XLOC_001945 (gene) - C. hemisphaerica

Overview
NameXLOC_001945
Unique NameXLOC_001945
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000028:695491..705224-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_001945 ID=XLOC_001945|Name=XLOC_001945|organism=Clytia hemisphaerica|type=gene|length=9734bp|location=Sequence derived from alignment at sc0000028:695491..705224- (Clytia hemisphaerica)
GATACACGGGGACGATTTGGATAAGTTATCTAAACACATAACCTTTTCCT TGTCAAGTTTCCTTTACTTTTTACTTATTTCTTTCAGGGAAAAAATAAAT TATATTCAATTACAAAAAATAAAAAGAATGTCCGATTCGCCGGTGGATTC TGGGAACGAAATTGAAGAGGAAGAAAAGCTTTCGGATGGAGGTACCTTTA CATTCATAATAGTTAGTTTTGATGCCTCGTAGATGCATGAAACTTTTTAC CTGCGAGGTAGACGATATTATCGTCCGTTACAGTGATAGTACAGGAATTA TTATACAGCCGTTATGTCGGTGGACGGAAAAAAAATCGGTGATAAAATTT CGAAGAAACGGACGATACCAATTTGGCATAAAACGGTTTTGCGGTTTTAC TTGGACTAGGCAGTGAGACTTAGTTCCGTGGTGAAAGCCGCCAGATTGCA TGTTCGATAGTCCACATCGCCTTATGAAGCTCTTATAATGTTTTTTTTTT CTTAAGTTTTTGGTTCCTACAGTATTAAGCTCTTTTGATATTTAATTGCA AAACCTGTACGATACTTTGTCTCTTTTCTATCCCTGGGATATGTTCTGCG TATCTTAAATTACTTTAGACGTACAAACATTCGGGAGCATAAACTTACGG GAATTTATTTTACACATTATTTCTGGCATAGTTGACCGCCAAGCTCATTT TTTTCGGGTACATCTGGTATTTTGACTTGACGTAAAAATTCCATGTTCTA TCTCTTTCTTTAACAGAACCTGATGAAAAGAGAGTCGCACACATCAAGGA GGACGACACAGTATGATATTTACTTACGTTTTCAAGGCGGATTTTCACTC GTTTTTCACAAACGCTTTCCTCGAAATTGCCAACAAAAATCAAAAAGAAA GTTTATACCTAAACTAGCTTTTCATGTGCCATTGGAAAAAAATACTTAAC CATTGATACTTCTCTGAACTTTCTCTGGACCTAATTGCCGCAGTTTAGTA CACGTTTTTAATGTATCAAACTCTATAATAACTAGCAACCTGATTATTTG AAATGAGATGGTCATCGAAATGCTATTGATAAAATTAATTAATTATTTGC TAAATTAACCCCTAACTTGGCAAAACACTCGTTTTAGGCAAAACGAAACT CAAAACGCCTTTCGCCAGAATTAATTAAATATATTCTTTGATTTACCGAC TAATTTTGAATCTTTTCAGGACGTTGATTTGACACATGCGCGATTGGATG AAGTTCCGTCGTTAAGCCATGTCAAAAATTTAGAGGTGAGCTTTCAAATT GTGTGATACTAACCAAGGGACAAATGTTTCCCCTCCACTTGGCTACTTCG TATTCTCAAGCCTTATATAAAAATATACTCCTCTTTTGTAAGAAGCGGAA TTTTTTTCCATAAAGCTCTTGTTCGTAAATCTTTGGCACTTTGAGTACTT CTTTATCCTATTCTTATGGCAATATTGAGATATTAAAGGTCATTTACCCC ATTTTCACTACTTTAACCCCAATCTGCCTAAAATTCAGCAATTTCAGGCT