XLOC_030777 (gene) - C. hemisphaerica

Overview
NameXLOC_030777
Unique NameXLOC_030777
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_142:488645..496461-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030777 ID=XLOC_030777|Name=XLOC_030777|organism=Clytia hemisphaerica|type=gene|length=7817bp|location=Sequence derived from alignment at scaffold_142:488645..496461- (Clytia hemisphaerica)
CAAAGTATCTCTACACCAAAAAATAACGTTACTAGTATCAAGGCTAAAAA GTTCATTTTTTCCAATCTTCATTTTCAAAGACTCTTAAAAGTTATAGTAC TCTAAATTATCTTTGTAACGGTATGTATGATTTGTTTGAATTGGAGCATT GGTTGAAAAATAGCAGGCAAATCAGGACACTTGAAGCGAATTGACTTAAG TTAAGTTGGTCATTCCTTATACAGTAATGAAATCTTATGTGTTTTGATTG ACCACTTGGTGCTTTAATCGATTTCACATCTTTTTAGAAAAAAAACTCAA AAATGGCGGACTACACAGATGATATGCACATAAAAATGTGTAAAAAAATT GCACAATTGACAAAAGTAATTTACAATTTAAATTCAAGAGCTGAAGAAAG TGACACTATAATTGCAAACATGAAAAAAGAATACAAAGCTAATATTACAA GAATAATGGAGGAAAGCAAGAACCAAATCTTTTCATGCAAAGCCAAGTAC CAAGAGTATGAAAATTTTGAAAAACAATTAAAAAAATCAACTGATGTTTT GAAAGAGACTGAAGAACAAAATTTAAGATTACAGAAAATTTTGGAAGAAA CTGTTGAGAGGTCAAAATTGAATGAGAATAGTTTGAGAACTGATTATGAG AATAAATTATTGGATTTACAGAATAAGTTGTTGGAGAGGAAACGAGAATA TGGTGAACTTTTGGATAGGTTTTCATCTTTTCAGAAAGATCTAGATGCTT CTAAACGTGGGAAAATAAGTGAAGTCAATAATCAACATGAGCAGATAGCT GTTATGAAAGAGAAATTCGAAAAGGAAGTTTTAAGAAATAAAGAGAAGCA AAATGAATTGAGGGACACCATCGAATCTATTCGAGCAGAATATGAAATTG ATCGTAAAAATTGGTTTGGTGAAAAGGATCAAATCCTAATCGAAAATGAA GACAAAATTTTGAAATTGAAGCAGTTGCATGCAAGGGAATTAGCCTCTCT AGGAGGCCAAATCAAGACAAATGAGTTTGAAAAACTTGAAAATGAAAAAC AGAAATTAATCAAAGATTTCGAGTTGAGAAAAACAGAATTTATTAATAGG ATTCGATTCTTAGAGAAATCTCTCAGTCAAAATGAAGAAGAAAACGAAGA GATGAAAGCAAGTAACACAAATTTACAAACACAAGTTATTCATTTTGAAA AGACACTTGCTTCTGTCAATTCGGAACTCAAAGAGAAAATTGTCCATTTG GAACGTATAGAATCAGAAAGGAGACGAAACACTGACGATTTTTCAAAACA GATTTCCAATCTTGATCAAATGAAGACACAACAAGAAGGTGCGTGTTGAT TTCTATGTTTAAAATTTCACTACACTTTTGAATTGAAACATAATTTAGTC TCAATGAAAATATAAAATTTTTCCTTTGAAATTGTATTAAACTTTGAGAC ACTTTTTTGTTCAATTTATAACTCAAGCTATAATATGAAACTAAACACCA GTTAAACACCATCTGTCAAACTAAATGTAGTCATCATCAAACATCAAGTG TATAATGAGTTCTTATTTCAGCACTTTTTGAATGTTTTTGTGGAATTTTG GCAGAAACGTGAAGTGAAAACGTGAAATTTCTACAGTATGTGAAGCCTGC ATTTTCTTAAATCTTTGGCTCAGCTCTATGTCCTTATAGTACCTTTTTCT TGTAAAAGTACTTAAAATAATTGATAATTTTTTAACAACATTAGTAACTT GTGGTGAAAAATTGATCTATACCAAGGTCCAAGGTAGAGCTAAATTCAAA