XLOC_001652 (gene) - C. hemisphaerica

Overview
NameXLOC_001652
Unique NameXLOC_001652
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000024:822941..831497-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001652 ID=XLOC_001652|Name=XLOC_001652|organism=Clytia hemisphaerica|type=gene|length=8557bp|location=Sequence derived from alignment at sc0000024:822941..831497- (Clytia hemisphaerica)
GTCGGATTTTTCATCGTGAAACGTTCAGAAATGATACTTTGAATTTTATC AATGACTTAATCAATCAAAAAGGTTAGTTTCGTGAGTTTCCTAATAATTT GTGTAAAGTCTCTTTCAATATAATCTGCAGCGGGACAATAAAATCTGTAA CTATTGATATAATTGGATTTCCTAGCTTAACCGTGTCGGAAGAAAATTTC TACATCCATTGTTAGATAACCAGCTACTTTTCGTCAGGTTGTGGGTTCGA TCCCCAGCCAGTTCATATCAAAGATCACCAAATTTTGTACTTGAAGCCTC GCTGTTTGAAGCTCCGAAATCAGATGCCATATACAGCCTAGAAACTTAAA TGAGTAAATTTGCAACAGCGTAATGTTTTGTATTTATCAGTTAGATTTTA CTGTATAATACGTAAATTTTATTTATGGACAGCCCAGTCGTTCAATCTTT TTCATGGAATCAACCGCCTGCTCGGCTCTGCTCGTTTATTTTTTTCATAA GAACAAACTATATAGCATGAATTTTTGGTGGCTTCAGAAGGCTTCAAAAT TGTTGGGTATAAAAGACGTGTTTACAGTTGACTCTCTCTAATTCGATCTT CAAGGGGATGAAAACTTTTATTCAAATTAGAGATAGATTCGAATTACATA GAGTAACTTAAGCCACTATCCAGCTAAGGGACCAATATTTTTGTTCGAAT TACAGAAAGATTGGAATAATAGAGATTCGAATTACAGAGAGTTGACTGTA TTAGGCAATACATACCCTGAGTATCAGAGGTTAAGTTTTCAAAGAATATA TTAACCTCTGAAGACCAATAATATAAATTTCATCGCGCATGTGTCAATCT AATCACTGTAGAGATGAAGAGCAAATATTACGATATTAATGTCTAGCAGA TTGTATCAGTATACATGTTTACAATTGACGAATTCCCCAGAAACTTCCAA GTGTAGTTGAAATGATTTTCTCTCAAAAGAAATCTTCTATATGATTCTCA AATGTATAACAGTAATTATTAGATTATTAATTATGGTAATATTACTTCAA TGGAATCGAAATAATAGAGAAATCTTGTGTTATGATTCTCTATCACTGAC TTTTTTTAAAAAGCATTGATGACATTTTTAAGTTGTGTTTTCAACGACGG GAATAAAAATATCGACTATGACCCTCATCCAAGATCTTGGATGGTCGTCA TGGTTACTTTTCTCTGCGTTGATTGCGCGCTGAATAGAATCTCGATTGGT CGACACAGGTCAATATATGATTTTGGCCTGTGCTTTTCAGTAGGCAATAC ATGGAAAGAAATGGGAAAGAATCAAACTGAAATTATTTTCCTTGTTTGTC ACCTTCTTATCCTTTGTAATTTTCATGTTCGTTTCTAGATTTCAGTTGTA ACCATGCCATAGTTGTTACATATGAGAATATGCCTGAGTTTGGTGTTTAC ACATCAAGGAATAGCTTCCAAATCGTGCTAGCGTCAGATGGGAAAGTTAC