CAGTATTTTTGGACCTACCTGGAGGTCTTATAAATTAATCGTTGTCCATT CGTCTGTCCGTCCGTTCGTCTGTTACAAGCTTTTCTCAATAATTTCATTA GTTCATCATTAGTTTTTTCTGATTTTTGGCACAAAGATAAAAATTGGTGA TGTCCAAAATGGGCTTTTCCAGAAAAAAAACCGTGCACCCCCTGTTGAGG AGGTCCAACCTTTTGTGACCTGCCCCCTTGGAATTCCAGGCAATTTTAGG ATCAAACCCCTCTGGAATTCCGAACTTTTAAAAATTTTCAATCATTACCC CCTTGGAATTACGCTTATTTTTGACGGATTTTCGTCTACCCTTATGGAAT TCCACTGCATTTCAAACCTTACCCCCTTGGAACGGAAATGGACCTCCTCA ACAGGGGGTGCACGATATTTTTCTGGAAAAGCCCAATGTGGCGGAGCCCG ATTTTCGAAAAAAATTCATTTCCGGCCGAAAATGCCGGAAAGGAAATATG CCGGAAAAACCGGTTTTTTGGAATTTTCTCGAGATTTCATCATTAGTTTC TTCTGATATTTTACACAAAAAAGCAATGCCCAAAACATGGCCGAGTCTGA TTTTTGAGAAAATTATTTCCCGACCGAAATATGCCGGAAATCGACGTTTC AGCAGATTTTCATTGGTCTTAATGGTGATATTTTTTNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTACATCG ATTGTTTTCTGAAACAATGGAAATACAATACTTCGCTCTCCACCGTTTCA TTCGATGTTTATCCAGAGTCTCTATAATAAATCCATGGTTTTAGTAATAC TTGCGATGATTCTTTTTCTTTTGATAGACATTATGTCTTCGGCAAAACCG AATCAAGAAGATTGAAAATTTGGGCAACCTGTCATCATTGGTTGACGTTA GTTTCTATGACAACCTGTTGACCACTATTGAAGGACTTGATGATGTGGTC AATCTCACGTAAGGGTATTTTCATTTTCCTAAAGAATTTTCCAATAGTAA TTTTCCAGGAATGAGCTCGAAATACAGCGCATCGCGTCGCGTATATCATA ATTATTTTAACCCAAATTTGTACGAGTCTCAATCCCTTACTTCATTTCGA AATGATTGAAAAACCTTCAAAGTTTTTTCCTTTTCATTTGATATGTAAGT TTTTTTACGTGCAAGAGCAACTAATGTAAGGGAGGATGGGATTGGAAGTC GTACAAACGGGTAAATTTGTGCAAATATGTTACCATTTTTAGATTCACAG CGGTACCCTATTGGAACGAAATGAGTCTCCTTGACAAAAAAAACAATGAA ATACTTCAATATTAGACACTCGAAAATTCGCCAATTTCAGGGTTGATATA GTCTAATCCAAACTATAGTTGCAAATCACAGACAAGGAGAAACCCTGTAA CACTACTTCCTCTTTAAAACATCCATAATTATGCTCTTTCTAGCGCAGTA TATCTTATACACAGACAGATGCTTTCTTTTCTCTGCAGTTTTTTGGACGT ATCATATAACAAGACGAAGCGTATACAAAACGTTGAACACTTGACTAACT TAAAGAAGCTGTTCCTCATAAAGAATCGAATCTCCAGGATGGAGAACCTC TCCACCCTCATCAACATCACCATGCTTGAACTCGGTTCAAATCGCATTCG TGTAAGAATTTCCTTGACCTTTTTCTATCTTCCTTCGTTTCGGGCGTAAA CTCCTACTCGTCTAGTATGGCCTACACGCCTGGAGCCGTCTATTGTGTAG ACCAAGTCAAGGCCATTGTTAGCCTAGTTAACTAAGCCCGTACTCGCAAG GCTAGGACACATGGCTAATGGCAATATAGCGTTTTCGGCGCTTTAAAGAT TTTTTGTATTTACAGATTTTAAGTTTGCCTTGGAATGCTGTTATTCAGTC