ATTTATTATTCTTTAAAAAATTAAAAACATGATAATTTTTTCATTTTTTT TTAGCTTCTCTTGTCAAATTGAAAAGCAAATTGGATTCTCAAGCAAACGA GTTGAACGAAACAAAAATCCATAAAAAGGAACTTGAAAAACAATGCTCAT TGTTAGAAAAGGAAGTGGTGACATGGAAAGACAAATTTGACAGTGAACAC AATCGATATCAAATAAATCAGAATGAAATTCAGGTTTGATAATCTTTACC AATTTTCATGCAAAGGTTTTCCCATTCACTTTTTTTTGATAAAGAAGTAC ATTATTGTTATTAGTGACCATATTATAAAAGTAGAGCACTCGGCTAGAGT GTTTGTTGGTGTCAAACCCAGGCTGCCGGGCCATACCAAAGACTAAAACA TAGTAAATGATGCCTTACTGCTTAACACTCAGCAGTTAAAAAGAAGGATT TTAAGGCTAAATTGAATCTAGTTTGAAAGAGGGGCCTTCAGGTCGCTCAG ACTAAAGTTGTTTGAATACTTCCCTTAGCCTCGTCGTTCACTTACAAACA AGCTCTAAAAATAATGTAGAATCCAGATCTGATTTGCTTGGGCCATTTTT AAGAAATAGTCTGTACCCCCTCCCCCGTATGTTTGGAAGGTGTTTCGTCC AGGGTGGTCTGGATAACAAAATATCCAGGGGGTCACCTGTCCCAAAATAG ACCTCATCAATTCTGGGATTGCNTTTAGTCTCAATGAAAATATAAAATTT TTCCTTTGAAATTGTATGAAACTTTGAGACACTTTTTTGTTCAATTTATA TCTCAAGCTATAATATGAAACTAAACACCAGTTAAACACCAACTGTCAAA CTAAATGTAGTCATCATCAAGTGTATAATGAGTTCTTATTTCAGCACTTT TTGAATGTTTTTGTGGAATTTTGGCAGAAACTTGAAGTGAAAACGTGAAA TTTCTACAGTATGTGAAGCCTGTATTTTCTTAAATCTTTGGCTCAGCTCT ATGTCCTTATAGTACCTTTTTCTTATAAAAGTACTTAAAATAATTGATAG TTTTTTAACAACATTAGTAACTTGTGGTGAAAAATTGATCTATATACCAA GGTCCAAGGTAGAGCTAAATTCTAAATTTATTATTCTTTAAAAAATTAAA AACATGATAATTTTTTCATTTTTTTTAGCTTCTCTTGTCAAATTGAAAAG CAAATTGGATTCCCAAGCAAACAAGTTGAACGAAACAAAATTCCACAAAA TGGAACTTGAAAAACAATGCTCATTGTTAGAAAAGGAAGTGGTGACATGG AAAGACAAATTTGACAATGAACACAATCGATATCAAATGAATCAGAATGA TATTGAGGTTTGATAATCTTTACCAATTTTCATGCAAAGGTTTTCCCATT CACCTTTTCTTGATAAAGAAGTAACATATTGTTATTAGTGACCATATTAT AAAAGTAGAACACACAGCTAGAGTGTTTGTTGGTGTCAAACCCAGGCTGC CGGGCCATATCAAAGACTAAAACATAGTAAATGATGCCTTACTGCTTAAC ACTCAGCAGTTAAAAAGAATGATTAAGGCTAAATTGAATCTAGTTTGAAA GAGGGGCCTTCAGGTCGCTCAGACTAAAGTTGTTTGAATACTTCCCTTAG CCTCGTCGTTCACTTACAAACAAGCTCTAAAAATAATGTAGAATCTAGAT CTGATTTGCTTGGGCCATTTTTAAGAAATAGTCTGTACCCCCTCCCCCGT ATGTTGGGAAGGTGTTTCGTCCAGGGTGGTCTGGATAACAAAATATCCAG GGGGTCACCTGTCCCAAAATAGACCTCATCAATTCTGGGATTGCCGTTCT GAAAATTCCTTCTATCCTTTTTCTTTTAGAACCAATTCAATACCGTTAAC AATCTTCAACTGGAAATCCAAAAACTTCAATCAAAAATTAAAATTCTTGA AGATAAGAGTCAAACAGACTTGAAAACTTTACAACAAAAGCAAACCAGTG AGCAAGCTAAAGAACAGAAGAAACATACACAAGACATCTCACGTTTTAAA GAGGAATCCGAAAGAATCCTGAAAGAAACACAAAGCTTGCTTTTGGAACA GTTCGAAAAAGATAAACAAGCAATCAAACTAGAGTTTGATACTAAAATCA