XLOC_002095 (gene) - C. hemisphaerica

Overview
NameXLOC_002095
Unique NameXLOC_002095
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000031:742369..751020+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002095 ID=XLOC_002095|Name=XLOC_002095|organism=Clytia hemisphaerica|type=gene|length=8652bp|location=Sequence derived from alignment at sc0000031:742369..751020+ (Clytia hemisphaerica)
CTTTATTGATGTGAACAGGGCCTTCGGTATATTTAATGACCacaattttg
atttgaatagtaaattgagaaaataaaataaagatactTATACTAGATTA
GAAAATAGCTTTTGTTATTGAAAGAAATAAGTTGGTGATTGTTTTAATGT
GTTATAGTGAAATGAATGAATTGGTTTACAACAACAACATTGATGATGAG
ATGAGTTTATAAGCCTCTTACCACAACAGACCAGCACAGGACAATATAAC
AAACTTTCTTGTTTCTTTGCTGAGACCATTCCACTATATCAGGGTGAGGC
AAAAACAATCAAGGTGCGGCTGCAGTACATTTTCACTGAGTATTTTTACT
TTTAgacttttttgtcaattttctttaATAACAAAACCCTAACTAACTCT
TATAACTATCATTACATTTTACAACAAAGTGTTTTTATCAGGGTAACTCA
AGTGGGTTTTGGCCATTGactttcaagcccgaagggctagactcctGGAT
GAGAAATGAAGCCACCTATTTTACATCCAGAACGTCtacgcgtagttttt
acacaaacgccgagttgaaagtaaaatctatcgctagatttcaagaattg
cagtcctcaaaaacaaattaACCGCTAGATACagtccgtcgtcatgattg
cggcgcgttctggatgggaaataagtggcttcacttttttttgcctgggG
AAAGTTAGAGATtttactctagcccttcgggctttaaactcgatgGTTTT
GACCATCCTAGGTTATAGATTTGAACGTAATTCCACTTCTACCTCTTTAC
CAGTATCAagtttctttcatttatttttgtCCAAGCTGACATGATCCAAG
TAataaaaatagtttcaactgtGCAATAAGAGAGCTTATGAATGATACTC
TTTGTGTCTTTCCATGTTTAGTTTTGTAAGCTTCCAGGGTGTTCTGCAGC
AACGTTAttattgaaagttgaaaatgatcCGTTTGAATGGAATGTTGTGT
AATAGTGGCTGTTCTTTCTGACATGCTTTGATGTAGGACAAAGGCAGTTG
ACAGGACTGTAACGCCCTAAAACCAACTTCGAGCATGCATGCATGCTTTG
ATGTAGGTTGGTACGACTCCACTGATGTACAAGGTTTTATcgacgtccat
ttaacgttgaTGGATATGTTTAAAgatgttatatggacgttgaaataacg
ttatATAAATGTTAtgaacgttatatggacgttgtgataacgttatatgg
atgttgttgGCGTTACATGGACGTTGAGATAatgttatatggatgttgtt
gGCGTTACATGGACGTTGAGATAACATTGTTCGGAGTTGAAGAGAAAATC
TGCTTGATGTAGGTAGCGAAGGTTAGATTAACGGCTGCTCTTATGTTGAG
GTATCAGCATTTCAAgctcttgttttgaaatatgaagtGTCAGattaaaa
ctttgaatttaCTAAGCTTTAGAGTCATGTACAGATTTCAATTTCATCTT
TGGATTATGACGTTGGTTTATGACGTTTCTTTATGACGTACATTCCTTTT
GACGCAATGACTTTTTTCTAGAATCGCGTGTTAAATTTAACTGAGCAGTT
GGAATTCCCCTGAAAATTTGTCATGTCAAGACAAATTAATAAATTAGCAC
TTCTTACTTGATAGCCTTGGTAATTAAGCATTGCATTATCAGAAACATCT
TCGGAAATCTTAACTCGGTCGAGACTTGTagcaattatttatttttctaa
aatggtATTTAGAGTGAGCAAAGATATCCTAAAGCTAGCTAACcgatttg
aaaaagaaagttttaaaaattatcaCCTTTTTCCTGCTACATTTCTTCAA
GAAAAATGCACAAAATGCACCGTAAGGTTCATATTCAAATTCAGTCAAAT
