XLOC_030566 (gene) - C. hemisphaerica

Overview
NameXLOC_030566
Unique NameXLOC_030566
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_14:542162..549260-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030566 ID=XLOC_030566|Name=XLOC_030566|organism=Clytia hemisphaerica|type=gene|length=7099bp|location=Sequence derived from alignment at scaffold_14:542162..549260- (Clytia hemisphaerica)
AACCAACGAATCACAATCAAGCAAAGATATAAAACATCGGTGAGAATTTT CATTGGATAGTCTTGACGACACTATCGTCTACACAAGGTCATTAAAAAGG GAATGATTTAGGACGCGGGATAGATATAATAACATTTTGGTATGCTCAGG GCAGAGTAAACGTCGATTCTCTCCTCAATTTTTCCGTAAACCGTCTATTA CGGCTTAGGCATTTGCTCATCCTCTAGCGAAAAAATAGTTTATCATCTAC AGAATTCTGGGATTCAGGCTAATTACGACTGTATACTCCACGCATCAAAA TTTTTTACGGATAGTCATGTATCATGTATCATGTATACATCGAAACTCCC ACTTTGGTAAAGCATTCTTACCTCAACCCTATTAGCCAACGAATATTATT GAATACATTTTAGGCTAAAAAAGAGCAGAGGATACCGCGCACTGCATTTT GGGCAAATGAAATAGCCCAATCAGGGTAAGTATGTTTGTCCTTGCATTTC TTTGTTACATGCATGAGAGTGTGAAATACAGTTTGACAAATTCCAAAAAA GGCTTGATTATAAAGTTTAAATTTACTTATTTTGGTTATATTACTCTTTC CCCTTAGTGGACACTGGTCATTCTCTGGCATCACCACATTGCAATCAAAT GACACAACGATAACAAGCAGTGTTCATCATTTGACCAGTTTCGCTGTTCT TGTTCAAGTTACCGATTTTGAGGTAAATGTACAACTATTTTTAACAATCA AGCTGCTAGTTTTTTACATTTGAAATGAGCATCCAAATTTGAGGAAAACA CAGATTGAGCAGATTGCAAAGTTCAATATCTCTATGAAAGGCTATCTATA CGTCTTTCAGGGGTTCAAAGTTTAGATTTTTTTACCATAGATTTCTGAAG AACACCAGCTTGCTTTGTCCATCATCACATACGTGGGTTGTGGCTTTTCA TTGTTCGCTTATCTGCTGACTTTTGGAACACTTGCTTCTATCGAGTTAGT AAAAAAGTCTATTCCTTACTACGCGTCTTAAAAAAGATTTGACAGAAAAA GTAATTCAAGCCACATACTTTATTAAAGAAGTGCAAAAGTGCTGGAGGAG GCTTAAGTGGGGAGGCTTAAGTCTCCCCAGTCTCCCCGTTTCCGTCGGGC TTCTAGTTTCATTGCTAACGTTTCATTTTCTCTATCGAGTTAGTATGAAT CGGCCCTGCCCTATCAATATCAAATAGATTATAGAGAAAAATATATAACA ACACATTTTTTCCTAAATTTTTGCAGGGCCTTGGCATCAGAACGAAGTCG TGTACATTTGAATTTAGTTCTGGCGCTCGGTATTGGACAAGCTATCTTCC TTCTTGGGATTTCCGCGACTGGAAATACGGTAAAATACTTATTAGTTTCT ATATTTCAACAAAATCTCCTTTTGAAAAGTGACTCCAAATGCTTTATACT CTATTTAAATGTGGAATTCTTACAAGCTTCTAAGCTCTGGTTTGGACGAC CCACTTTTCACTCTGTCTATTTAATAGTTTGCTGATTAAAGTCAATGCTT