CTACGGTCTAGCTCTCTATTACCGCGTAGACTCTTATGATCGCGCTATGG TTGGCTATGGAGAAGCAACATGTAACACAGGCATTAAGGTAATATATATA GTGGTTGTTACTCCCATCCCGGTAGAAGCTTTACATTTCTTAACGTCAGT CACTGTGGCAAAGAAGACTTACAAAAACCGATTTACTTTTTCTAATGCAT GATATTTTTTATCCTTTTTTAATCCAAATGTTTTTGAAATAAGGTTTACG AGCAGCCTAACTTCTTGGATACGATAGAATGAATATAATAACAAAAATGA AGAACATTGACGAAATCTTATCTTGCCAATACCATCCGTCATGTTGCATG AAGAAAACAACCAATTTGTTTTGGAGACCTTCTTTACGACAACATTCTTC AAATCTTTACTGCATATCAATTTGGGCTATAAGAGACTTTTTAACCGATG ATTTCCAAAGCAATGTCTGACGAAAAATCCTCGACTATTTAGTAATCTTT CTAGCCCTTTCTAAAGTTTTGGCAGTTTTCTAATAAAATAACATGTTATT GACGTACCAAATCGTTTCTCGCCAGGTTGCACCTCCATCTCAACAACAAT TGGACGAGTTTGGACATCGAGTGAACACAAAGATATTCTTATTGACAAAT TCAGTATGTAAAGCCAAAATTGACAGTAAGTCTATAACATTTTGAAGATC TTTTAATACACATTTAAGCGGCTCCCAGCAGAGTCTCTGACCATACAAAC AACTTACCCGTCTGGCACGCAACGTCAATCTAATGTTCACAACGTCCATT TAACATTAGATGAACGTACCAGAGTAACTTCAAGAAATTGAGTAACTTAC AGTCTCGGGGAAGGGGAAGGGGGAGGGAGTCACTCGATTTAAAAAAGACA TTAAAAATTAGGCATGTACAGTGCAGAGAAAATTAAGCCAAATTCGAGTA AATTTAGGCGGAAAATCGACTCTTACGGCGCATTTCTTGAACATTTTTCT GTCTATTTTAAGACGCTTTACTCCCTATTAAATCCTTAGAGTGCACTTTC TCTCATTTTAGCAATTACCGTATACTTTAATTGAAAAGCCTGAAAATATA CCCCTAAAGGTCACACCTATGGTAGGTCGCTTAACTTAAGTGCCTCCCCC ATGATGCATTCGGATGATGCTTGAACAAAACCAATTTAGTACATACCCAT CATTACCCTGAGTATCAGAGGTTAAGTTTTCAAAGAATATATTAACCTCT GAAGACCAATAATAGAAATTTTATCGCGCATGTGTCAATCTAATCACTGT ANAACCCATCCGGCTCCCAGGCACCTGTATAGAAAATAGCATCTTGGCGT CTCAAAGTTAGTCCAGTGGTAGGAAATCTGCATAAGGTGCAAAGGGATGA TGGTTCAACGCCATGAAGAGAAGGCTTTGTAGAGCTTTGTTAGATTTTCG AAAACTTTTTACAAAACGTTGTAAATTGTAAAAAACGTATGCGCAACGTC GCACGCTGCAAATTCCCCAGAAACCTCCAAGTGTAATTGAAATGAGTTTC TTTCAAAAGAAATCTTCTACCTGATTCCCAAATGTATAACAGTAATTACT AAACTATTAATTATGGAAATGTCACTTTTAATTGAATCGAAATAATAGAC AGACTTTATGGCCGTGTTCAGACCTAGGTTTAAAGTAATTATGTCCGCAT GCCTCTTTTATATTCCTTTTGTNTATCGTAACATAGGCCGTGTTCAGACC TAGGTTTAAAGTAATTATGTCCACATGCCTCTTTTATATTCCTTTTGTAT TTAACTGCACGCTCCTCATTAGTTAAACCAAAGTTTAAAAAGGAATCACC CTCTGGTTTAAAAAAAAAGTTTTNNNNNNNNNNNNNNNNNNNGTCAATAT