TTGACTAACTTTTCTTTGACTGTAGGCTTCAATTTTGAGATCAAAATTTT
TGTCCGCACATATGGTAAATTTCAGatcgagtaccccctccccgACTAAA
GGGGATCAAAATTGCTGCCGGAGAGTGCTTCTTTTTCCTTTTAAGGAATA
CAAGAAATGTAACACCCTCCATCGTAAATTTTGAGCACCCTTTAGATCCT
GAACATTTGACCTCGCTTTCTGATAGTCTAGACATAATTCTCTATACACG
TGATGCGGAGGTTTAATATTAGAAATTGTTGATAAAATTGTTTTGTGGAT
AAAGGTTATAAAGCTGTATAATCtaataaaatctttctttgatgGTTTCT
GTCGCGTGAAAGAGTTTCCTTTGCACGAGATAACATCTTTTTGGTCAGTT
TTCTGGTCAGcctattttttctcttttgtcaGAATTAAGCTTGTAATGAG
GAAAttccaaatataaaaaaacatgttgatgtttttcctctttttagtAT
GATGTTGTGGCGATAAGCATTGTAAGCTCAGTTTGGTTGACGCTGTGTGC
TTTTGTGGAGCGTCGATGCTCGTGgtcaaacttgttcgagttaaggagac
attcgagttatagaggttcaagttaaagagactccactgctTTTTACACG
TGAAAGAGTTTCCTTTGCATGAGATAACATCTTTATTGTCAGcttttctc
ttctctttctGGTCAACCTCTTTTGTCAGATTTAAGCTTGTAATGaggaa
attccaaaaatgaaagtaaccataatgatgtttttcctcttttcagtaTG
ATGTTGTTAGAAATAAGCATTGTAAGCTCAGTTTGGTTGACACCGTGTGC
TTTTNTCTGGTCAACCTCTTTTGTCAGAATTAAGCTTCTTGTAATGAGGA
AAttccaaatataaaaaaaacatattgatgtttttcctctttctagtATG
ATGTTGTTGGAAATAAGCATTGTAAGCTCAGTTAAGTTGAAAGTGTGCTT
TTGTGGACCGTCGATGCTCGTGCGGTCACTATTAAACTTCGAGAAATTag
aattatagaggttcgagttatagagactccgcTGTATTTTGCATTATATT
TATTCAGTATTTTGTTTTCGCTGGCACAAAGACTGAAATTGGAATTAGAG
TTCGCTTCATCTGTTTTCTTATTAGCGGGTTTATGTATCTACCTTTTTGA
GGACGGCAGAGTATCTGAAACGATTCGGAACAACTCAGTCATTCGGGATC
TAGAACTGGGCCCACgccttgaatttgaaaatggagGGTCTAATAAATAT
AGAGTCTAAGTTTAATCTTCCCTGAAATTTTAACTTAGCATAAAAGTGGG
GGGGAGCGGGGCATGGCCTCCTGCCTCCCCCCGGTTGCGTGGACCCTGTA
GAACAAATTAGAAAGTAACCGTGTCCATCGGAGCAAAAAAGCAAAGATAT
ATAAACACTCTACTATTACTTCAGTGAGAGGCTTAATAGGCTAGCCGCTG
TATCGAGAAAATATAAGCATACTttataaaaaggaaaagaaTGTATTTTA
CTGTCGTCATGTTACATATTTACTTTCCCAACAATTTTGCTAATGGCGGA
ACGTGAAACATTTTGGGTCAAGATAATTGACCTATGAACCTCTTTATCTA
AAAATAGTTCgaggaaaatgaaatttttggttAAGGTGGCGCCCCCTCCC
TTCATTCTTGGGTAAATTTGTTCGCCTACGTTTCAATTTACCTGACGCCA
CGTGTAGTATCATTTTGAGAAACGTAAAacatgttgttttttataagaac
atccaaaatttttgaagccttcgaatgttctcaacttttttagttttatg
cctaaaaaatgttcttaaagtattcttattttcaccaattttttgagcat
ttgtgtgctatttcctaagaaattgggtgttttatgTTCTGTAAAGcttt
ataatgttcttaacttgctcttgatattttggctatcgaaaccttatgtt
cttatatagtttgttcttgtaaaacaTGTATGCAATATCAATGATTCTCA
TACCACAACTATACCACGAGTTTTCAATCTCTTCTTGATTGATTGAATGA
GAGGTTGGATGAATTATAAGTGATCATTTCCTCTTAAGAGTtgcgagaga
aaaaaattctgatCATTACTAGTAGTACATATGACAAAATTTCGGTTTGT
TTACGTTTGGACGTTCATAGTTTACTGTAGTCTTTATCGAAAATTAGAAT
TATAAGCAAGTTTTACTGAAGTCTACTATTAATTTAACTCGGATTATACT
