA
TATAactcaaatttaaatttctccCTGGCGTGTTCGAGCAATGGAGACTG
CATTGTATATAATTGTATATTCAATGTCGAAGACCTAAACAGCTATAGTT
TAGGTGTTTTTGTGTCCGTTTCGCCCTCTCGACATACATCTCAATGCATG
GTTTATTATTTAGCTTATTACATATTAGGTAGATTTTTCCatatattttt
aatattatttttgttCCTTTCCAGAAAGTATTTCGTGACTTGTTGGACGA
AAAATGTCCGAAACTGAGTGCTCATCTTGTCTCCTTGCAGTAAGTTATTT
TCAATTGTTATGGTTATAATAATTGtgttagctctagtttagacggccta
CTTCTGaactgcctattctaattgctaGAGTAGGAAAAAAATGGtacatt
gacgtcaaaaaaggcAATACATTGACTTTAGTCATCCAACTTTTTGCCCA
CTTCAATTCAAAATTAGGATAGGCAGGGCAacaagtgggccgtctaaact
agatgTAATTGTTTCTTTCCGGTCTTGGTTCTCACGTAACTTGATCAAAA
GATGATTATGAATATGATAATGAttgtgaaaatatgaaaatcaaCGCGTG
ATAATCATCGGGATGTAGACCGATCGGTGATCTTTTACTTGTGATCTGAT
ATTTATTGTCGTAGgacgagaccaatttgattagttgttttatgGGCCCg
gccgaccctgaaattccaaaaatcgaaataaaaataaaatttattttgag
tagtacatttttattttcattgcttttacAGACTGctaaattttggtagt
ttttccaaagttttgagaatttgatGTTCAATTTTCCATTTTATCCATGT
Tttcgagctttttgtgtctttttattttctatctcacatttttgtcaaga
tgtagtagtttttgctgcctttttaggagattttataatgtgaaattcta
cttttatttttattgttttgccgaccgaccgaccctcttttttgggtagc
ttggcccgtaaaacaacactttaaattggcctcgcctagTTTTTGAAGTA
TCGAGTAGTCCCATaacatgatttttttattgacttATAGGTTCGACATA
TCGTTGGTATCATTCAATTGGTTCCTGACTGTTTTTGTTGATCTCTTTCC
GATTGAGGTAAGTTTCCGAAGGTGTTATAAGAATATGAGGCTGATCAGGG
GAATCAGATGGTTTCTGTGGATTTCTTTCCAGGGTCCTAAGAAAacctgc
aaaatatttttgtctgacTCCTTTCAAAAGTTGAGATAACACATTTTGAA
ATTCGGTTCTTACACGTCCTATTCGTTTATTGCTAAAgaagtcaaaaact
tttaacTAGAATGTATCGACTTTTGGAAAGAGTTGTGCAagaatattttg
aggttttgatCAGGACTATTGAAGAAATCTACGGTCAAAATATATCCCAG
atcatcaaattttaaattaaatgTCAGATTcaacaaattaatttgaaaat
aggaaatatttcaacaaaaaaaagaacCGTCGGGTTAAAATTTATTAACT
GTTAaccattaaaggttttgtttttaaataaaagtgatatcgtttgctta
ctttactcataaattttaattcacaatctTTTTCACATTTATTTGACACG
gaaaagaaaacctttttttgtttatatcagcatacagcacctgaccccga
gaatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCtctgaaacaaatttttatgaagttgaactatcg
ttagggctacaatgctaaaaaatgagaaacctacattctcggggtttact
acattcttggggtcaggtgctgtaatataacaataggcagacactgtcct
gatatgaaatatgtgtctgatatgaaatatgtgtctgatatgaaacggga
acacttgtgtaaaaataaaacctttaagctttttttatggaaaaatcATT
GAGAACAGGTTAAGAATCAGAGAAAATAGGATAACTTCTAGATGCGATCA
TTAAAATGCTTAACGATTTATTGAAATAATTTGTTATTTTCAGTTGACGT
TAAGAGTGTGGGATACATTTCTCTTCGAAGGTAGCAAGGTAAGTTTTGTT
TTCAGGCCATATTAACTCTCTCGAAACACTCACTGTCGGttacgcaattt
tttttccgtaagcaATAGACCTACGtgatggtgattatgtcccttgagac
ataaaatgattttttttgaatagaaagtagttttattaaaatccgctggg
agttaatcaccatggcaataatttctaaacggggcaagtgatgttcgtaa
cgtaatttatgaaaaagtctatcCAAGACCTCCAAAACTTTTTTAGCGCA
AAATCTAGCTATCCAAGACCTGATTTAGCTATCTAAGACCTTCCTGTTTT
GCCGTGCGGAAGCATTTAGCTATCCAAGACCTGATTTAACGATCAAAGAC
CTGTAAGACTTACAAATCTATCATATTTTAGCTATCCAAGACCTTCAACT
CAATTTGCGTCGAGAATTCTCTCCAAATCGGCCGTCATACTCGTACTAAA
TAAATTTCCTTTGTACACAAAATGTACGAGTAGGTAAAAATCTCGTAATA
TCGCGGGAACAAATTTTCCCAGTGCGAGGGTATTACATTGGCGCATTttg
tggaactaattttcgcgtttaACACCCACTTTTTGcgaaattctttcata
ttcctagaggtttttgaggatttttagtAAAAGTCACATTTCGCGGAACT
ATCTTTCgcggtagacacccaaaaacgcgaaaattagttcccttaagggt
AGTAAAGTTAGTCTTGTACAGTTTGCTGCAATCTGTCGAAATTTGAACAG
CTATTGGCCTTCTTCTATCCTCTTAAGCTATGTtatgaaaaacaacaaac
tCGAACCCAGGCCCTTAGCctgctttttttataattttgattgttACATA
GACGTGTACCAACGTctatcagaaaaataaaaaaagttatttaagGGGCC
