XLOC_001915 (gene) - C. hemisphaerica

Overview
NameXLOC_001915
Unique NameXLOC_001915
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000028:520312..528285+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001915 ID=XLOC_001915|Name=XLOC_001915|organism=Clytia hemisphaerica|type=gene|length=7974bp|location=Sequence derived from alignment at sc0000028:520312..528285+ (Clytia hemisphaerica)
ACTCGCGCGGCagttgtatttttttcataCGGTAATTTCATTGGCTCGTC CGCAAAATGTTTTGGTAGAGTATTCACGAACACTCCCTGACAAGAGGATA GCCATCTTGGGAAAAGTGGTCTGTTTAGAATATATTTatggttttatttt gatatataGCGTGTTTTAGAAGGCATAAATAGAAAGATTGGATGTTACAT TACGCTGAGAAGTTGTTTTTCTGAAGAAAATATTCGTTTGCGATGgtgtt tttttgagaaaatgtttcgGTTTTTTATGATGAAGCTTGGAGTGCCTTTA TTTTCATAATAGATATTAATTATCTTGGATATTCGTTTTGATATTAggca aaataaataataatacaaGATGTCTGATTTGGATGCTTTGAGGCAAGAAG CTGAAAATCTTAAGAATCAAATCAGGGTAAGCTTTATTTTTACTGATGTT CACTTTTATCACTCTTCCTGCTCGGCTCTATTTTCAATTAGCAAGTCGGT TTTCAGGATAGGTGTTTTCGAGCGCGTTTTGCTGTCACGTGATAACAGCA GCTGCGTGCGTCTTTTACACTGAAATCTCTAAACGAAAGAATATTGATCA CGTGTCATCACAATCGAATCTTTGTTCACAGCTGTCTCTCTCTTCACGAA AGAAAGTCAAAATGGCTGCCGTAAACTGTTCGGATAAAATTATATCGCTT TGATCAAAGTTCAAGAATTCTCTGCTTTGTCTTTCCCCACCCATTTTATT AAATTCTCTgcaaaaactttaaacttttggGAACTTCCTCAATTTTTAAA CCAAACACATTCAACAGTAAAAGGAATGCTGATGTTTTAAAAGCTGTCTG GGAGAATCTGTCTTTTAAAACCAATccatttttgtaatatttttaaagaG ATTTTTAAGATATCTCTTATTTATCCAGAATCCTTCCCCAAGCTTTCATA AGCTGTTGTAATACACTAAGTTATTATTGTACAGTGTTGCAAAAAACCGT TGGTGATGACTGGTATAGCTGGTACTTTTTGGTTTCAACTGgtcattttt aagtttaaattTTACTTTGGTGGGGTAAAAACATGAGATTGCCTGTTTCA GaagttttatatatatttttttttgtatcatCTCATAATGGGCCATTCTA TTTTTTATCTGTTAGCCCCCAACAAACGACATGAAATTTCCGTGGAAGAC GGCGTTTGTccacggaagaatatttcaatgaattagaaaaaagcccgcgc ggtcagcgattctataaaaagcgaccgcgcgggctgtctggggcatccag ggtagtctctcaaaaacaaataatacggaccccgggcacgcatcaaaaaa aacccggactgtccggggcataggcagggtcgtcaaatttacaaaatacc gtGGAATTCGGATACTgcaacctaaaaaaatcatgagATTCCAATACTTT TATGCAAGATTAAGTAATATTCATGGAACTCTGATATTTATCTCTGATGT CGTCCATTTAGGgagtaatgtttttttttctggaatggcccaatcatTAG GAGCACCCCTAGACCCCAAGCTTTCTTTTTTCTCGCTATGGTAAAAAAAT TTGTCCGAAttgtattttgaataaaatacaGTACGCAGAAACGCTGCAAA AAAGGTTTCAAACACTACAGCTATTTTTATGTGAAAGTCTGATTGTATGA TTGAATATTTATTCTATATCAAATTTTAGGATGCAAGAAAAGTTGCGCAA GATACCAACTTTGCTTCAGTaagatttgttttatttttcattcattcttt tATTCATTTCTACATTGCAATGAAAATATAATAGAAAAGATAAATTAAAG TCTGCATGACATGTTTCCATAATAGTGACTCTTATTCTTATTAAAACTGA