XLOC_002934 (gene) - C. hemisphaerica

Overview
NameXLOC_002934
Unique NameXLOC_002934
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000051:607504..615387+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_002934 ID=XLOC_002934|Name=XLOC_002934|organism=Clytia hemisphaerica|type=gene|length=7884bp|location=Sequence derived from alignment at sc0000051:607504..615387+ (Clytia hemisphaerica)
ACCACATTTGTACCTTCACAAGTTTCAACTTGTCCATAAAAGGAACGATC CATATGGAATCAAAATGCAGAGAATGGAATCACTGTTATGAATGGGCTAA GAAAGAATAACCCTTTGTAAAACACCCACATGTCTTTGATTACCGGTGAG CCAAAAGTCGGTTAATTTAAACTAGCAGGGTGCTTTGATTAGCAAACAAA GCATCTCGCAGTGAAGGAATTACAAACCCTCCGAAGCTTCGCCTATATAA AGTTCTCATGAGTGTAGTGAACCAGAAAGTCAAAGTATTCGAACGGACAA ACAAGACTCAAAGTGTGGAAcatcaaaatatcaaataaagaaagagaaat gttgaaaatgtTGGCGTTGACCTTTTGCTGGATTGGGATATTGGAAGCTC ACTCATGGATGACCTGTCCGCCGTAAGATCATTTTTATCGATCGATGATT CGAATTCTCCACTAGATGAAAGTAATGCTAGAGTTCAAGGGTTTGTTGTT GTGGTCTCGCACAGAAACATTCATTGCACCAAATTGGTTTCATTGCTTGT TTTCGTAAACTTTACTTTATGGGTTCTCTTCCTTTTGTTCTTCAGATCTT TTGATAACAAAGTCATTCAAAGAGGAGGTATCCAAGGCAATTGGTGTGAG ACACTCAGAGGTAAGTTTTTTGTCCTTATATTCATCCTTCAATTTCATTC CAAGAAATTTAAGTCCGCTGAGAGCTCCTTTTTCAATAGCTGATTTGTCT GAAATTAAGAAAAGGACATTACTTTTCGCTTGAGGTACCGAAACAGTTTA CACCTCATAAAATGTATTGATTGATTTTAGGTGGAAGTCCAACGACGCAC GTCAAAGCTGGCGACAGGTTGAAGGTGAATTCATCCCgctctttttttcg aaaaattttctttgtcacTCATTGAAATTTATTCTACATCTTTTTCGAAG TAGGTAAAAAATATGCTATCAATTAAAAtaccgggtgtctctgaaaaaac tcccccctgtttgattcaaaagtgcgaaaaagtgaaaaaatatattagct tgattttttcgaaatcgtttagaggagggtttaacttaaattttggtata tcaaactttaaaattgcgaaaaaagacgaaaaaacaggATATCAAATCTT TTGTTAGAGAAAAACACACTCAAACTTTCTCTTCTCCACTCAAATAGACT CGCTAAGCTTTGGAAACTTTTGGaaacattttgataaaagtttgttGCTT GTTTAAACTTCATGCTCATTAATGAATCCAAAAGGAGCTCTAAATTggca ataaaaatcattaaaacgaataataaaacaaaaaagatgtACAGAAgttc aaaagtaaaactttacTGTCAATAAAGTACAGTGTTTTCTTGTCTAattt gataccctgttttttcgtcttttttcgctctttttgaaaacaattttttt actctttttgatttgtcataacttttggtctaatgaagcaattttaaagt ttgatataccaaaatttaagttaaaccctcctctaaacgatttcgaaaaa atcaagctaatatattttttcactttttctcaattttgaatcaaacaggg ggaagttttttcagagacacccggtaCGTAATCAATTAGTATGTCTATTT ATCTCTTTATTACAATTAAGGAGGTCGTGGTtgattgaaattaattttac