ATGATCTTAACTCACAGCTAAAGGTTTTGGAAGAAAATCTTTCATCCAAG GCAAAGGAGGTTGACCACCAAAACAAGACATTATCCACTGTCAACAGTAA GCTACACGATTCGAATCGTCAATTAGTCGAGCTTCAAAAACAGTATAAAG ACCAGAAGAGTATGCTGGGCAGTGCTATGGAGAAAAACAATGATTATAAG AAGCTTCTAGCTGATACCCAGGTAATTTTTTAGCATTTGGTCTTTTGGGT TTTCGTATATTCTAAGGATCTTAGGAAGAACATCTTTGGGAAATGTCTCG ATTTAAACAGGATATAATTTGACCAGTAAAATTGACCATTAAAAACCATA CGAGAGTCTATTTCATGCTTTGCCAAGGCACAAAATGGATTTCTAGATGT TTTGTTGTGACTCTGGTGACTCAACGACAGATTCGAGTGTAGTTCGAAAA TACATATATACTAGGTTTTCTTTTATCCATCTCCATTTATAGAAATCAAC AATCTACAAACACTACAAACAAATCGAGTTGTATTTTTTAAAAGTTAAAC TTCCTTATAGTCTGGTGCTTCAAACGAGAAAGAACAATTTCTTATGGAAC AAAAACACAAAGAACAAGAATTTCAACAACGAATAGAAAGAATCAAAGAA CTAATGCGAAAAGAATCTTCCGAAAATATCAGGTTTGTTCAGAATCACTA ATGAATTCCCTTGCAAAATGGTGTTAACTGTTCTTTTCTTGCTAATACTA ACAAATTTTGCCCTTAACAACTTTTATTCAAGTTTCACTCATGGTAATTT TTTCCAAATTATAATATATAAGAACAAGAGCCAAACTATTAAGAATAAGT TAAGAACATGCTTCGCGTACTCCAAAGCAACCAATTTCTTTGTGAAAGTG GTGAAAATAAGAACATGTTAACAATTCTTTTAGGCTATAAACTTAAGTTA AGAACATCATCCGAAGGCTTCATTCAAAACGTGTATGAATTTTTTTATGA CATTTACTTTTAGGAATTTGACTGAAGCTCACCAGAAAGAGTTAAGCGAG AAAATCACCCAGCACAACCTTATCATAGAAAAGATGAGACTAGAGTCAGA ACAAACGAGACAACATAAAGAAAACGAGATACTGCTTTTACAAAATGACG TAATGTTAAATCAATACACCTTTTCGACCGTAGTCGCGTGGTCAGGCGCG TGCCACTTAATTATTTGATTATCCTTAAACTCGATTCAATCCTTTTTTGA CACATTTTTCTATTGTCTATAAGTGCGAAAAATGGACTGGGACGGTTTTA GTGGGATAAAGCGGACAAAAAAATGCCTGCGCGGTAATTCGCGGCTACAG TCGAAAAGGTGACGTTGACTTTTTTCTTGATCTAGTGTCAATATGCTGTA GACTCGGGAATTTATCAGATATTACCATCTTTCAGTGGCCCTATAAGAAT TAAAGATTTTTGAAATAATGTCAGTGACACAGATTAGTCGACCAATTGTC ATCTCTTTTTCAATTCTTCAGAATTCTTATATAATTTCGTAATATGAAGA ATGTGACAAAAATACATTTTCCATCGAATTATTTTGTTCTTTCAACAGCT CAAAATGTTATCCGAAAAACAAGATAGAAATCGTGAAAGCTTATCAAGCC AGCACCTGACACACCAACAAGAAATTACAGATCTTAAGAAGGCCTTTGAA CAACAAAAAGAGGAGATGTTAAATGATTTTGAGCGACAATTGAGTACACT CAAGGACACTTCTGTCGAAGAAATGACCAGAAAAGAGGACGGATGGCACG AGATGATGAAGGTTCGACTTTGAAACTTTAAAACAGAATGAATAAACACA AAGTCAAGATGAAGTTAGGACGAAGATTTTTGTTTGAAATTTCATATTCC GCTCAACTGAGCAGGTGTTGAAAAAGACTTGAAAATTTGGTTCCCGTATT TACCACTCTTTTGGGATGGGATAGTCATTCATCATAAAGTCACATTTTCT TTGGCAATAATTCTTAAAAGAAAACCTTTAGCCCAGTAATGAAAAAAGTG TTACTATGGCCTAAGAACGTTCCATAGCCATATGTTTACATATTGCTTTT AATTCTATTACACAGCAAGAAATGTCGACCATTTCAGCAGATCATCAGCG TGAACTTGAAGAACTACACAAATCAAATCAATTATTGCTGACGTCGCTAA