CTTGGTACGAGAGTGGGGAAACTCCACACTGAGTAAGGTCAATAATTTTG
Acgcagttgacgctctctaatttgatcttcaaggggaattggatttttat
cgaataagagagcttatcgaataagggagcgtcgtttatgagagtttgtt
gttgacTGGGACTTTAAATTCCATCGAAGAAGGGAGCcaatcgaatagta
gaacgtcgaattagagagcgtcaactgtataatttttatttttacgcAGG
TTTTATTCCGGTACGCATTGTCCGTCTTCAAACTTTTCGAAGAAGAATTC
CTACGCTTTAAAGATCCTGGACCGATGTTCAACTTTTTCCGAAATCTACC
CAAAAAGAAATTCAACATTCAAAAGATTTGTTACATAGCTTTCAACACGA
TGAACCCCTTTAGTCGTCGTAATGTGGAATCGAAAAGGAAATTCTACAGA
CCTATTCTTCAAGTAAGCCTTTGTTAATACAGTTGAATTAAATTTCTAAC
ATGATCTTCAAAGGACGAAGAATTTCcttcaaattagagaaagatttgaa
ttatatCAAGTATTTTATACTAAATGCTAGCTGAGAGGACTAATATTTTA
TTTCGAAATACACAGAGAGATTCGGATAAAGGGATTCTATTTAGAAACAG
TTGACTgtagaatatttttttctgcattgatttgttttttgttgtctttt
tatcgagtttatgtatttgcacttttgaggacgagAACGGTAAAAGTGTC
GTCCTCAGTTAGTCAGGATGTAGTCGAAATAGACGCTAACCGTCTCGTGT
GTTATTCCAAATTGCCTCAGTCACTCCACCGCCctcaaaaatgcaaatac
ataaacttgctaatATTACGTCGCACGTTTTTCTTaccgacccttatagt
gcatttTCATGGCGATGGATGTTTCTAAAAAACAGtcatttgtaaaaaaa
tgtattttttcaaCTTCAAAGGCACAACTTGACGAGTTTGAAATTATGCG
TGAGGAATACAAGGAGAAACGGGAAGACAGTATTTCTATTCACGATGAAG
AACCAATCAGTGACGACGAGAACTAACCATTGTCCAATCAGATGGCGAGA
AATAGTATAGTTGTCCAATCAGGATCCAAGGATTGATTTCATAATCCAAT
CAGATGGCGAGAAATAGTATAGTTGTCCAATCAGGATCCAAGGATTGATT
TCATAATCCAATCAGATGGCGAGAAATTGTTATGGTTGTCCAATCAGGAT
CCAAGGATTAATTTCATCATCCAATCAAAATCGCGAGACCACATGAAAAC
TGTGATGTCACCATCCAATGAAAACACTAAGAATGATTGATAGCCAATCT
GATCAAAGAAAAGGTTTGATTCTTTCAAGTTGGACCAAAATCAAGATATG
GCCACTCTTGTTATTTGTTAAAACACTGGAAACTAATGATTGACCAATGA
GAAAACCCGATTTAATGTCGCAATTACTGTATAGATTTCTTTCATTAAAA
CGGAAGAGCTGATTAAACCTGGATAAATTccactaaaaatattttatggt
TTTAGCTAAATTTCAACTGTTATTCTCGCCTGAAATTTTGACTCGTTTTT
GAGGTCACTCATTGATCAAAACTAAATGAAATAAATGGATACCAATATTT
TTTATGTGAATACAAAATTCagtttagtatttttttttcttaaggtgagg
ccaatttaatttgttgttttacgggccaagcgaCCCAagaaagagggtcg
gtcgggcggttgaaaataaaaataaaagtagaattttaccTATTAAAATC
TCCTCAAAAGGCAGCAAAtctactacatcttgacaaaaatgcgaaataga
aaataaaaaggcacaaaaaggtcgaattctagtcgaattcatggataaaa
tgaaaaatagaacattaaattctcaaaattttggaaaaacaaactcctat
ttcgaaaatttgggagtctgtaaagcaatgaaaataaaaatgtgctacca
aaatgaattttatttttatttcgatttttgaaatttcagggttGTTTGGA
CCCgcaaaacaactaatcaaaatGGTCTCGCCTAATCATATAATTGTTGA
TAGActgtaaatttttaaaagaatttaaagTGTATATAATGCACCCTCGA
ACTTCTTCGAGTCACTAAATTGTCATAATTCAATCTCTTATTCGTTTTAA
AAAGCAAACTTTAGTCATTAAAGGATAAAAAAGGGAGCCTCGTTACCTAC
AGCAatgttttaaaacaatttttggcTTCCATTTCcctatttttgagagg
gaggtcTTGTAATAGACAACACAAGGTATTCTGTCATCCATCGTTAAGtt
acgtaaataaagcctgggatacacaggGACCAGGATTCGTGCACATATAT
CTTGATTAAtgatattcatgacgtaatgttttctacggaaatactccggt
ttttgccagtagtggcaaatttaactTTTATCTAGTTTAAATATAATATT
ATGAATATTATTGAAACATTattgaatatcatgaataagatCTTAATTTA
GCATTTGGCAATTTCTTTCCAGGGATATTTTTACTCATTCGGGATAAGAG
TTAAAAACTTACCTTCATATAACGAATTAATTAAGCTGAATTCAGGGTAt
agatttttttacttttgatttatattttttgaaattaatttaaattataA
GCTTCGATTTTTGTTAATTATATAAATGATAACTGGGAAATTCTATTGTC
TTTCTTGTAAATATTCAGAggatttttttatatgtttttttttttgcaat
ttagtttttcttattctttttatATACCAGGataacaataatttttttaa
tttattacgATTCTACAGATTTTATTTCCTAAATTTATTGCTaatatttt