TTAAATTCATTTAAAACTTGATTCCCTACTATGTCTTCGAGCTGTAGGAA
ATGGTAAATGGCTGATATTTGATATTTGGATAGACTGGCTTCAGTTCAGA
GTCTCTCTCTCTGTGTTATGTGAAATTACAGTGTTTGTAAAATTGAATGA
GGTAGCTAAGTGTACGGTGGGGAGGGGGAGGCATACGGGTTTCACGGTGC
GGCggtattagctttttttttctctgtcggtgtttcggtgtttgaagaaa
agaTGACGGTGtttcggtgtcaaacatgccatgcggtgacaaaataagga
aattttctTGTCAGTCAGGTTGATGTAAATGatatgcgtcggtatttcga
tgTTAGTGATCCCTGTTCGCCCCCCCCCCATCGGTGCGATTACAAATTTC
AAATCAGTTGGAGTAACTATACCCACCTGGTACTAGTTTATACAGAGTTT
TAACTTTAAAGCTTTTTGTAGGGTCCTATATTTGTATTTGGTCTGAGCTC
AGGTTACTTGGACTTAAATTGATCTCTGTTTGATTGTTGACTAGTTCTCA
TCGTTAGGCATAGTAAGACAGGGACGAAAATATATATAATGACCTAATTA
ACATCCAGCTTTATTATACCTTAACTTTGAATAGTTTGTTAATAACGATA
TGCTCCACCCAGTAATTGAGATTGGAAAACATTTCTTAAATCACTGACAA
GTGGCCAACAATTAACAGATAACTGATCACAGAATATTACTACTAGATTT
TTGGCTCGGAATTGACCTGTATTGCTTGCTTTATTGGCAAGAACGTTACG
TAATGACATCATAGAATTAAtggtaattgtttttttttgcttcagtTGAA
CAAActacacaaagaaaaaaaatcaaacaaacaaaaaataaaaaagaagt
gaAGGAAAAAGAAGACTCTTGGCAAGTTTTCTACACAAGAAATTAAACTG
GATTCCATCAAAAGATACTTCAATAACTGTAAGTAGTAGCTTTTTGTTCA
TTCGTCCCTTTGTCCACTCCTTCCCCGACTCCTTTACTCTACCCGTTTCT
TTAAGGCCCTGCATTCTTTATTTTCGTTTATTCGTTCTTTTCACTCTTTC
gttattttctttattcgtTTGTGTTTTATTCTTTccctttttgatttctt
cattCATTCGCTCTTTCAGGGGTAGTTCGTTCGATATTTTGTTGCCCTCA
TTCTTTCTTCCAATTCATGACTTTTCATTTTCGCTCTATTTTTTGACCAT
CTCTTCGGTTCTTCAATCACTCGCTCACTCATGCTTGCTGTGGGGATTCT
TATTATGTTCTCATATTTTCCTAATAGTTTCTACCTACCGCACATTTTTT
TCCTAGGGGGAGGAGGGATAGCCACTTCagggggtcttgacccctctagg
aACTATCTTTGTCCATTTGCTTCCTCCTTTCTTCTTGCTTTCCTCCTTTC
TTCTTGCTTTCCTCCTTTCTTCTTGCTTTCCTCCTTTCTTCTTGCTTTCC
TCCTTTTAAAAGTTACATCTATGTTATGCAACAcaagttttcaaaagaaa
ggAAATGTCCTGCTGGTCTTATAGTTAATATTGTTGACTCAAATTaagct
tgtttactttgaaagccAGTCGTCGAGACTTGGCTTAAAGTCAATGTTAT
AAAGCTTAAAGGAGTATAAAAGCTTTTAAAGTTTAAGAACTTTCCCTATC
AGTGTGGTATCAGGTTGGGCGGTATTAAGTGAGAGCCTTTTGTCAATACA
GTATTCAATCTAGAGGATTTCCTAGGTTTGAAATAAGTCAACATAAACAA
ATGTAATGACACGCGATGGATTCGAACCACATTCTAGGTTTTAAATCAGT
TGACTTGTTTTAGGCTAGACGATGTTACAAAAGGGTTGATGCGCGAGAAG
AAATATGGTGCGTGTGATTAAAGCCGTTTATAAGTTTATAGCGATATAAC
ACGGTGGGGCTGTTACGGAAAAACTCCGGTCTCGCGTTATTAGATGAAAC
TCATCTTAGGGGGCCATTTTAGGTTATATTATAGTTTTAGGAGAACTAGA
GCAATCTGTATTGCTGAATGAATCTTTAGACTGTATTCGCATAGTATGTA
TGCGGGTTTAGCCTCGTGACTTCATAGCATGATCGTGTATATGTGTAGGA
TAGCGACCTCCGCTTCGtacattcaaagaaaaaaaatcgtctTGTTTTGA
TCACATGATTggaagtatttttttcattgatgagtcaattaacaagaaaa
caaaccCTATTGCACAGTGTGCGCAATTTTCGTTCCTCAATGAAAAATAG