tCTGATTATTAGGTTGGATGGACATCGAACAACCATGCAGGAGGTTGGGT TCGAATTTCGTTAGTGCCATGGGGGTGGATGGATTTGGATGCAGGAGATA AAGAAGTGGAGTTGAAAAGAAACGTGATGAAGATAGCGTGCTATGGTCAC GATCAACGTGAGGGGAAAACACGGAATGGTGATTGCGTGCATCCTTGTGA TGGGAGGCCTGGTTGCGATTATCAAGCTGGTCAGTATTTTATTCATGCAT CAGCGCTTTTTTGTTTGAGgaggaattttcctttttccatACATGCATCA TCCTGCAAATACTTTTTGAGCTCCTTTTCACAAGTCTACATAACCCTAAA AAACTAGATACTATAGAAAAGCGAACCTTGAGAAACGGTAGTCTCGAGCT CTGATTGGCACTAACCTAAGCAATCGAAACTGTTTTCAACCATTCATGAT TGCAAGAAAACATGAATTCCAACCTAGGAGTTTCATACACACAATCTTTC TACATCTGGATACTGCCCTTTGATTTGTAGAGATAACGTATAAGCTTCTC CCACCATGAAGTGACTTGatcaaattgaaacaatataTAAACCATTTTCT CCATCCCTTCTAGACGATAAAGACATTCATCGTTTCGACACAACAATCGG CATCCCTACCAACCTTGAAGACGGTGATTACGTTCTCCAAGTCACAATGC TTGTCGGTAACACCGGAACACCGTACAACAGTTGCGGGAGGCTTCGCATT TCCGGTGGTAACCCGAACTTCGATTGTGTAAACAGTGATCCAGTTTTGGT TTATGATTGTTTAAAAAGTGGAGGACCAAGACCTGAAAATTCGATCGGCG TTGGTAAGTCATTCTTCACCAAAACATTATGTGAAATTATGTGAATACAA CTTTAACAGTTAGATAACCAGGAACATTTTTGGTCAGGCTATCATTACAC ATCTCTCTCTATAACGTGTGAGCTTTCATAAAGACcgctaaaaattttct ttggcaCGTGGAGAAGAAGTTGTTTAAAGTTTCTGAGCTGAGGATATTAG AAAGCGTGTTTGGGAAGCCAACACAAGCACTTAATACTATTCTGACGCAG TCTTACACTCTTTCCATTGTAGGGACGAAGAATGGAGATTTCTGTTACAA TCTGGATGGCACAAAAGGTTCAATTGATGCTCGCATCTCACAGATTCCAA TCAATGTGGAATGCGACGCTCGATTGTCGTGTTTGAACAGTGTCAAAGCG GCTGAATGCGCCAAAGATCAAACTATGGGTGAAATCGTGGTATGTTTTCC TCTATCTTAAAATAAGAGAGAGTGAGTGAGTGCCCTAGATATTATTCTTC CAGTAAGCGTCCATAGGGATAAACCAAGATCAGCGGAGCTCAGTTAGCTC AATTGAATCAAACCAAGTGAAGCAGAAATGTCCTATCAACTTGAAGTAGA AGTTATCTCAAcctttttctgttgtttttttggCACAGGGCGCCAGAGGG CCGTTTCCGAAGCATCCGGTATGCCGTGCGTACAATGTATTGGAGAAATT AGCACCTTCGTGTAAAGATGGCTTGAAGAATGGAGATGAAGAGGGCGTGG ATTGTGGCGGAGAGAATTGTGGGGCGTGTCCAACCGATCCCTCCCCAACT GTTCCTGCTACTGCTTACTATTCGTAAGTTTGCTTTGCTTTCATTTGTTT AAGCGAATAGTTTTTTATGGTTGGAACTTTCTTTGAGTTTCATTTGTTTT AACGAATAGTTTTTTATGGTTGGAACTTTCTTTGAGTTTCATTTGTTTTA ACGAATAGTTTTTTATGGTTGGAACTTCTTTGAGTTTCATTTGTTTTAAC GAATAGTTTTTTATGGTTGGAACTTTCTTTGAGTTTCATTTGTTTTAACG AATAGTTTTTTATGGTTGGAACTTCTTTGAGTTTCATTTGTTTTAACGAA TAGTTTTTTATGGTTGGAACTTTCTTTGAGTTTCATTTGTTTTAACGAAT AGTTTTTTATGGTTGGAACTTCTTTGAGTTTCATTTGTTTTAACGAATAG TTTTTTATGGTTGGAACTTTCTTTGAGTTTCATTTGTTTTAACGAATAGT