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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073694 ID=TCONS_00073694|Name=TCONS_00073694|organism=Clytia hemisphaerica|type=transcript|length=1359bp
atttcctgaaaatttcattacgaaatgtaaagaagttcttgagttattgc
aaaaaatgtgattttttgacttttgaaatctggcggtagactaccacctt
aaaggAAATAGTTTTATTAATAGCCTGGATATGCAGACTGTAAACTTTTT
GTGATGCTTCTGGTTTACCCCCTGGCTTTCTTAAAATGATTTGCATTCTA
ATGGGTAATTTGTCGACTCAAATGTTTCGTGGGGACGAGGTGGAGAATTT
ACAAGCACTTACTTGATTtagttggtcgttaaccagtaataaaacaattt
tgctaatttttctaaagaacgcgtcatttttattacttcagatgaccaat
tattaaagtatcttatataaactccatctcatctggtgGCGTGAAGCTAG
AAATTTGTCGACCCTGGCTCTATACAAGGCTGTATCTAGGTAGACCAAGG
GGTAAACAGCAGAAACAtcgaaataagaaaataattttgatatccaggct
attttattatattttgtttattcaattatgtttgattcgagctacacgtt
ttttataagaacaaactatataagaacataaggctttgatggccagaATG
TTaggaaaaagttaagaacattttaaggctttgccgtCTCACGAAACAGC
tggtttcttagaaaaatgggcaaCAATTCtcaaatggtgaaaataagaac
atgctaagaacatttttaggcttaagactcgcaaaaagtcaagaacatcc
gaagacttcaaaaactttggatgttcttataaaaaaacgtgtattgcctA
TTCTTGGCTAGAAAAAGAGCTCTTCCAGGTTTCTGCAGAGTTTTATAACA
TTCGCCATTATGGACAAAAAAATAGCACATTCCCCTCTTTTGAGTAGGCC
CAATTATGTTCAAAGCGGTGAAGTTTGAAAGTGTCGTATAATTCCTTAGG
AGCATACAAGAATGTAGCAAAGCAACCGACATTCTATAAATCCTTAAGAA
TTCCAGAGAAGGTTCCGTGTACGAGAATCCAGGAAAAATAACTGAGATTG
TAGGAGCGGTAAATcttgcaaaaattaagaatatcagAAGTGCTAAACCG
TTGTGTGGTAGTTATTCgcatttttttattcattttatccttttttaaga
tttttatttctTAATTTGTATATTATTTTGTTGATTCATTAGAACTAgat
gattttaattttgtttgatattgatttaaattttgatttttttttacggG
GAGGTCGGATATTTTATTTATTGGGAAATATGATACTGAAAAACAAGACA
GATGCAAgcttctttttttaaaagcaaaatcagcTAAAGTCGCACTTATT
ATAAGAACA Run BLAST on NCBI transcript from alignment at scaffold_97:38522..39957- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073694 ID=TCONS_00073694|Name=TCONS_00073694|organism=Clytia hemisphaerica|type=transcript|length=1436bp|location=Sequence derived from alignment at scaffold_97:38522..39957- (Clytia hemisphaerica)
ATTTCCTGAAAATTTCATTACGAAATGTAAAGAAGTTCTTGAGTTATTGC
AAAAAATGTGATTTTTTGACTTTTGAAATCTGGCGGTAGACTACCACCTT
AAAGGAAATAGTTTTATTAATAGCCTGGATATGCAGACTGTAAACTTTTT
GTGATGCTTCTGGTTTACCCCCTGGCTTTCTTAAAATGATTTGCATTCTA
ATGGGTAATTTGTCGACTCAAATGTTTCGTGGGGACGAGGTGGAGAATTT
TCAAGCACTTACTTGATTTAGTTGGTCGTTAACCAGTAATAAAACAATTT
TGCTACNGGGGACGAGGTGGAGAATTTACAAGCACTTACTTGATTTAGTT
GGTCGTTAACCAGTAATAAAACAATTTTGCTAATTTTTCTAAAGAACGCG
TCATTTTTATTACTTCAGATGACCAATTATTAAAGTATCTTATATAAACT
CCATCTCATCTGGTGGCGTGAAGCTAGAAATTTGTCGACCCTGGCTCTAT
ACAAGGCTGTATCTAGGTAGACCAAGGGGTAAACAGCAGAAACATCGAAA
TAAGAAAATAATTTTGATATCCAGGCTATTTTATTATATTTTGTTTATTC
AATTATGTTTGATTCGAGCTACACGTTTTTTATAAGAACAAACTATATAA
GAACATAAGGCTTTGATGGCCAGAATGTTAGGAAAAAGTTAAGAACATTT
TAAGGCTTTGCCGTCTCACGAAACAGCTGGTTTCTTAGAAAAATGGGCAA
CAATTCTCAAATGGTGAAAATAAGAACATGCTAAGAACATTTTTAGGCTT
AAGACTCGCAAAAAGTCAAGAACATCCGAAGACTTCAAAAACTTTGGATG
TTCTTATAAAAAAACGTGTATTGCCTATTCTTGGCTAGAAAAAGAGCTCT
TCCAGGTTTCTGCAGAGTTTTATAACATTCGCCATTATGGACAAAAAAAT
AGCACATTCCCCTCTTTTGAGTAGGCCCAATTATGTTCAAAGCGGTGAAG
TTTGAAAGTGTCGTATAATTCCTTAGGAGCATACAAGAATGTAGCAAAGC
AACCGACATTCTATAAATCCTTAAGAATTCCAGAGAAGGTTCCGTGTACG
AGAATCCAGGAAAAATAACTGAGATTGTAGGAGCGGTAAATCTTGCAAAA
ATTAAGAATATCAGAAGTGCTAAACCGTTGTGTGGTAGTTATTCGCATTT
TTTTATTCATTTTATCCTTTTTTAAGATTTTTATTTCTTAATTTGTATAT
TATTTTGTTGATTCATTAGAACTAGATGATTTTAATTTTGTTTGATATTG
ATTTAAATTTTGATTTTTTTTTACGGGGAGGTCGGATATTTTATTTATTG
GGAAATATGATACTGAAAAACAAGACAGATGCAAGCTTCTTTTTTTAAAA
GCAAAATCAGCTAAAGTCGCACTTATTATAAGAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073694-exon-scaffold_97-1575043694:39719..39957 | TCONS_00073694-exon-scaffold_97-1575043694:39719..39957 | Clytia hemisphaerica | exon |
| TCONS_00073694-exon-scaffold_97-1575043694:38522..39641 | TCONS_00073694-exon-scaffold_97-1575043694:38522..39641 | Clytia hemisphaerica | exon |
| TCONS_00073694-exon-scaffold_97-1510915933:39719..39957 | TCONS_00073694-exon-scaffold_97-1510915933:39719..39957 | Clytia hemisphaerica | exon |
| TCONS_00073694-exon-scaffold_97-1510915933:38522..39641 | TCONS_00073694-exon-scaffold_97-1510915933:38522..39641 | Clytia hemisphaerica | exon |
| TCONS_00073694-exon-scaffold_97-1491911889:39719..39957 | TCONS_00073694-exon-scaffold_97-1491911889:39719..39957 | Clytia hemisphaerica | exon |
| TCONS_00073694-exon-scaffold_97-1491911889:38522..39641 | TCONS_00073694-exon-scaffold_97-1491911889:38522..39641 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_97 | supercontig | scaffold_97:38522..39957 - |
Blast
The following BLAST results are available for this feature:
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