ttcagttttaaatcAAGATAATTCTTTGACAATAAAATATAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_045740XLOC_045740Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00073662-exon-scaffold_97-1491911889:462563..462742TCONS_00073662-exon-scaffold_97-1491911889:462563..462742Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:462563..462742TCONS_00073662-exon-scaffold_97-1510915933:462563..462742Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:462563..462742TCONS_00073662-exon-scaffold_97-1575043694:462563..462742Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:463136..463238TCONS_00073662-exon-scaffold_97-1491911889:463136..463238Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:463136..463238TCONS_00073662-exon-scaffold_97-1510915933:463136..463238Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:463136..463238TCONS_00073662-exon-scaffold_97-1575043694:463136..463238Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:463784..463864TCONS_00073662-exon-scaffold_97-1491911889:463784..463864Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:463784..463864TCONS_00073662-exon-scaffold_97-1510915933:463784..463864Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:463784..463864TCONS_00073662-exon-scaffold_97-1575043694:463784..463864Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:465482..465718TCONS_00073662-exon-scaffold_97-1491911889:465482..465718Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:465482..465718TCONS_00073662-exon-scaffold_97-1510915933:465482..465718Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:465482..465718TCONS_00073662-exon-scaffold_97-1575043694:465482..465718Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:466073..466197TCONS_00073662-exon-scaffold_97-1491911889:466073..466197Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:466073..466197TCONS_00073662-exon-scaffold_97-1510915933:466073..466197Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:466073..466197TCONS_00073662-exon-scaffold_97-1575043694:466073..466197Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:466708..466786TCONS_00073662-exon-scaffold_97-1491911889:466708..466786Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:466708..466786TCONS_00073662-exon-scaffold_97-1510915933:466708..466786Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:466708..466786TCONS_00073662-exon-scaffold_97-1575043694:466708..466786Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:467087..467151TCONS_00073662-exon-scaffold_97-1491911889:467087..467151Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:467087..467151TCONS_00073662-exon-scaffold_97-1510915933:467087..467151Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:467087..467151TCONS_00073662-exon-scaffold_97-1575043694:467087..467151Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:467953..468019TCONS_00073662-exon-scaffold_97-1491911889:467953..468019Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:467953..468019TCONS_00073662-exon-scaffold_97-1510915933:467953..468019Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:467953..468019TCONS_00073662-exon-scaffold_97-1575043694:467953..468019Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:470156..470200TCONS_00073