TTTTTATGGTTGGAACTTCTTTGAGTTTCATTTGTTTTAACGAATAGTTT TTTATGGTTGGAACTTTCTTTGAGTTTCATTTGTTTTAACGAATAGTTTT TTATGGTTGGAACTTCTTTGAGTTTCATTTGTTTTAACGAATAGTTTTTT ATGGTTGGAACTTTCTTTGAGTTTCATTTGTTTTAACGAATAGTTTTTTA TGGTTGGAACTTCTTTGAGTTTCATTTGTTTTAACGAATAGTTTTTTATG GTTGGAACTTTCTTTGAGTTTCATTTGTTTTAACGAATAGTTTTTTATGG TTGGAACTTCTTTGAGTTTCATTTGTTTTAACGAATAGTTTTTTATGGTT GGAACTTTCTTTGAGTTTCATTTGTTTTAACGAATAGTTTTTTATGGTTG GAACTTCTTTGAGTTTCATTTGTTTTAACGAATAGTTTTTTATGGTTGGA ACTTTCTTTGAGTTTCATTTGTTTTAACGAATAGTTTTTTATGGTTGGAA CTTCTTTGAGTTTCATTTGTTTTAACGAATAGTTTTTTATGGTTGGAACT TTCTTTGAGTTTCATTTGTTTTAACGAATAGTTTTTTATGGTTGGAACTT CTTTGAGTTTCATTTGTTTTAACGAATAGTTTTTTATGGTTGGAACTTTC TTTGAGTTTCATTTGTTTTAACGAATAGTTTTTTATGGTTGGAACTTCTT TGAGTTTCATTTGTTTTAACGAATAGTTTTTTATGGTTGGAACTTTCTTT GAGTTTCATTTGTTTTAACGAATAGTTTTTTATGGTTGGAACTTCTTTGA GTTTCATTTGTTTTAACGAATAGTTTTTTATGGTTGGAACTTTCTTTGAG TTTCATTTGTTTTAACGAATAGTTTTTTATGGTTGGAACTTCTTTGAGTT TCATTTGTTTTAACGAATAGTTTTTTATGGTTGGAACTTTCTTTGAGTTT CATTTGTTTTAACGAATAGTTTTTTATGGTTGGAACTTCTTTGAGTTTCA TTTGTTTTAACGAATAGTTTTTTATGGTTGGAACTTTCTTTGAGTTTCAT TTGTTTTAACGAATAGTTTTTTATGGTTGGAACTTCTTTGAGTTTCATTT GTTTTAACGAATAGTTTTTTATGGTTGGAACTTTCTTTGAGTTTCATTTG TTTTAACGAATAGTTTTTTATGGTTGGAACTTCTTTGAGTTTCATTTGTT TTAACGAATAGTTTTTTATGGTTGGAACTTTCTTTGAATGTGTTGTTAGA AAGGCGAGGTAAAAACTCCCATTCACGATCggaaataaaatcaataaacg tTGTCAGGGATGAGTCCTAGGCTTCACAAAACCGAATGGAAATAATAATA AAGgagtcaataatgtaattatCATTTCAGCTGGTTATAAATAAATGTTT GCACGAGACGagaaataattttcctttttttttatttcgctTCAGAGCTA TCGGTCAAGTGTCACAATTGTGGTGGGGTAGTGGGCAGATCACCATCAAA GTGTCCATCAGAAAAAGAATCAGCTCCTCGCAATGCTGGCAACTACTTTT ACAGTTCCGAAATACAATCAAAATGACAGCCCATGCGTGGGGCGATGGAA TGTTGGTCAACCAAGGAGAAGCAGGTCAGAGCTTTTTCACACCTTCTCTA AGAAATTATGGTTAAGGATCGAAGAACGTGCTCGAAATAGATGAACAGTG TTCATTTCTTTTCCATGCAAAGCCAGCATCCTTTAAAGGTTGAAATTCGA ACAGGATAACGTCCAACTAACGTTATGAAACGGGCGTTAGTCAGACATTT GGCTTTGTGCCAATCGTGGGAAAACATGAACAAAAACAACATTCAtacct ttcttttttttaaagggcGTACAATGATTTTCGAGGCGTCCAATCAAGGG CGGTCATGGTCGAGCGGGAGCACCATATCAGTAACTTTCCCAATCAACAA AGGATCCATCAATGATGATGAATGGACGGATGGAAATATGAAGTTCAATT CCGCCATCTTTGAAGTATTCGACGATACAAATGTATGTTGACGTTTCTAC TCTAAATAAAAAATGGTTCATATTTTACTATTACAGTATTTAGAAGTGAT