TTTTAGGCGGCTGCAAATGTTGAAGCCATCAACAGGATACAACTTCGAAC CAGGCGTACCCTTCGTGGTCATTTAGCCAAAATTTATGCCATGCACTGGG CCTCTGACTCAAGgtaacattttctttggagcTTGGTATTCTTGTTAAAg agataaattaaaaaattgaaaatactttagaaaagaaaatttgattgcTC CCTAATGTAAAAAGACATTTACAAATTTTATTCTTGTAGTTGAATCATAG TCATTATGAAAAACCCTGGTCTGTAaggcttttaaattgatttgttttgc atagTTTTTGATCATGTGGTTATAAGATTAACTGATCCCAAGAGTAAACA ATGGTAATGTGAtcaaaaattatgcaaatcgcaacttgcctTTTATTTAC AACAAAGGAAAAGTTGATTACCAGAccaatgttttttataatgactatgg ttgAATTTAGATCAATCAGTTAATATGATTTCCTAAAAATCTtaagaaaa tgaatttgaagTTAAATCGTTTGGTGTATTTCTCATTACTGATTCTTTTG CAATTTAGGAGTCTGGTCAGTGCTTCTCAAGATGGTAAACTTATTGTATG GGATTCTTACACAACAAACAAGGTAAAAAATCCCTTATTATGTTTTTTAC TGTAtcaattatttttgtttgattttcgaGCCTTTATTTAGTTTCATAAT AGGTACCCTTTTTAGAAAAGTCCTCTCCTTACTCTAATATAATGAATAGT CGATAGAAAGGGAATAAAATACAAGAATAGATAATATACAAATTCAAACA CCTGGTCATCTTTTTGCACTTGCAAAAGCAAATACTTTTTAACTTTACAA AATCTTTTAACTTTTCAAGAATCAGATCCTCCCCCTCcagtttacttttt tattgccTGAATAAAAGTATACTCTCTGTCTcctaaagaaaaattgaata ggAAAGCTTTTACATTTTGTCTGTATTTCATTCATAAATCAATAAAGTGC AATCTCAAATTGACTTTATTTTCAGGTTCATGCTATCCCATTGAGATCAA GTTGGGTCATGACATGTGCTTATGCTCAATCAGGAAACTACGTAGCTTGT GGTGGACTTGATAATATCTGCTCCATATACAGTTTAAAAACACGAGAAGG AAATGTTCGTGTAAGCAGAGAACTTCCAGGACATacaggtaatttttttt attcttcaacCAGCTAACAGCTAGTAGAGTACAAAATTATTTTGCAAAAG GTTAAATTGTAAGCTCGTCTATGAACATTTGTTAcaatttgtattttgtt tttccattttcatGAGAGATACATTCTACATGCACTTTTTAGGATATTTG TCTTGTTGTCGGTTTTTGGACGACTCTCAGATCTTAACCAGTTCAGGAGA TACTACCTGGTAAGTCATCATTTTTTGCCAGTTATTAATTCTCTGAGGTG ACTAATAATCAAGTTTCTTAACAGGACGCCTAAGTAAGTTACATCTCTCT TAGAAATCAAATcaagaaattacaaaataataTCTCATCAAAACACNatg ttttttataatgactatggttgAATTTAGATCAATCAGTTAATATGATTT CCTAAAAATCTtaagaaaatgaatttgaagTTAAATCGTTTGGTGTATTT CTCATTACTGATTCTTTTGCAATTTAGGAGTCTGGTCAGTGCTTCTCAAG ATGGTAAACTTATTGTATGGGATTCTTACACAACAAACAAGGTAAAAAAT CCCTTATTATGTTTTTTACTGTAtcaattatttttgtttgattttcgaGC CTTTATTTAGTTTCATAATAGGTACCCTTTTTAGAAAAGTCCTCTCCTTA CTCTAATATAATGAATAGTCGATAGAAAGGGAATAAAATACAAGAATAGA TAATATACAAATTCAAACACCTGGTCATCTTTTTGCACTTGCAAAAGCAA ATACTTTTTAACTTTACAAAATCTTTTAACTTTTCAAGAATCAGATCCTC CCCCTCcagtttacttttttattgccTGAATAAAAGTATACTCTCTGTCT cctaaagaaaaattgaataggAAAGCTTTTACATTTTGTCTGTATTTCAT TCATAAATCAATAAAGTGCAATCTCAAATTGACTTTATTTTCAGGTTCAT GCTATCCCATTGAGATCAAGTTGGGTCATGACATGTGCTTATGCTCAATC AGGAAACTACGTAGCTTGTGGTGGACTTGATAATATCTGCTCCATATACA GTTTAAAAACACGAGAAGGAAATGTTCGTGTAAGCAGAGAACTTCCAGGA CATacaggtaattttttttattcttcaacCAGCTAACAGCTAGTAGAGTA