ACAACTTACCATCAAATTTATCCTAGTGACTGAATGAAACTAGTTTAGAT TTCTACTCAAGGCCATTGTAAGCTTTGTTTTCTTCAAATTTACAGAAGAA AATGTTGAAATTTAACAGAACGACTCGTTGGGTTTGTTGGTTCATTTTTC TACTTCGGTGAAAATATGTATCGTATCGGAAACCTGTTTTATTACTAAAA TGCCCACTAAAGTTGTCAGAAAGCAAGAAAAAAACAGCTGTCACACGTGT TTATTGTTGATGTTTTTGTTTTTGTTTTGCAGAGGATTGAGGGTATTGAA ACATTGGTCAACCTTGAAGAATTATTTTTGGGACAGAACAAAATCACCAA ACTGGAAAATTTAGATTCATTGCAAAGTTTAAAACTGCTGAGTATTCAGG TAAAAAAAAATTTTTTTTCAATCTATAACTCTGTATTACTTTTAGTTGAG TCTCCAAAGCACGAACACGCATGCACGGGGAACACAAATTTATTCGAATT TTGGAAATTTCGACTTATGGAGCCTTATAAGGCATTGCGGAATTGTTATC TGAAGGGACGAGTAAACTTTTTCGAGTTAAGAAGATATTCGAGTGATAGT GGTTCGAGTAAAAGAAAATCCACTACAGTGGAACCTCTAATTAGCGGACA ACATCGGAGAAAGGGGTTAGTTAATAGGTTAGCTAATTAGAAGTGTCCGC CTTTTAGAAACTTTTGATCTCGGAGCTCCAATTTTGAAATTAGGCCATCC CAGGGTGTCGAAAATACAAAATTGTGGTCTAAAGTACTNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNCCCCCCCCGCTAATTAATTTTTCGAAAATTTTCC ACCCAGGACATTCTTATTCCAACCCCCCCCCGGTTATCAATTTTTGGGGA AATGTTTTTGAAAGTTCCCTCTTTTGTTCTAATTCTGCTGTATTAGCCTC ATTTTCAAAATATTTCCACCCAGGACATTTTTATTCCAACCCCCCCGCTC ATTAAGTTTTGAGATTTTTTCCAACCCCCCGCTTATTCCAACCCCCCCCC CGGCTATTAGGTACCCGAGACTAATAAGTGCTTGAAATAAAAATATCTAA AAATTTTTTTTCGAATTTGGACGTCTGTGACCCGTTTGATATTCAATGTC TGCTAATTGGAGAGCTAAAATAGGGGTTTTGGCCATTTCGTGCGAAAAAA ATTGTCCGCTTATCAGAGGGTCCGCTAATTGAGTGTCCGCCTTTTAGAAA CTTTTTTATGAGGATTTGACTAGGAAACGGCCGGGGAAAATGAAATTGTC CGCTAATCAGAGGTGTCCGCCTTTTAGAAACTTTTTTATGAGGATTTGAC TAGGAAACGGCCGGGGAAAATGAAATTGTCCGCTAATCAGAGGTGTCCGC CTTTTAGAGTGTTCGTTAATTAGAGGTTTTACTGTATATCGTTTTAAATT CTTACCATCGTCATCAATGTCTTACAAAGTCTGTATAATTTCTTATTACC TCCATAGTTTGTATCACCACATTTGTTTTGCATTCTAGAGCAATCGAATC ATCAAGATTGAAGGTTTGGGAAATCTACACAATCTAGAAGACCTTTATTT GAGTCACAATGGAATCAAAAAGATTGAAAATTTGGAAAATAATGTAAGGA TTTCATAACAACACCTGAAGCTTGAAGGGATACCTCTGAACGCCCCTTTT TTAAACGCCCCTTCAAATAAATAACTTTACTTAAGGGAAAAGAATGTTCA ATTAACGTCTTGATAAACTCCCCTTTCTCCCCTTCCTCTCCTTTCCTCCC CGGGTTTATTTCGAGCAAGCAGTTCGCATATGACGAATGTGACGATCTGA CCTGGTCGTTCAGACAGAACATTCTAAACTGCGTCGCATTCTGCTTGAAA