TTCCATCTTTGACGACAGTGCAATGACTGCTTTCAATCTTTTTCTAGAAA AGATCCAACTTTCTTCTCACTTTTTCCTTACAATAACAACAAGAAGCCGA AGCGGCATGAAGGCCCAGCTGACGTGGCAATAACCAAATGTCGTTTGTAT TGGGTATATACCTTAAGAGAACCAATGTTTGAGGAATCGTATTTTCGCAA TTTTAGGGTTTCAAAGAAAACATCGAATCTTAGAATCCTAATGCACACAT TTTCGGCAGAGATTGAAATACAGAACATTCAAAAAGTTAAAAAAGTTCAA AAATTGGCTGAATAAAAAAAAAAAAAAAACCAGCTGCGCTAATAATAAAT GATACGCAATATATGTATATAATAGATTTACTTTATGTTTTTGTTACTAA TATGAAAGAAAAAATCGGTTTAAATAAATTCGCAAACTTCAAATGTCAAA TGTTGACCGTCAAAGTTCAGAAATTTCGATCTAACGCGTAGCACCATGAA AAACATTTCCAAACTTATTCAAATTTACACTCACATGAGCTGCATTTTAG TATCCTTTAATGAGTTACAGCATAAGTTTACTTGAAAAAATTCTCTCTGT CAGGTTTGAAAAATCCAACCACCGACCATATTGAGAGCGCGATAGATCCA AAATTTACCATTTTCACAGATAGCATCATGAAAAACATTCCAAACTTATT CAAATTTACACATGAGCTGCATTTTAGTATCCTTTAATGAGTAACAGCAT AAGTTTACTTGAAAAAATTCTCTGTCAGGTTTGAACAATCCAACCACCGA TCGTTGAGAGCGATAGATCCAAAATTGACCATCTTCACCGGTAGCATCAT GAAAAACATTCCAAACTTATTCAAATTTACACATGAGCTGCATTTTAGTA TCCTTAAACGACTTACAAAAAAGTCTCTGTCAAGCTTGAAATATAAAACT CCAACATCCAAATGCTCCCACTTGGTTGGCAGACGATATCATACTCCAGG ATGCAAGTGAAATTTTTCAATCCGCGGACCTAGACGGGGGTTCGGTTATT ATCAGTTAGGGTTAGGGTTGGAGCTCGAGAGTTACAATATAAGGCCGAAG GCCTTCTTAGGGGCGTTTGTACCCTGTAACTTAACTTAGGATCCCGTAGG GATCCTTGTAGGGGCACCGGTAGGGTTGGGAGCTTTCTTGATTAAGGTCT GTAAATTACACGCTATAAGTATTTGTGAATGACAGCTCACTGCCGTGTCT CGTTGGCGTAAGCGGTTAGGCGTTGGGTTAGTAAAGCAAGGTTACTTGCA TTTGGTGGTTCGAGCCGGGGTCGGAGACCTGTTTCACCGGTACGGCAAAT TTCAGAAAAATACTTAGAAAACAGTTAGGAACACTTAAGAAAGACAGAAA ATCGGGATAGTAGATAGGAAAGTAGAAAATAGGGGGGAAATAAGAGATGA TGCATCCTGGAGTATGATATCGTTTGCCAACCCTCCCACTTGCTCCTATT TACACATCTACTGTATGTATAAAGAGAATGAAATTTGACTTTACTACCAA TTCAATCCAATATAAGAGTAGGTCAAACATTGTGTGGGTAGGCGAGGCAA AAATTCTAAATCGGCCGCTGGTTTAGCCTGGACTACTGGACTTGTTAATT TATTGCGCGCACAGGCTCCGACAAAGCCAAAATCTTTTNNGAATAGGCAG GATAAAAAGTCAACCATATAAACTAGAGCTTACTTTTCTATCCAGGCAGT ATGTACTGGCATTGCAGTGAGTTTACATTACTTCTTCACGGCTGGTTTCT CCTGGATGCTTGTTGAAGGTTTGGTCCTCTACTCCAAAGTGGTTCGTGTT TTTCACAATGGGAAAAACTATATCAAGTACTATTTGTGCATTGGTTGGGG TAAGGAAACATTTGTATTCTTCCTTAGACTGGCAAACTAATAGATGAATT