662-exon-scaffold_97-1491911889:470156..470200Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:470156..470200TCONS_00073662-exon-scaffold_97-1510915933:470156..470200Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:470156..470200TCONS_00073662-exon-scaffold_97-1575043694:470156..470200Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:471362..471574TCONS_00073662-exon-scaffold_97-1491911889:471362..471574Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:471362..471574TCONS_00073662-exon-scaffold_97-1510915933:471362..471574Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:471362..471574TCONS_00073662-exon-scaffold_97-1575043694:471362..471574Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1491911889:472084..474055TCONS_00073662-exon-scaffold_97-1491911889:472084..474055Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1510915933:472084..474055TCONS_00073662-exon-scaffold_97-1510915933:472084..474055Clytia hemisphaericaexon
TCONS_00073662-exon-scaffold_97-1575043694:472084..474055TCONS_00073662-exon-scaffold_97-1575043694:472084..474055Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_97supercontigscaffold_97:462563..474055 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0915482	0.0916411	0	0.456728	0	1.77825	1.24799	3.08507	3.20174	0.708384	1.31654	1.32474	0.664495	1.38472	1.50948	1.3975	0.916943	2.18451	2.48378	1.42054	1.37404	0.174135	0.5269	0.279439	0	1.31581	0.957193	0.209861	0.0815331
Blast
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BLAST of TCONS_00073662 vs. Swiss-Prot (Human)
Match: TBD2B (TBC1 domain family member 2B OS=Homo sapiens GN=TBC1D2B PE=1 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 2.042e-83
Identity = 155/333 (46.55%), Postives = 222/333 (66.67%), Query Frame = 2 
Query:  296 EVSHGVKWENYLVAQGTAPLQKTEELKALVRSGIPHEFRARVWGDLVRLRSDHERTIAGQGYYANLLKEKKGAYSPSAKQIELDLLRTLPNNKYYDTLESEGISKLRRILTAYSWHNPAVGYCQGLNRLGAIALLYLDEETAFWCLVAITEHLMPIDYYSRTLLGAQIDQKVFRDLLDEKCPKLSAHLVSLQFDISLVSFNWFLTVFVDLFPIELTLRVWDTFLFEGSKVLFRYALSVXXXXXXXXXXXXDPGPMFNFFRNLPKKKFNIQKICYIAFNTMNPFSRRNVESKRKFYRPILQAQLDEFEIMREEYKEKREDSISIHDEEPISDDE 1294
            EVS GVKWENY  +     +  + ELK L+R+GIPHE R++VW   V   +   +     G++  LL++     +P++KQIELDLLRTLPNNK+Y    SEGI KLR +L A+SW NP +GYCQGLNRL A+ALLYL++E AFWCLV I E  MP DYY++TLLG+Q+DQ+VFRDL+ EK P+L  H    + D +L++FNWFL VFVD    ++  ++WD+FL+EG KV+FR+AL++FK  EEE L+ +D   +F + R   +   + +K+  I+F  +NPF  R + ++R ++   ++ +L E E +RE++   RE   S    E +SD+E
Sbjct:  630 EVSTGVKWENYFASTVNREMMCSPELKNLIRAGIPHEHRSKVWKWCVDRHTRKFKDNTEPGHFQTLLQKALEKQNPASKQIELDLLRTLPNNKHYSCPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAVALLYLEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLMSEKLPRLHGHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARKLISISFGDLNPFPLRQIRNRRAYHLEKVRLELTELEAIREDF--LRERDTSPDKGELVSDEE 960
The following BLAST results are available for this feature:
BLAST of TCONS_00073662 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBD2B2.042e-8346.55TBC1 domain family member 2B OS=Homo sapiens GN=TB... [more]
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