ACAAAAAATGAATGCAAAAGCAAAAGCGAAAGCGAAGGCGAAAGTGACTG GGTTCTAATGTTTATGTTTATGATCGAAGTTTGTTTTTTGTGTGATTATT TTGCTTTAGTCAATCACCGCGCTCCAAAACCCAAAACCCAAAACCCATTT AATATTCATCCAAAATATCAAAGCGGTCTGCCAACTCTAGCAGATTCTTT TACGGAGCAATGACCTTTAAAGTGTACTCTCCTGTACCTAATAAGCCCCC CCGCTGCCCTGCTTTAAAAAATTTTTCCACCCAGAACATTCTTATTACAC CCCCCCCCCCCTCATTAGTTTTTGGAAAATGTTTATGAAAGTCTCCTCTT TTGCCCTAATTCTTTTGTATTAGCCTGCTTTAAAAATTTTTTCCACCCAT GACATTTTTATTCCAACCTCCCTCCTGCTTATTTAAAGTTTTAAAAATCT TTCACCAACCCCGCTTATTCCAAGCCCCCCCCCCGCTTATTAGGTACCCG AGAGTATGTGCCAGCACGTCATCAGTCATCAGAATCTACATTGAGATTAT AAACGCTCCTGCTAAAACAAAAAAAACTTTATTCGAAGTAGTCGGTTTAA AAAGTTTACAACCTTCTTCTTTTGGACCTACCCCGGTGGGATGGAGGTCC TATAAATTAACCTTTGTCCGTTCGTTCGTTCGTTCGTTATAAGCTTTCCT CGTGATTGGCTCATTAGTTTTTTTCTGATTTTTTGCACAAAGATGTGTAA CTATAAACCCTCGAATGTGACGGAGCCCGATTTTCGAGAAAAAAAATTTT TTGGCCAAATTTGGTCCAAAAAACGGCTGAAAACGGGTTTTTTGGACTTT GTGAAAAATTGGATCATTAACTTTTTCTGATTTTTTGCATGAAAGTAGGG TACCATCATAGGTAAAATATGGCTCAAGCAGATTTTTTCAAAAAAATTTA GTTGGCCCAAAAAACGCATGTTTATCTATTATTAAGCATACATCAATGTT CTTAGTTAAATTACTCAATTTTTTTATGAAATATATATTTTTTTGCTCAC GAGTGCTTGCTTTTGAAGAATGTGTGTGATTAGACATGAAATTTTGGTTT CTTGGCGTGTTTTTATAGAAAAACTGGCCAAATTCGATATTTATTTATAA GCACATTATCAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTG ATTCTTAATGATTTTTTGCATAAAGATGCATAACTATAAACCCTCGAATG TGACGGAGCCCGCCTTTCGAAAAAAGATTTTTGGGCAAATTTGGGCCAAA AACGGCTAAAAAACGGGTTTTTTCGTCTTTGTGAAAAATTGGATTATTAA CTTTTTCTGATTTTTTGCATGAAAGTAGGGTACCATCATAGGTAAAAGAT GGCTCAAGCTGATTTTTTCAAAAAAAATTTGTTGGCTCAAAAAAACGCAT GTTTATCTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGCC AAATTACTCAATTTTTTGATGAGATAGATGTCTTGAATATGCATGGGCCC CGGCGAGCCATTTTGAGTGAGAGGGCCAACATTTTAGAAAAAAATGTCGC CCACCATGGTTGGGCGACGAAGAAAATGTTTCACTTTTTACACCCTCAAA ACACCTTAAACGATATCTATTTGGGGAGAATAATAGTTTTTGTGGTTTGA TTTGATCTCAAACCAGCTTAAAATAGTAACTTTTAAAAACTTATGACATG GTCTACCAAAAAGTGGGGGGGGCCATGGACCCCCCGGCCCATGATATGAA AGAATATTATTTCAAGAGCATGAAATTTTGGTTTCTAAACGTTTTTTTAA TAAGAAACAAACGACTAATTCTGATAGATCGTCACTATTTGTGTTCTGAA