XLOC_001749 (gene) - C. hemisphaerica

Overview
NameXLOC_001749
Unique NameXLOC_001749
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000025:296540..303329-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001749 ID=XLOC_001749|Name=XLOC_001749|organism=Clytia hemisphaerica|type=gene|length=6790bp|location=Sequence derived from alignment at sc0000025:296540..303329- (Clytia hemisphaerica)
CGGAGTTTTTGGTTTTTCTAGAACAGCGATGCATTGTGGGATTGTTTCGG GGGTACAATAGAATTCCCTCGATGAATTCAAAAGAGATTTCTATTGTAAT ACCCCTGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAATCAAAAAC TCCGATAAGATCTATTTATACATTTAAACTCCCTGCACAAGCTGGCGATT TTAATAAGTGTCTACTACCCCTATATGAGGCTCGCATTAGTAAGACAGTG TTATGCTTATTGAAATTTATGTGGTATTTTTGAATAAAAAAGCGTTAGGT TATCTTGATGAAAGTACTTTTAATCAATATCTGTAAATCATTTTTACATT TAAACTCCCTACACAAGCTGCACAATTTCATATCAATCAGATACAGTGTA AGAAGCGCATGTTGTAAAAGATAAAATATGAAGTTGACATTGTTTTTTGT TGCAGCACTCATCTTTGCAGTCCAATGTACGTATATGTTTTTACCTGTAT GTAATATAGTGTTTGTTTCGAATGATTGACACACTTTTGAGATATTTACC TTTGGGGTAAAATTTTTAATTCTATCCTCTTTAAATTGACTTTTAGACTT TCTGGAAAATCTAATTTCGCATCGACCTGTTTTTTTTTTGTAAAATCATG TTTTTCGAAGGTAAAATCATGTTTTTCGAAGGTAAAATCATGTTTTTCGA ATGTAAAAATATGTTTTTCGAAGTTAAAATCATATTTTTCAACGACCCAA TCGGCTTACACATAATTACCGTGAACACCATAACTTAGTTTCCTCCTAAA ATTAAGCTGTGAAAGACAAACTGTAAGGATTTTACTGCGCACGTCTGAAT CACATTACTATCCAAAGAATCGAAGATGAAGAACACATAGTTAAAGCTCA AGTAGATTTTTATAATTTTCGATTTCCAGCTACCTTAAGAGAGGAAATTT TGGCAAATGAGCCCATTCGCCAATTTTGGTGCAATTTGGTGGAATTTATT TTGACGATTTAATAAAATTTCTAAATTTGGCGAGAATTAATTTTTGCGAA CGACCCGATTTTGTTCAATATTTTAGCAGAAAAAAAGGTTTTTAGGAAAA ATAGAGACTAAATTGAAGGAAAATTAAATTTGGCGAGAATTTATTTTGGC GAATGACCTATAAATTTAAATTTCTTTCCGCCAAAATTTCTTCCCTTACC GTATTTAAAACTCTTCTGAGACTTTAATGAAAAATTAATGGAACGTGTTT CCTTCAAAAGAAACCGAGAATGCGCGAGTTGAAGGTCCGGGGTCTCGCCG TATGTTACGTTTTGAGATTTCACTCTTTCATCGCATCAAATCTTTTCTAC GTTTCTTATTCGTTATTTGATTTACACCCCTGTCTCACAGCCCCGATGGA ACTTTTTTCCTCAGTGGGGCTGAAATTTCAGGGTATTTTCCCACCGGGGA CGAAGTTTTTGTTAAGTTTTCCAGTAAGGCTGGGGTTCCAGCGGGTCTGT GACACAGAGGTGTGGATTTCATTCAAGATCCTGGAGGATTGTCATGGTTA CTTTTGTTCTCACCGAATGCGCATCGAATGAAATCATAAAACATAATTTC ATAATTTTCATTTGTTGCTTTTGTTATCGATATATCAGGTGAGGCGAGAT GGTCTGATAACTTTGATGATGAATACCAAGAGAGAATGGACATGATGAAC CAAAGAAGAATTGAAGGAATTGAAAATTATCGCAAAGCATTTTTGGATGA AAGACGAAGAGAATTGCGAATGAAAAAGTTCAAAAAATTCAACGGTAAAC CATTTCTTTCATATTTAAATGTTTTTCAACTCACTCAATATAACTTCTTC GACCGTAGTCGCACGGTCAGGTGCGTGCCACTTTATTATTTAANAACTCA CTCAATACAACTTCTTCGACCGTAGTCGCACGGTCAGGTGCGTGCCACTT