TTCCCTCTATTCACATTGACGTCAGTCTTTCTATTTTCTGACCAAATACT
AGTTCATAACCAACTGAGAACGCTCCGGGGAGTATCATATAAGACTGAGG
CAGTTGCGGTGAAAAGGATAAACCAACAAAGCTACCTTTGTTTATGTGCA
TAGAGCTTTATAGCCTTTGTTTTTATGCTTATAGCTTAGACTGTAATCAC
ATTACGAAATTAATTAGATGTAAGGTGACATAGATAGCGATAAGATCaag
ttttattatatttttcaagtttgaacatgCTTTGAAATCAGATCAAAAGT
gatatttattcaaaacaaagtggACTTTGTGCGGTGTTGACAGATTGATT
TATACAAAGACAGGAGCTTGCAGAAACAGATTTTTGAAGAGCAGAAGAGA
AGAGATAGCTAGGGTATGATGACCGTGTTGCACGAAGTATTTAAAAGATG
TAAGAAATTCTTTCTATATTGTAGCTCTCCACTATTGTTAAGTCAACATT
GCATAAGAGCCTGAGAATTTCCTTCCTTGGGTACCTCTTGACTTTTTGAC
ATCCGATTTCAAGTACTGCAGGTCTTTTTTCCCGTATATACCTGACTGGA
TGATAGTGAAAGCAAatttattttatcattctatttGAGCGTTTAGAAGA
GTATGAACTTGCTGAAATATTAATATTGTGCTTTTCAACTTAGCGAAAAA
ATAGACGTCTGTTTGAATGATTGGGATGAATATTCTCttactttgaaaaa
tttatcaagatttttttatagACTTGTGTCCAGGCTCTTAAGTTTACTTT
TCATTATTCTTGTGAAAGATCAGAAATTTGCAAggtcataacttattttc
tttttatgtttgtttttcAGCTAATATCTACTCCAGTGAGATGTCTACTT
TGAACAAATCCGGATCAGTCAATTACGGAAAGATTGTTTCATTCGGGAAC
GCCCTAAGCAAAGGCGGTGACGCCCTGAACAAGAAATATGAGGTTAAACG
CCAAACCAGTTTATCGGGTCCTTCCGGGTTGAGCAGCGGGAATCGTTCCG
GTGTTTTATCGCGACAAACATCACTTTCGCTTACCAAGAAGTCTGGGACT
AGCGTTTGATTGGTTGTGTTGTTGGGTTTTTATGTTGATCCTATTCTGAC
GGAATTGTATGGTAATTTTGGGAATTCTTTTAATCAGCTAATCAAACACT
TTCGACATTCGACCGCAGAAACTGGAAGATCCTTAGGATCATACGCTAAG
TGCTTTATGTGATGTGCAGCTACCactgtagtctagcaagctagacgact
aattcagacatattagaaataaagcaaaaaagtaaattttagtcgtctag
aaacctttgtgcactaactccaaacaaaaaNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcta
cgcaagtttctgcgtagctaggcccggtatctataaggctggaacaccgg
attcttccagtcgtttatacaaactaaatcccgtatctttatttgtgttt
attattagtattacatgcattataaacgactccagtctactacCACTGAG
GCAAAGGTCAAATCTCAAAATTCAGTGTTTAAGGAAAACAAGCACTTTTC
TGATTAGGTTTTCTTAAATCATCTTGAGATTGTCTCTTTTTCCATAATAT
CTTCATTAGAGACGGACATCTCAAAATCCGATTTTAACCTTTTGCCTCTC
ACGGCGATATGTTCCTTGAATATATTCTGTAAATTAtcaacctccccccc
cc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00003758TCONS_00003758Clytia hemisphaericatranscript
TCONS_00003759TCONS_00003759Clytia hemisphaericatranscript
TCONS_00003760TCONS_00003760Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000031supercontigsc0000031:742369..751020 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.36	0.35	2.39	2.05	9.32	5.67	14.55	15.97	25.21	15.04	14.94	24.77	57.24	47.02	15.73	11.28	21.18	28.01	96.18	83.99	54.15	55.67	19.02	22.13	28.68	20.06	9.79	11.07	5.35	7.26