TGATTGTTTAATGGTCACGCTCACGTAGATATCAATTATATATGTGTTAA ATGCGTAACCAGGTAGGTCCATAAAAGTATCACTTGTTCCAAGAACTCTT TATCTAGATTTTAGAAAAGGAGATTCGATGTTTTCATTCTACATTCTTTA TCTTTTGTTTCAGAAAAAATTATCGACTTTTGACGTTGGTTCCAATCTGA TTGAAGAGATCGAAAATATTGAACATTTAGAAGAATTGTCAGAATTTTGG GTATGTATTAAAGAAAACAAGATAACCTTACATCCATACACCCCTGTCTC ACAATTTTTAATCATTGAATTTCAAATGGGGGTGAAATCAGAGTAAATTT TCCAGTGGGGCTAAAATTCTAGGGTATTTTTCCCACCGGGGACGAAATTT TTGCCAAATTTTCAAGTGGGACTGAGGCCCTAGCGGGTATGTGACACAGG GGTGCATCCATTAAATGTTTTTGTCGCAAGTTCTTTTTCAAATGCCCCCT TGGTTAGACTGTCAGCATCTAATATGTTTCTTATAACAGAAGCTATTTCA AGAGATGCGTAAATTCCAAAATCCTTATGGTACTCTTATTTTCTCTCTTT AGTGTAACGATAACAAAGTTAGTAATTGGAACGGCATTGAAAAACTGCGT CCCTTGAAGAAATTAGAAACAGTTTACTTGGAACGAAATCCGTTGGAACT TCAAGATCGATCAGGATACCGGCGGAAGATTTTACTCGCATTACCACAAA TCACACAATTAGATGCTACCATGACCAGATAACGTCTAGAAAACTTTGAA TGAATTTAGCTAAACTGTTAACTAGCTCTCACTCTCCCTTGAGAGAGTTT GAACCATTTGCGGAAGAAACATCTAATTACTTAACATAATCATGACATAA TGTAGCCTGGCCTTCAAAAAAGATCTCAAATATTCTTTTAGGACTAGCTC CTGGTATTTGGCATTATTATTAAAATCTAGAGGAACAACTGTTTCAGTGA CGCGCTCTATAGACTTTTAGTACGTGGTATCATAAGCGAATTTCTTACCA CGAGAAAAATTTTCCTGCAATTTTATAGCATTCATTTGAGTCGGGATAAT TTTGGAAGTTCAAACTTGAAAAAAAAAATACTCAGAATCTGTAGGGATTT CCTGTCTTGTGTGAGTGTTGAAAACAATTGAAAACGTATGAGATTGGGCA AATGTTTTGTAGGGTGATGAAAAAGTTGGGGTACATTCGATCTTCCCCTG AAAATATGGATCACTTCACAAAACTTTTTTTCCCCGATGAGGTATTTTAG GGTCATTTATTCATATTTTGCACTTTGTACATATTGTTATATAAGAATAT GTTCGTTTCACTTTAAAATACATTTTCGTTTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003500TCONS_00003500Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00003500-proteinTCONS_00003500-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000028supercontigsc0000028:695491..705224 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PPP1R7protein phosphatase 1 regulatory subunit 7 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
102.78 96.44 123.67 119.66 19.84 15.51 34.67 35.39 38.8 29.39 27.48 30.87 31.13 25.09 28.76 29.3 45.79 53.48 23.22 29.39 43.73 42.69 45.24 42.2 35.76 39.03 17.71 11.02 21.12 21.06