AAAGTCAATTGGTTGCTGAACAGAAAGCAGAGAGTGAAGAGCTAAAAAGG AATTTTGCAATTGAAAAAGGTAAAAGTTACTTTAGACGTACAAAATATTT CGTAAACGCAAACCTTACCTTAGCTATTTTCGCGATTTTTAGCCTTTTTC ATTAAAGTGCATGTTTTTGAAATAACGATTCGCGTTAAAAAGATTACTTT AAAAAGCTGAAAATCATTGCACTCCTAGTTGAAACTTCAGTCAATTTGAT CGTATGCTTTTAATCTTTTTAAATTCAAAGGAAACCTTTTTAATTGAATT GGAATTTTTAACTCTTCACAATGTTTGATGAAAGTTTTGGTGAAAGAACT CGCGAAAGTCTATGTTGTAATTTCGTGATTTCCCTACAAGTTAATGGTCG CGAAAGTTTGTACGCCTAAAATATTTTCTACACCCGAACTGTCGTCTTTT CTCTAGCAAGTCACAGTTCTAAAGATTATTTAAGATTAATTTATTTTTTG AAAACTCTAAATAATATGAAAATGTCACCCTCAAAGTTAAAGACACGGTA GAATAAATTCTGGTTAAAGGATGAACCAACTGCTACTAAGTTGAAATTTA AAATCATTTCCTTATTGGAACTAATTTTCGGGGAAACTAATTTTCGCGGT CGAAAAAATATCCGAAAAATTGCATTTCACGGGTTTTTATTTTCGTGGTT TTTTTCATTCTGGAATTTTCACGAGTTTTAATTTTCGCGGTATGATCTTT CTTTACCTGCATCGCTATGCTCCTTTTGTGAAAAAAGGGTGCGTTTTAAT AAAATCTTTATTTTGTACTGAGGATCTGTTCACACACGGATTATATTCCA TTCTTGTTGAATGTTACTATTTCAGAAAAACTGCAAAATGTGTTACAAAT TCAGCACGAAGAGCGATTGAAGCAAATTATGAAAGACTTCGAGAAAGAGA TTACAACTCAGAAAGATGAACTCTCAACCAGTAAAGACCTTCGTCAGAAA GAGGTATGTTTTCTTTCCATTCTTCAGTTCATTTTTTCCATTTTTCTGTC AACAAAAATTTTACGTTTTGGCCAAAGTTAAGTCAAAATTTTAAAGGCTA GTTTTTTTAGACTATAGGAAATTTTGAAATAAAATGTGCTTTGCTCAAAA GTGAAGGGTGCTATCTCTCCAATGTGTCGGGACTATGCTTGAAGCCAAGG CTAAAAACAACACTGAACACTTAGATATTCCCTTTGAGAGAAAATGAATG CACGAATCAAAACAGAATGATTTAAAGAGAGTGGTTTAAAGTCATCAATT TAATTTTAATTATGATTTTGTTTTCTTTTTACCAAAAGGATTCGCCCACT CGAGCGGTATTCTATTCTCTAACGAAATATCGATTTGGGATTTTTGTGGC GGAAACTTTCTTCCACCCACCGTTATTTTTATTTTGTTGAAAACCTATTT ATTTTTAGCTTTTACATTGTTTTAAAATCGTTCATCGAACTGTAAGGGTT ACTTTCAGATAGGAAAAGAGGTTTTGTTTCGATTTTATTCACACCTTTGC TTTATTGAAGATTTTTTCCCGTCTTCATTGGAAAGTGTTATTAACTCATT GATTGTTGTGTGTTAAAAAAATAAAGAAAATTAATCTAATCTATTAGAGA CGTGATTATTCCGTCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048378TCONS_00048378Clytia hemisphaericatranscript
TCONS_00048377TCONS_00048377Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048378-proteinTCONS_00048378-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_142supercontigscaffold_142:488645..496461 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.8 6.26 2.12 1.22 20.63 14.71 9.03 8.68 4.06 4.73 3.92 3.08 1.5 1.11 1.24 1.4 1.56 2.2 1.34 1.46 2.21 2.08 6.21 6.4 10.87 10.91 1.98 1.76 4.55 4.88