CAAAATTATTTTGCAAAAGGTTAAATTGTAAGCTCGTCTATGAACATTTG TTAcaatttgtattttgtttttccattttcatGAGAGATACATTCTACAT GCACTTTTTAGGATATTTGTCTTGTTGTCGGTTTTTGGACGACTCTCAGA TCTTAACCAGTTCAGGAGATACTACCTGGTAAGTCATCATTTTTTGCCAG TTATTAATTCTCTGAGGTGACTAATAATCAAGTTTCTTAACAGGACGCCT AAGTAAGTTACATCTCTCTTAGAAATCAAATcaagaaattacaaaataat aTCTCATCAAAACACTAACCAATCATTCCAATGAAAAGCTTGTCTAATTA AAAGCAATCATCAAAAATATGATGAGAACTACTGGATGGTTTGTGTTTTA TCAGGAACTGCTTAGAGACTTAAAATATCTaccaatgtttttttctttta aattttagttGTTTATGGGATATTGAAACTGGTCAACAACTTACTTCATT TATTGGACACACCGGAGATGTAATGAGCATCTCACTATGTAATGATGACA ACAGAACGTTTGTTTCTGGTGCTTGTGATGCCTCTGCAAAGGTAAGTGAA ACTAAAGCAACATTGAAGCTGGGTGTCCACTGAAAAAAGTTCATCGTAAT TACCTGttgacaaaaaataaatccagactggaattaaaaaacgttttttt tgtgACAGAAGGAAAAATACAGTGATCAAAGTTCCTCCTTCTTCCTTCTC ACAGgaatttttgtcaaagtttttcgTCTCATTTAGAAATGGTTATTTAG CAAGAAATAGTGATTTTATTCTCTAGAATAATTCCATCAGAAAGAAATCT TGTATTAAAACTGTGTTTATGGCTGATGGTCTTGACGTTCatatatgtat ttttttttcaacctatTTTAGATAGATAAATATTTTCTCTGTATGATAGG CATTTTAAGAGCATTCTGAGTTGTTTTAAATTGACAAATTTTAGTGCTTT TCTAGCCAATCTAGGGGGTAAAAAATCTGAAGATTTTCTGACCCTCTACC ctaaccatggtggggcctgcaGGTATCACTGTATACCAAAATATCTCtat caagaaattttccgtctcacagaaaaaaaaactgaccactgaaaataata atCGATGTagaatgaaaacgttttcatttttcatcgtCGTATTTTTTCAC CCTATCGCAAATAAAGCAAAAGGTTTTTAATTCCAGACATGcgtctggat ttattttttgtcaaCAGGTATTTGCGATGAACTTAACATTACTTTACACC ACACAATTTTGAGAAGTGCTTTTTAAATACATATATACTAAGTACCTCTG AGCATAGGATTACAATATAATATTAGGTGCAGATTGTTTGccagttttga ttattttacctCTTTCCTATAGGTTTGGGATATCCGAACTGGAATGTGCA CACAAACATTTACTGGGCATGAATCAGATATCAATGCTGTTTCTGTAAGT ACACAGTATttaaagatattattttatGTATAGAAAGGAGGTGCATCCTC TATGCTGTTAAAGTAGAATAGGCACTACCAAAAAGGGAGAAAgttgttct ttattttcttgcattttcttTGACTTCCATTTCtacatttgactttttga aaggCTTTCTTTCTTCTCTCAAAAGGAATTGAAACAAGCTTGAACTCTGT GTTGGATTCTGTTTTACAATTGtatattttcttcctttcagtatttccca agcaacagTGCTTTTGGTACTGGATCTGATGACGCCACTTGTAGATTATT TGATATCCGTTCAGATCAAGTGAGTTTTTTAAATCATCTTTTTATtaaca aacaagaaaaattctgTCTGAATGAGAATGAtgtaaaagaaagaaagaag gaaGGATGATCCCTGCAATATGAACAGTATGGGCCCTAGAGTTAACTATT CTAGGAAAGGGAAATCATACCTGACACCATTGACCTTGTGCTCGCGGCAC AACAGAGCCATGGTGTATCAGTGACATTACTCAAGCAAGCATACCTTATA TCTGAGTAGGGTACCAATCTGCTGTGTAGAAGCATAACTTTCTCATTGAG CTGTATTCGATATTATTAAGTATTGTATTTTATTGGCTCTTGCTCTGAAC TAATTAATTAACCTTTGTTTTACAGGAAATGATGTGCTATTCTCATGACA ACATTATTTGCGGTATCACCTCCGTTGCATTCTCCAAGAGTGGTCGATTA TTACTTGCTGGTTATGATGACTTCAACTGCAATGCTTGGGATACGCTGAA