AATCATGTCAGAGAGCGGACACAGTACGGCTGCAGGCGTTTGCTAAATAG GAGTGTAGGAGAACAATGGAAGTTGGTGCGAGGGTTCTGATGAACTAGTT TAACTAGCTTTCAGCTTCTCCCGCCCAACCTACACTCACTTTTCCTTCGT GATATCTTTCAAGCCCAACTGGCGTGGTAGTCTAATTTATTTGTACGTTT CACGTACACTTCTACTAATGCAAAATTTACTTGATTAAAATAAGATAACT CTTGCAAGCTATTTGCTTGAGTTCAGGACACGTCTTGAAGCCTTACTTAT ATAATCAGTGTTGCAATTTCGATTTTGAAAGGGTTTGTTGGCTATACTCT CAGCCCTATTGGAAAATCTTTGAGCGTTTAAATCCTGAAAGCCTAAGGTC CTAAGTAACCACGTTGAAGGGAATTCCCCTTTTTCTCAATTATCATTACT TTGATTGTGGACTTTCTCTACCTTTTCCAGGTTTACCAGCAATTCTTGTT GGTATTTCAACAGCAATAAAGTCGGATGGTTATGGGAATGACCGATATTG TTGGATTTCCATTGAAGATGGTCTTGTATGGGCTTTTGTTGGTCCCGTTG TCGCAGTGATTCTGGTAGGTTCCATTCATAAGAAAGAGATCCTATAGATG GATAGGGTCGGTATTTTACGTAATCTTGGACTTTTAGTTAGTCTGTCGAT TATATTTCCGTGGACCGTGGGGTGAACGGCCAGCCGGCTCGGCTATCTAT GAACTGACTGTAGCAAGAAGGAGCAGAGGTTCGAATCAGGAACCCTCGAT TTGATTAAGGCGATAACGCCTGGAACCATTTACTCGACCATCTTAGCCAG GTCTCCACTAAAATTCTACGTTCTTATTGCGTATTTTTCGACTTCAACTG AGAATTTTATGTCATATATGCGTTAAAGGAATTATTTCTGATAATGTCTT TTTTACTTGGTAGATCAATTTGTTTATTTTGGTTTGGGTGATCAAGATAT TAATGACGTCAGTATCAGGGCCCGTTAGCACTCATCCCAAGACGAAAGAA CAAATCAGGTAAAAAAATACCCTAGAATGTAATGGGGATGAATGGGGATG AGTTTACGGCAGTTTTATCACCAGAGATAATGATTTCGGGTCAACTCTTT AAGTATAAAGGGGATTCAGCTGGGTATCTAGTGTAGTATTGGGGAATTGA AAGATAAACATTTTGCCAAACTGAAAATCCATGGATCATCAATTTAGTTC TAAAATAAATACCACGAAAACCTCTAATTTGTTTATACGTTGTCTTTAGA GCTGCAATCAAAGGAATTCTAATGTTAACACCCATCCTTGGAATCACTTG GGTCTTCGGAATGTTTGCTGTAGATTCCAAGACAATAGTGATGCAATACA TCTTTACTATATTCAATGCGTTTCAGGTGACTGCTATCTTATTTCTCACG TCACTTTTCTCATTAATTTGTTTGATGAATATGATTTTTCAAGCAATTTG TTTTGAATGAATCTCTCGTGCTAAAAAATGCTAAAAACAGAAGACAAGGA AAAGAATTAAAGGAATTGATCATTTTTCAAAAACGAAGCTTCCCCGGGGG GGGGGGGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNTTAGGCAAAATTGGGTACGGGACGTGTC GCTGGTCAGGGTCCCTTTTTTAGGCTTTGAAGATATCTGACAGGGTCCAA ACCTACTAATTTTCAAGATGTGTATCTGACAGGGTCCACTTTTGTTTATT TAGACAATTTTTCATGGTAAAAATTAGAAAAGTTTTCAGTTTTTCGTCTA CCTTTTAGTCATTTTTTCCACTTGTTAGGGTGGAAATTGGAAAACCTTTC AATTTTTCGTTCTGACAAGGTCACCATTTTACCAAAAATTCATATCTGAC AGGGTCAACTCCAGCGGCATTTTCCCGCCGGCCGCCAAGGTCAATGCCCC