TATTATTTAATTATACCCCTAAACTCAATCCAATCCTCTTTTTACACCTT TTTCTATTGTCTATAGGTGCGAAAGAAAGACTGGGACGGTTTTAGGGAGG TGAAATGGCCAAAAAAATGCCCGCGCGGCAATTGGCGGCTACGGTCGAAA AGGTGTATACTGCGGTTTTTTCTATCACGCAAGATTTTCCTTATTTTCTT TGCTCGTTATGATTTTCAAAGCTCTTTCAAGAGAAGAGGAGTTATGGTAA CACTTTCCTTCTCATGACACCCCCTTGGCTGATTCTGAGTAATTGATTTT GAGATTTCCTTAATTTCTTTTTTTTAAATTTATAATATATATGCTGTAAT ATTTGTTTATTTAAGATGACATCCGCTCGGAAATGGAAAGAAAGAACGCT GAAAGTCTTGAAGATGTGTACGAAGATAAATATTTCTCCTTAAACCCCAA TGTCAGAAGTTTAGTTTCAAAAAATGATAAACCCGAGGAAAACAAAAAGC CCGAGGAAAACGAAAAACCCAAGGAAGACGAAAATCCCGAGGAAAAGGAA AAACCAAAAGAAAACGAAAAGCCCGAGGAAAAGGAAAAACCCAAGGAAAA CAAAAAGCCCGAGGAAAAGGAAAAACCAAAAGAAAACGAAAAGCCCGAGG AAAAGGAAAAACCCAAGGAAAACAAAAAGCCCGAGGAAAAGGAAAAACAC AAAGAAAAGAAAAAGCCCGAGGAGAAGGAAAAAACCGAAAAAAGTGAAAA GCCTGAGGAAAAGGAAAAGCCCGAGGAGAAGGAAAAAACCGAAGAAAGTG AAAAGCCCGAAGAAAAGGAAAAACCCGAAGAAAGTGAAAAGCCCGAAGAA AAGGAAAAACCCGAGGAAAACAAGAAACCAGAAGAGACGGAGAAGCCTGA GGAAAAGGAAAAGCCGTTTGTTTTCCCATTCGGTAGGTTTTATATCATCA TTGAAATTAAAGCGCCCACGGGAATTTACACGACAGCAAATTATTCTTTT TTCCATGTTACATGATAGACAGGGTGCGTTTACACTGAAAGGCTTCCTTA ATTAAATTGTTATTATACAGGGTGTCCCTAATAAAAGTATCGAGTTTGAA CATGCGATTGAGTAAAAAAGTTTGTGTGTGTTATCGCTAAAATATAAGAA CGTTCTCCATCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNCCCCCCCCCCCCCCGTTTATTTGGAACCTAAGAGTAAGCTAA CAGGATTAATGTAATTTTTGATAAAACGATGAATAGCCCAAACTATTCAT ATAATTTTTGGATGAAAAAAGATGGTTGCACGTTAACTTTTTCTTTTCAG AAAATATTCTATTTCCCAAAACACAGGAGAAAAGCCGTTAAATCTTTTGT ACGCATATTTTCCGATTTTTCCTGTGTTGCTGTGGGAAATGAAATTCTTT TTTTCAAAATTAAACATAAAAATGGCCGTCAGTGGAAAAAACCATTGCTG TCACTTTTAATCGATCCTCCTTGATTAAGAGTCGTTAGCTCTATTGTCTT ATGGTAGGAGCACCCTTTAAAACAAAAGAAGCATAAACAAAGGATGCGTG CAATGAACAAGTTTTGCGATTTCAAACTCAAATGACTTGGAGAAAAAGGA TGTATCATCACAGTGGCTGCGTTTAGACCAGCCTGGCATTTGTAATTGCT TGCAGTATTCTTTTGAATTCTATTGTTCCGCGCAATTGTTCGGTTTGTCA AATGCCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNTGCTTTTCATTGTTTGATCTGTCAAA GTTGAACTTGAGGGAATCACCTTTTCAGTAATGACTCTAAAAAGACGATT CCTTAAATGCCATGACAGAAAATACAAAGGAAAAGATATTAAAATCGAAT CCCTCATGAGCAAATGCCAAATTACAAATGCCAGTTGGTCTAAACGCAGC CAGTGTTGCTTGAAAATTGCTTGTAAAATGGGAACAAAGAAGTGCACGAT TTTCTCCTTTTGTCTCTTATTAAATAACTTTGCACCCGGGGGGAGGCACT GGGTTTGCGGACTGACGGTATGTGCGGGCCAAAAATTGGCTTTTAAAATT GCCCCCCTACGGTGCAGCAAAAATCAGTGAAAATCACACCCTTAGAGTAA ATTTTTCCCCATATTTTCGATCCCTTTCGTGCAAAAAATGGTCAAAATTC TAGCATTTTTCGTCAAAATATCTAGATTTTTCAAGAATTTTCTGAAATTT CTCTAATTTTTCCGACCCTTACAGTGCATTTTAAACATATTGGAAAAGGT