AGGTGAAAGAGCTGGTGTCCTTGCTGGACATGACAATAGGGTTAGCTGTT TGGGTGTTACCGACGATGGTATGGCTGTAGCAACCGGTAGTTGGGATAGT TTCCTTAGAGTATGGAATTagacaaattttttcaattcataaaTCAGCTG CATTTTTTCATCCTCTCCTTAACTTACTAAGTCAATGAAAACGAGAACTT ATTGATCACTGGAGAATGACATGGTGAGCAAAGGAATGAATTTGCAGAAT TTTTATGTGAACCAATATAAGATGTGATGGAGTTGTTGGCAAAATGATGA CATTTTGCTGGACCCTCgctgcaaaatttaagaacctGGATGAAATTAAT AATAGCTGTATTTAACatgaaatgatgaaaattaCAAAACGAGGAGGCTT GGGACTAAAGAGAGGAATGCTCCAATACGAAAAGCTTCTCTTTTGGCacg aaatcaacaaaaaattagTCGAAAAATTATCACGAGATATTTTATGTGGA TACTATAAAGTGATGaagaaagagaagagaaaaatttcagaatattttac ttttatcatttttttttgtttttgattttagagGAAATTTGTAGGTTATT ACGGCATATCAGTATAAATCCACATTCATCTCTTCGTTTGCAATCATTGA CTCTCGACGGCCAAATTTGAATTAGATCTTTCGATCATTCTATACAATAC AGTCTGTGATTCTTGGAAACGGAAAAATCTAAGGCTAGATTACTCAATGA TTGTAAATATTAACTATTTTTCGGTTTTTTTCCTATGTTGGTTTTTTctt atgattattttttttatgcGTGAATCAAATTTTATTAGAGAGAACTCACC TCCGTTGGTATTAATTTATATTAGTGTTTAGCTAACCATTTGTGTGTAgc aaatatttttcactttcctCACAGCATATCCAAAGAAAAGAGAAGTATCT TCTGTTTTAAGTTTGAAAGATTCTTAACCTTCTAAAATTAACTAAAACTT CAAGTTTTGTGTCATCTCCATTTTAACTCGTTGATTACGGGTTCAAGTAA TGAACTATACTTAGAAAAGCGTATAATGATGTTTTCTTACTAGTCAATGG ATTATACATTACCTATGGGACTATTTTCTCTAAATCTTTTGTACATTTTG CAGATGGATCAGTTTCTAAATAAGTATGATTTTTTGGCAAAGAGATAACC AGCTTAAAAACACTCATTCGATTCTTCATATAggcttcaaattttatttt tgtaagcCTACAAAAAATTACTTCTTTCAATATTTAAAGGCATTTAGCAA GATCAGAGAGATTTTAGAAGTACAATTTCTATTATGAGGGATATTTTACT TATTAGAAACATAACAACTAgaataaattgtaaattttctttgaaCAAAT ACGTGTAAGTATACACTAAAACAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003433TCONS_00003433Clytia hemisphaericatranscript
TCONS_00003434TCONS_00003434Clytia hemisphaericatranscript
TCONS_00003435TCONS_00003435Clytia hemisphaericatranscript
TCONS_00003436TCONS_00003436Clytia hemisphaericatranscript
TCONS_00003437TCONS_00003437Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003433-proteinTCONS_00003433-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:520312..528285 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GNB1guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 isoform 1 Homo Sapiens
GNB4PREDICTED: guanine nucleotide-binding protein subunit beta-4 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
149.99 144.93 206.59 212.57 710.76 536.75 589.88 622.03 460.16 470.83 315.31 287.53 241.36 208.08 179.15 190.17 338.81 326.71 187.69 263.57 325.71 327.46 204.57 225.86 165.71 193.09 343.64 283.03 223.67 218.52