ATGATTTTGACCTGTGCTTTTCACGGTAACACATCATTGATTGGAATACG TTATTTTGAATCATCCGAATGCATCATTCTCGCCTAGCCGCAGCTTAATT CACATTATAGTTAAGTCTCCATAACTAGAAAACAAAAATGGGGAGCAACA ATTTGCTCGAGTTAATGTTGAGTTAGTAAGGTTTATAAAGCATTGTTAAC TAGAGGGTCCACAAAGTTCGAGTTAAGGAAATATTCAAGTTATAGAGGTC ATGATATGAGCCCTTCCCATAGAGGAATAGGTCCTACTCCTTGCGAAGTA GGAATTCCTCCTTTTTCAAGGCGGAGTGCATAGCGCTGTTCAGACACCAA TGGTGTAGTTCGTCGCAAGCGCAGGTCGGAAGGTCTGAGTCAAAGAAACT CCACTCCAATAAACTTAACGCTTATAAAAAGCAAACTTTTAATTTATTTT CCAGGCTATTTATATTCATATGGCGAATCAGTTGGTGATCAACTTCTGCC GTATGATAGCTTGAACCCAGTTCGTGAATTAGTTGTGGAAGATCCTTTCC AATATTTTGATAAGGATGTGCACAAAATATATGCAAGTATTTTCATCATT TTAATACACCTTTTCGACCGTAGCCACCAATTGCCACGCGGGCGTTTTTT GTCCACTTTACCACCCTAAGAACCGTCCCAGTCTTTTTTTCGCACCTAAA GACAATAGAAAAAAGTGTAAGAAAAGGATTGGATCGGGTTTATAAGGTGG TAAATTAAATAGTAAAGTAGCACGCGCTTGACCGTGCGACTACGGTCGAA AAGGTGTCTTGCTTTTTATTAAATGGCATAATTTAACGTATCTATCCTGC CATTTGCTTAAACAGCATTTATACTTTTTCCCCTTTCAGTGGCGCGCAAG CATAAATTTTGTGAAATTCTTTTGTTGGTTCTGCTTTGTAAACATATCAT TGAATGATCCGGAGCTTCTTCTACCAGAGCAACGAGTTTCTATCAGAGGC TTCCATTTCCCGTTCGGTTCATAGATAACTGTGGGTCCCGTTAACAATCC AAGAAACCCTAAAGTATCTAAATACACCCCTGTCTCACAGACCCGCTGGG ACCCTAGTCGCACTAGAAAATTTGGCAAAATTTTTGTCCCCGGTGAGAAA ATACCCTGGAATTTCAACTGAGAAATTGACTTTGATTTCATCTCCAATCG AAATTTAATGTTAAAAAATTGCACTCCAAAACCACGCCACTGGATTTTTG AACCTTGGGACAATAAAATTGCTTTCCCATTGGGATTTCAATAGGAACTT ACTTTTATCCCCCCGAATAAAAAAGTTCCACCGGGGCTATGGGACAGTGG TGTTTAAATTACTGATCTATCCATATAAAAAATATTACTCCCTCTTGTCC GTGTCTGTGTATTTGCATTGGTATTTATATCAATTATGCCTTCTGAAAAA ACAACGTTATAAATGGAAATTTCATTGTAATGCAAGGTCAAAACTCAATC ATGCAGGTCACCTTCTTTAAAAAATTACAGAAAAATGCTTACGCAGCTAA AAAACATATCTCATCATCCTTGAAGTTCAATATCTCGACAAGCAGACAAT TGGCACATAGCAAGCAATACCATTTTCTGATAGAATTCTTTCAGAGCTAT ATAAAAATACCATCTAATGATCAAAAAAAGTTTTGGCTTCAGCAAAAATG CTTAAAAAGGGCCATATCGTTGGTCCAGATGGTCCAACCAAACAAACAAC CCCGCATTATTTCATCGGCTCAACAAACTGAATCTTGTAAAGAGACCCTT AACGACGTAATTTTGCCCATTGTGACCCATCATTCCATATGATTGGAGTT