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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00073848 ID=TCONS_00073848|Name=TCONS_00073848|organism=Clytia hemisphaerica|type=transcript|length=1236bp
AAACAATTCACAGGACCAAACATTGATTTCAAACTAGATTGCATTTTACT
TATTtcactgaaaaagaaagaagaagaaaatcaagtaAGCtaggaaattt
gaaatttatggtTAGTTCTCATGAGTTTGACAATTGTTTTTAAAAGCGTT
TTAAAAAAGGGTTTAAGGAAACAAGGAAAAAAAGTTCCCgaaattggaat
ttttttcagccaatttgAGAAAACAGGAGGGATTGTGAGGAGGAGGCTTC
TTGGTTAGTCCTTCCCTTTTTAGTTCAACACAATATGCTTTGAATCTTAC
GTTTGAAGCCAGAAATTGTTTCTCGTTGATAATAGTAATGTCTTTTCGAA
GCTCGGTAAGTTTTCTCTGCAAACCAAATAGCCCGGGAACGACAAAAGTG
CAATTTATCTCTGATGATTTGAATTGGAGCCAATAAAATACAAGAGGTCA
TCCCTTTTTGCATTtggtttcttcatttttatcccccgactaaaaatttc
tcactcgtcactgagacaggggtgtagtaaATGACAACGAATTACAAATT
CATTATGTTTGAgcctagaaataaaaaaacactatttccaaaaattacaa
aacaacCAAACTTATAACCTAGAAGTAGAGTCAAATAAATGACAACaatt
acaaattaaaaaaacactatttccATCGATGATACTCAAGACAAACATta
caaaacaaccaaatttaTAAACCTAGAAATAGATGAAAAgttacaaatta
aaaaaaaactaaaaagtctTAGAGTACCTTTTGCTCACGAACATTCAAAT
TAAAATAGACCTTCAACAGACTTATTAGTAGGATCcttagcaaaatttaa
aaaagcaaGACACTCCAAAGGCCAATGTTTGAAATTGTGCGAGTCAGGAG
GTGGaatatagtaaatattttgctattttaaaaaactttttggcaATGCT
GGGGAGTAACTGATGACAATTCATAAGGATTACAAATATTTTCCGTTCTT
TAATTAAAGGTAACGACTCATTTAATGATCAACAGACAACACGTCTATCT
GGCGTCCATATTGCCCataaaacgttagatgaacgtttaaAAACAGTCAT
TACATTTAAAGCTTTcttgaacacccctgtctcagtgcctcGGTGTGAAT
ACTTCTACTCTCGGTTACCTAATAGCCGGTGGGTTTGAAATAAGCggagg
ggttggaaaaatctcaaaacttaataggCGGGGGGG Run BLAST on NCBI transcript from alignment at scaffold_98:249934..251169 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00073848 ID=TCONS_00073848|Name=TCONS_00073848|organism=Clytia hemisphaerica|type=transcript|length=1236bp|location=Sequence derived from alignment at scaffold_98:249934..251169 (Clytia hemisphaerica)
CCCCCCCGcctattaagttttgagatttttccaacccctccGCTTATTTC
AAACCCACCGGCTATTAGGTAACCGAGAGTAGAAGTATTCACACCgaggc
actgagacaggggtgttcaagAAAGCTTTAAATGTAATGACTGTTTttaa
acgttcatctaacgttttatGGGCAATATGGACGCCAGATAGACGTGTTG
TCTGTTGATCATTAAATGAGTCGTTACCTTTAATTAAAGAACGGAAAATA
TTTGTAATCCTTATGAATTGTCATCAGTTACTCCCCAGCATtgccaaaaa
gttttttaaaatagcaaaatatttactatattCCACCTCCTGACTCGCAC
AATTTCAAACATTGGCCTTTGGAGTGTCttgcttttttaaattttgctaa
gGATCCTACTAATAAGTCTGTTGAAGGTCTATTTTAATTTGAATGTTCGT
GAGCAAAAGGTACTCTAagactttttagtttttttttaatttgtaacTTT
TCATCTATTTCTAGGTTTAtaaatttggttgttttgtaATGTTTGTCTTG
AGTATCATCGATggaaatagtgtttttttaatttgtaattGTTGTCATTT
ATTTGACTCTACTTCTAGGTTATAAGTTTGgttgttttgtaatttttgga
aatagtgtttttttatttctaggcTCAAACATAATGAATTTGTAATTCGT
TGTCATttactacacccctgtctcagtgacgagtgagaaatttttagtcg
ggggataaaaatgaagaaaccaAATGCAAAAAGGGATGACCTCTTGTATT
TTATTGGCTCCAATTCAAATCATCAGAGATAAATTGCACTTTTGTCGTTC
CCGGGCTATTTGGTTTGCAGAGAAAACTTACCGAGCTTCGAAAAGACATT
ACTATTATCAACGAGAAACAATTTCTGGCTTCAAACGTAAGATTCAAAGC
ATATTGTGTTGAACTAAAAAGGGAAGGACTAACCAAGAAGCCTCCTCCTC
ACAATCCCTCCTGTTTTCTcaaattggctgaaaaaaattccaatttcGGG
AACTTTTTTTCCTTGTTTCCTTAAACCCTTTTTTAAAACGCTTTTAAAAA
CAATTGTCAAACTCATGAGAACTAaccataaatttcaaatttcctaGCTt
acttgattttcttcttctttctttttcagtgaAATAAGTAAAATGCAATC
TAGTTTGAAATCAATGTTTGGTCCTGTGAATTGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00073848-exon-scaffold_98-1491911889:249934..251169 | TCONS_00073848-exon-scaffold_98-1491911889:249934..251169 | Clytia hemisphaerica | exon |
| TCONS_00073848-exon-scaffold_98-1510915933:249934..251169 | TCONS_00073848-exon-scaffold_98-1510915933:249934..251169 | Clytia hemisphaerica | exon |
| TCONS_00073848-exon-scaffold_98-1575043694:249934..251169 | TCONS_00073848-exon-scaffold_98-1575043694:249934..251169 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_98 | supercontig | scaffold_98:249934..251169 . |
Blast
The following BLAST results are available for this feature:
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