ACCCTTAGGACCCGCACATACCCGTCGGTCCTTTTGCCCAGCTGCCCCCC CCCCGGGACTTTGCACGATCGCATGATCATATCTCAAGCAACCAGTGTAT TCATCCATCATAAATCTCTTTGTTAAGGAAATTTAAGGAAATTACTAATC AAGGAAACCTTTTAGTGTAAACGCGCCCACAATAACGTTATTGAACATCA GGCGTGAAAAATAAAAGTCTTAATAGCTTAATATCTTTTTAAAAATATCT TTCACGTTTAGAACCGCAAATGGTGGAAATCAAGTTTAAAACTGAACATG TATCTCGTACTCAAAAGATGACAGCAGGTGGTTTGAAAAAGTTTGCTTGT AAAACAGTTGGATACCTCCGTTGTTTAGATTTCGGTAAAGGCCCAAAGGA TTGCTTTTTACATCGTCAAGAAGATGAATGCCAAGAAGTTCGTGCAATCC CGCTACCACCAGCTTTTGCTTTCAAAGATGAGTCAAAAAGATATGTGTAA ACGTTTAAATGATCAAAATTTAATACATATATACCCAGCATCCATTTTTG CCGAAGTACCCCCCCCCCCCCCGGGGCACCATACTGATCATATTTCTTTT TTCGGGCTCTGAACAGATCTGATAGATATAAGATTTCGTTGTTATTTTTG TTAGGAATTTATCTCAAGCAGGGTTTTTGGAACTTTATGGAATACTAAAA GCACGCCCCAATCAGCATTCAAGTGTATTATATCTTACACCCCTTCTCAC AGGCCCACTGTGACCCCTTGCAACTGGAAAAATCGGCCAAAATATCGTCC CGGTGGAAAATTACCCTCCAATATTTGTTCCCACTGAAAATAATCAAACA AACCAATCCTCACTGCGAAATATGATATGCTATAATAGGAGTGTGATAAA TTGCGTAGGTTGCGTGCCTTCATGGGTCGGAAAAAAATTCGTGGGTCTCG TAAAAAAATTCGTGGGTCGCGTAAAAAGATTCGTGGGTCCAGAAAAAAAT TCGTGGGTCCATGAAAAAAACTCGTGGGTCTATGAAAAAAATTCGTGGGT TCAGAAATAAAATTCGTGGGTCCTGAGAAAAATTTGTGGGTCCATGAAAA AAATTCGTAAAAAATAAACCCGTAATTTGAGCCCATGGGAAGAAATCTTT TTTTTTTTCAATTGCATGAAATAAGTTTGTTAGTAAAAATTGCACTATTT TTGAAAAAAAAAATATTTCTCTCTTTATAGCTAGGATTTCGTAATAAATC TTTTGAATACACGTTTTTTTTTTATTAGAACGTCTTAATTTTAGCTGAGG CTGGATGTGCCTATTTTCTCATCAATTTTCAGCCTGAAATGTTCTTATTG CCGTTCTTGAAATCGATTCGCTTAAAGTCCAATAAAACCTTTGAATGTCG ATATTGGGTTAAAAATCGAGTAAATTTGCTATTATTTTTAGATGAGAGGA ATAATTACAGTAATAATTGCACAAAATTCCTTTAGAAATCTAAAGATTTT TAAACGAATTTCGTCAAACTATTCGATTCTCAGGCTGGACATGTTCTTAT AATGTTCTTAAATTTTTGCCAAATTTCAGCCTAAATGTTCTTACAAACTG GGTTCTAATGAAAAAAAAAAACGTGTAGAGCCAAGTTTCTGTTCTATTGT ATTAAATTTAAAGTGTAAATTGTAAGATTAATATTCTGACACCTTATGGC TCGTGTCTTGTCGTGTATGTCATTTCCGTAAAATTTCTTCTTTTGATAAT TTTTAACGGTTCTAGGAAAATTGCCCCCGAGAAAACTGCCCCCCGGAAAA CTGCCCCCGGAAAATTGCCCCCCGGAAAATTGCCCCCTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003161TCONS_00003161Clytia hemisphaericatranscript
TCONS_00003160TCONS_00003160Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003160-proteinTCONS_00003160-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000025supercontigsc0000025:296540..303329 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.65 0.64 0.42 0.47 0.26 0.03 0.29 0.69 0.38 0.14 0.14 0.15 0.19 0.31 0.17 0.09 0.8 1.1 0.11 0.1 147.97 135.46 220.75 301.77 552.38 246.34 57.41 14.77 0.53 0.55