TGCTAACACCAAAAATTCAATTCTCACATAACATTCGGAAACATTTTGCG TACAATTTTTCCGGTAAGCTAATTTTGACCCTCGATATATAAAACGTTCT TGATTGGTTTGGCTGTAAGGAAGGTTTTGTCGGGGGACGGCAGCGTAGAA AAGTGGCTTCATAAAATCTGTCGCTTAGAAAGGTCCATTTCATTAAGTTT AAAGCCCGAAGGGCTGGAGTAGAAACTCTAATCTTTCCCATGCAAGAAAA CATGAAGCCACTTATTTCCCATCCAGATCGCGCCTAGAATGCGCCGCAAT CACGACGACGAATTGTATCTAGGAGTTCCTTTGTTTTTGAGGATTGTTTT AATCTAATGATAGATTTTACTTTCAATCCGGCGTTTGTGTAAAAACCACG CAGAGGCGTTCTGGATGAGAAATAAGTGGCTGGTGTCGAGTCTAGCCCTT CGAACTTGGAAGTCAATGGTCCATTCCTGACAATTTATTTAACTGTTTAA ATAATTATAGATCAGCAAGTATGGTTTTATATCATTACACGAACCCGCTC AACATTCACTCGTGTGGTTCCCGTATAAATACACTTCAATTATATACGGA TATCTTACGCTTCTACCCGGTAATGTTTACTACCGGCAAACAAATGATAC AGCGGAAATCAATGTGTTGTTGGAGAATCTGATTGAAATGAACTTGCGAA CAACTTTTGACAGTGTTATTATTATAACGTAAGTGTTTGTCAAACAGATT ACGATTTAACTTAAGAGAAGAAATTTTGGTACTACAGTTTTTTATCATGG CATATTTCTATCGAAACAAAAGTCTCAATTTTCAACTATCCGGAAAAGTG AAATGCAGGAAGTGGAATCTTATAAAAAACGACAGTACAACCATAAAATT TTTCTTTCCATTTTACAGATTGATATTTAAATTCTTCTAGATATCATACA GAATCTCGAAATGATCCTGAAGATTCTCACTTGCGTACCAACAACTTTCA AATTATTTTGGCAAATCGTCCAGGAAGTCCTGTCTATATTCGATTCATGT ATGAACATTTTCATGACTTTTTTTCATTTTTCAAATTTTCCAATTAACCC GGTCAAAAAAAGAATATTAACAAAAGAAAATCTGTCCTCCATTAATTTTA AGTTTCTTTTGTAACCGCTGCTGGCGTCGGTATTTCGTTCTTTGCTACCC CGCATGTCCCCATTAAATTTCGCAATCGCCTATACAAGATTAGCCTATAC TAGACGTCACCGCTTTTCCGTACGCAGTAAGATATTTTCTACTTTTACGA CTTTTTCGAATGTTTCGGGCCAAGTTTTTTGGGTTCTAAACATTCGATAT TTTGACGTCATTTTAAAGTTTTGAAGCTATTTTAACGTCTTCTAACATTA CATCACGGAGACAACAGCTGATTGGTTGCAAGTGACGTATTAACTGACTT TACGTCACTTTACAACAAAACTTGCTGTTGGGTCTATGGTGTGATGTCAA AAACATTGTAGTGATGTATATCATGAATATAGAGCATGATCATAACATGT GATCAAAAAATAGTATGGTGGGATAGAGAAATGCTAATTTCACAAGTATA TTTTAAAATTGTACACTTGTTTCCCCACTCAGATATCGTCGTTTGGACTA TATATTTGGAATATCAGGATTCAGCGTTCCAGGTTGTTACCAAGGTCAGA TTGTGGACCCGAGAGCTTCTCATTACTTGACAGTTACATCAAATGGTGAA AGACATTATTTCGGATGGTCAAACTGTAATACTAAACATACAGGTATAAC AATACACTTTTCTCGAGATGCATAAATTTATTGTTGTCCTCGTTTTCAAA CAGATTTCATTGCTATGAAATTATAAAGTACTTGAAATTCAAAATGTCTG