TTGTTactcaaattataaaaatgtgtCGAGACAAAATTGTCTTGATAATG ACTGAAAATTCCACACCTTCAAAACAAGcaactcaattttcaaaaatcct tggtgatttaaatttcaaaattttcacattttcatcATACAGGAATGTAA AGGCATCAAAGTCAACCCAAATTGAGCAatggaaaatcttcaaaaataat tcaaagattTGATGCTACAGTAGTACCTTTTTTGTAATAACTTATTTTAT ACTATTGattattttaagaatttatatgtcggtgttttttacacttttgg cgaaAACGTGACattgaattttctaaaaaacggtttttcttgaataataT AAGTTTCAACAAGGATTTTGGGatgaaatcttccaaaaaggNACTCCAAT TTAAAGCGATTGAAGTGGTGCACCCAACCCCAGCCCCAACTTTTCGCAAA ATGGAATTATTAATCCTTTGGGGCTCTATCTGAGCTTATTTTAAGGCATT GACGTAACGACATATCACGTATAACGTAAAAAAATCAGTTTAGAACCTTG TAGGATATTTCATTCCAGACTAATATGCTCATTTTGGATAAGACAAAGTA TGCTTCTTTCAATGAAGGATTCCATAATCCTTGGATGCTCTACTCTGNTA TGAACTTTGGAATTATGAGAGTTACGTGGCTCTTGGATTTATTCTGATGG TCTCAACATGTCACACGATCTCCATATTTTATGAAACAATTATGAAGAGC TCTTTTGGATCCGAAATTCCATCCGGAAAACATCTCTGAACTTGAACAAT TATAAAAGAtacatttcatcgttaaaatggGCTGATTACAATCTAAAATC AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNACTCCAATTTAAAGCGATTGAAGTGGTGCACCCAAC CCCAGCCCCAACTTTTCGCAAAATGGAATTATTAATCCTTTGGGGCTCTA TCTGAGCTTATTTTAAGGCATTGACGTAACGACATATCACGTATAGCGTA AAAAAATCAGTTTAGAGCCTTGTAGGATATTTCATTCCAGACTAATATGC TCATTTTGGATAAGACAAAGTATGCTTCTTTCAATGAAGGATTCCATAAT CCTTGGATGCTCTATTCTagtggaaaattttattttcgtgGTCTTAGGGA CCCAAACCTTCCAAATAGTTAAATTCGAACTACTTAATGTCAAATAAACA TACTCCAATCCTCAGTTCAAAAAGACTCAAACTNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNcattatatcaaaagttattgctcTTG GAATCCATAATCCATTTTCATTATGGAACCGTTTAATCCTAACGTGCTCC TAACTTTAAGAGGTTATAAGTACTAGCTTAGTTTCTCTAGAAGGCTCGGG GAAAAAGGAATGGAATCTTCAATCCTTTGCCGATCCCCTGATATCCAATT AAGAAAAAGTgcactttgtatttatttttaaaaagtgttttaaaaaactt cacgttttcgccaaaagtgtaaaaaacaccgacataTGTGGTATaaatga taatattttttaatttttgaataaaaaatctttc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00005145TCONS_00005145Clytia hemisphaericatranscript
TCONS_00005146TCONS_00005146Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00005146-proteinTCONS_00005146-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000051supercontigsc0000051:607504..615387 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.06 0.34 0.2 0.55 0.74 0.33 0.46 0.19 0.19 0.3 0.17 2.28 5.25 0.06 0.25 86.07 85.49 0.46 3.04 5.6 6.02 0.03 0.2 0.18 0.46 0.03 0 0.08 0.05