CCCCACCCCCCATAAGCTTCCCAAGATCGAATTTGTACAATCATATAGTT CTTGGATTAGAATTTATTAATTTCTTTCCTCATAATATCATTGCAGGGAT TGGTGATTTTTGGGTTCTATTGCATTGGCAACAATGAAGTGCAAACAGCC CTCAAACGTCTTCATTTGAAACACACGGAAAACTTCACTTCATCTTTGTT CAGAAATACCAACACTACATCTGACTCCATTGAGGTTGGTTTTGTTTGTA ACAGAGTTCTAACATTCGAGATTTTTGTGGATTGCACGAATTCAATTTTG TCTTTCTGTTTCTAAATTTACAAATTATTAAAAGTTTTTCTACACAGAAA AAGCTACACTGTGATGTTTATGGTATACTTTGATTCATTTATACACCCCC TTCTCACAGACCTGGTAAGACTTTTTCAGCCAGTGGGGATAAAAATAACG GACTGAAACTCGATGGGGATTAATATTCCAATATTTTTTATGGTTGAGGA TTTCAATTCTTTAGTTTTCAAGTCAAAAGATTCAGTGGGGATGGGAAAAT AGCATAAAATTTTACAGTGAGGATTAGTTTATTCGATTATTTACAATTGG GACAAAAGTTAGAGGATAATTTTCCACCGGAGACGATATTTTGGCTAATT CTTTCCAGTGGGAAGGGGTCGCCTAGTGGGTCTGCGAGAAGGGGTATTGA GAATAAAAACACCTTTGTGAATATTTCTACTGTAGCTTTCTACTGCAAAA CACAAGAAGAAGATGAAATCAATCCAAACAAAAATCGAAAATTCGCCACA AAACTCACCCTCTTCAGGTCAGTAAAACTTTGCAGTGTAAATTAAATAAA TACTTACAAACTATTGAAAAGAAAGAAAAAGCCTTAAGATTTGCTTTGCA ATCAGAATAACGTTTTAGATTTACCACTTTGTTAGTTTTTATGCAACATA CGTTTCGAAAACCTGGCGATATGTTTTATCAACAATCTAGCGTTTGTATG AAAACGACGTGGGTCACGCGTTTAGGATGGCAATTAAGTGGCTTTATTTC CCATCCAGGAGTTTCGTATCTAGCCCTTCGGGCTTGGAAGTTAATGTAAC CAATGTTGTCAGTGTTTATTATATTTAGACAAAAAAATTGGATCGTCTCT TTTACTCAGACTCCCTTTGCTATTCGGGACCTCAGAGTATTGATCGTTGC ATTTTGAAAGTGTCGTTGTCAAAAAGCGCAAATTTTATTGTTTTTTTTTT CAGGATCGTTAAGTATTTGTTTTTGTAAAATCAAACATTTTTACTGTTTC AGGATTTGGGTACAAAAATTACAGATGAGTTAAACAAATCGTTGTTGTGC TCGAAAATTACAACGATCATTGGTAAAGCATAGGAATAATGATTTATCAA ACATAACATATACGTATTTAACTTTTAATTTATCAAAGCCCAATTCAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048037TCONS_00048037Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048037-proteinTCONS_00048037-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:542162..549260 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GHRHRgrowth hormone-releasing hormone receptor precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16 0.13 0.07 0.04 0 0 0.08 0.16 0.27 0.51 0.07 0.35 2.75 3.39 1 0.26 0.9 1.33 8.23 8.28 1.67 1.79 0.82 0.78 1.75 1.34 0.04 0 0.11 0.15