ATGAGGTGTAAACAACACAATTATCATTGTGAACATGTAATTTTATAGCA ATGAAATCTGTTTGAAAACGAGGACAACAATAAATTTATGCATCTCGAGA AGAGTGTATTTCGTTGTTCCTATGAGAAAAGGTTCGATCTCAAATCAAGT GTCTTGATAATGTTATAATTTTGCACTCCTATTCTTTATGTGAGATTGGC CTTTTTTGTTCTATGGAAATATTGACTATTGCTCCGTATGTGCCTAATCT CAATATCAAAGATAAAAGTCACAGTTAAACTATTGATTTTGCAAGGCACT CATTTTCAGATTGAACTATTGGTCATGTAAACATCTAATTAGACTATGCT ATATAATCTAAAACAAATCACTATCTAAGAAATAAGCCTACAGCCGAAGA AAATTCTCAAACGGATTTTAACCTTGCCAGTCTTTTTTTTCTTCGCTTCT TTGAAACTCTCCCGCCGATTATTTTCCCGTCTACCACCATAGCGGCTGTG AACACCGCGCATAATATGATTTTTCCACTTTTACCACCCCTGTAACGAAC GGTAACATCATGTAGTAAAACAATTAAACCTGTGCTACACTTTCTTTATA TAACAACCCTTTCTCACAGACCCGGTAGGATTTTTTCAGCCAGTGTGAGT AAAAATAACAGACCAAAAGTAGATGGGGATTGATATTCCCATGTTTTTTA TGACTGTGGATTTGGATTCAATTGTTTTAGAGCCAGAAAATTCAGTGGGG ATGACAAAATAGCACAATATTTTGCAGTGAGGATTTACTTTTTGATTATT TTCAGTGGGGAAGAATTTAGAGAATAATTTTCCACTGGGGACGATATCTT GGCTAATCTTTCCTGTGGGAAAGGGTGGTATATAAAAGCAAACTATTTAA AAACCTAAGACTTAAAAAAATTACTCTTCTCCTTGCTAGTTGCCCATTTT GGGAGCATAAATTTCCATACCAAGGGGGGGATGGACCAACCGTTTCACTT CGAAAAAAGATTCTTAGAAACGTGTGCACACCCTGTGGAAAAAAACAAAA TTCGCAAAAGAACCCTTGGAAGAATTGTTTTCATAACTTAAAGTAAGGGT AGACGAACTGAAATCAGTTTTTTGCCCCCCCCCCCCCCCAATTTTTTTAA AAAATTAAAAAAGGGGTGAACGAACTAAAACCAGTTTTTTTCCCCCCCCC CCCCTAAATATTTTAGAATAACTTTTTTCCCCTGGAAAATGGTCCTGCTT AACTTTAATGTTATCTCTATCACAAACTCAACTTTGTGCAACGTTAATAT TTTTTTCCTGCACTGTAAAACATCTGATATAGACTTAGACTCCTACTTTT TCACTTTTCAGCATTTTTACCAAACGGAGCTGTTTGTGGGGACTTGTTTA ATTCAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003020TCONS_00003020Clytia hemisphaericatranscript
TCONS_00003019TCONS_00003019Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003020-proteinTCONS_00003020-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000024supercontigsc0000024:822941..831497 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.19 0.1 0 0.06 0.16 0.57 0.3 0.08 0.1 0 0.26 0.07 0.07 0.14 0.09 0.41 0.46 0 0.1 0.67 0.91 0.49 1.21 0.74 0.54 0.14 0 0.53 0.24