XLOC_030860 (gene) - C. hemisphaerica

Overview
NameXLOC_030860
Unique NameXLOC_030860
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_143:76462..82778-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030860 ID=XLOC_030860|Name=XLOC_030860|organism=Clytia hemisphaerica|type=gene|length=6317bp|location=Sequence derived from alignment at scaffold_143:76462..82778- (Clytia hemisphaerica)
TATTACTTCTTACCCTTTCAGGAAATGATATAAAATCATCGAAAGTATAA CAAAAACATGACTTCAAATTGGAGGCTAAAGAATGATTCTGTATATATGA CTATGCTGGGCATCATTCATTTATCTAAATTTGATTGATTTCTTGTGATG ATGGGAAGTAGGCAGTACATTTGTAGGTGTTATTTCCAGAGGAATATTTT TCTACATGACTACAAATTACATGTCACTTACAGAGATGAGCAACAATTCA AGGATGATTACAAGAGTGTGAGCTAGCTTGTCCATTAGTTTTTATATTGA GTTGTTTGATTTGAAACTCTGCCATTTTAATGTTAACAATGCTATACAAA TAATACTGCTAAATCCAATATGTTTTCTAAAATTAATAGCAACAACACAC CCAGGTATCAGTAGATCTCGTAAGAATTATATTCAGAAGTTTTTCCAATG AGACTACATATACGTCTCACTCATATTTTTCAAACAGATTTTAATATATT GTAATATTATTTGTCACACTATATATTTCGTAATTTCTTTGATCGTCTTT TCATCGGTAGACTCTCGATCAAAGAGGATGCACAGACCTATCTGCAGTGA TTGAACAAGTTCATAAAGAGATTAAAAGACGTGAAGAAAATGGACGAATA TCATCTGAACGCAAACAAGAGATAGAACGATGCTACAAACCTTTACATTC GAGCGTCTACTCTCTGAAGGTTAGCTCTAAAACTACATAAAGTACGTACA ACCTTTTCAATGTCATTTGTGAAGAAGCAAGTTTATGTATGTGTGTTGTT CTGCGATGGAAACAATTAGCTTTCTCTAGATCTAGATCGACTGAGGACGA CGGTAAACGAGCACTTTTTCGGTCCTCGATTTTGCAGGTCAGAGCTGCAG GTTTTTCCAAATCGCTGTCCTTAAAAGTGCAAGTACATAAACTCGTTGGT TTCTTGTGATCTCAGAGAAGACACCATAGTCTCCAGTCTCCCTGTGTTTA TTCATTTTAATTTCAGGAATTCTACTTATCACCAACATTCTTATCCATTG TTGAATATTGTAAACAAGACAATGCAGTGAAGACAGAAGTACTCAAGCAA CTGAAATCTTGGAAAGGTTTACTTCTCTGCTAAGAATTTTCACATCACTT CTTGTCTCCTCTTCTTAGGGTTCTGACCATAGTCAGAAAATATGATAAGG GATTTGAAGATTCATTTCGGGATCCTTGACACTTTTAGCAAGAAACTGTC TTTATAAGTTGTTTGGTAATTTATTCTGTCAAGAATAATTAAGTTGTCTG CAAAGAATTGATCTATTGAAATTTTTCGGAAATATTTTCTAGTCGACTGT TTTTCTACCAAAAGTTGTGATGAAAATTTTCGTCAAAAACCACATTTTTC AAGATTTTGAGACAAAGTAACTTTTACCAAAATTTAGGAAAATCCATTTT TAGTTTGGTTTTAAACTTAAAAATACCTGAAAATACACCATCTAACGCAA ATTTGTTCAAAATGTTTTTTCTTCACCGAAAATAAGGTATTCAAAGTTTA AATTCTCTTCTTTGCAAAAGTCTTCATTTTCTTCTTCATCAAACTTTTTC ATTGCAATTTTTAAATTTTCAGATTCAGGAATAGTTGGCCTGACAGAAAA CAGAAAATGTATAACATGCCATGGTTTGGTTGGCAGAAATTTGTGTTTTG TACATAGCAATTATGAAAAATTCACTATGGTCAGCCCTTAAATTATGATA CCAAATTTCCAGCACACAGCTCTCTTGTGTGATGTGTCCTGAAAAGATAT GCTTTAGCGATTTAACTTTGAATGTGCTGCTTTTCTTCGTAATAGGTAGT AGTTTCGTATTAGTTTGAAGTAAAGGATCAAAATATTTTTCACCGCTTAG CCGATCAAGTTTATTCATTGGAAGTGTTCACTAAAGAATTTTGTCAACTC TTTCTCGAAGAATTGAAACATTTTGAGGAAAGTGACATGCCTAAAGGACG TCCCAACACCATGAATGTGACAGGCGTAAGTATTTTCATAGATATAATTC AAAACCGTACCTATTTATTAAAGTGTTTGTTAGAGTTCTATAATAAATTA ACCCTGACACCAGATACTGTTAATCTATGTCCAAAAATCTTTCGACCCTC ATTCATCAACTTGCAACAGATCAAAGCCCCTAGATGTTCAGTCAAAATGC CTTCTTTATTTCTGCTAAAAAAGGGAAAATGTTATCTTCATAAAGTAATG CTTTAAAAAAATTCATGAAGCAATTGGAATGGCAAGTTTAATTTCTCAAA AACTCCTCTATATGTTTGTGCTATATTGTCAACCTTACACAGTTACTCCT TGAAGAGTTGGGATTTTATTCAAACTTGGTGAATCCATTGCGTGAGAAAT ATTTGAATCCAATAGCTCGTATATTGTATCCAGATTGGGTTGGAGAAGGT AGGCTAGATTCTCAAAGAGCTTTCATTGTTTCTTATAACAATTGTGATGG TGATTCTGAGGACACTGCCACAGATCTGGCGCTTCATTTCGATAATGCAG AGGTCACATTGAACGTATCGTTGTCCAGTGGATTTGAAGGAGGAGAGTTG TTCTTCGGCAAATTGTGGAAGGTATTGCTTTTCATTTTTTCAACACCGTT TGGTGTTTCGGGATTAATTGAAAATTCTTTTTGTTGAGACAAGTTTTTGG TGTATTAAGGAAGATCTAAATTTTGCCATCTCGTTTACACACATAATGTA AAAATATGAACTGGTGGAACCGTAATTACCACTTATCAAATATGACAAAA CTGCCCTATTCATGATATGCACCATTGCAATGTCTTCCGTTCCACCCAAT AGCTGATTGGTTGAAAGTGACGTATTGATTGATTTTACGTCACTCCCAAC CAATGAGCTATTGGTTCTGTGACGTAATGTCAGAAGACATTACAATGATG CATATTATGAATTAGCTGATTGGTTGAAAGGGACGTATTGACTGATTTTA CGTCACTTCCAACCAATGAGCTATTGGTTCCGTGACGTAATGTCAGAAGA CATTGCAGTGGTGCATATCATGAATTTAGGATATGCTTCACTGCAATATC TTCTGACATTACGTCATTTTTACAATTCATGATATACACCATTGCATTGC AATGTTTTCCACAAACCCAACAGGTTGGTTGAAAGTGACGTATTAACTAA TTTTACGTCACTTACAACCAATCAGCTATTTGGTCCGTGATGTAATGTCA GAAGACATTACAATGATGCATATTATGAATTAGCTGATTGGTTGAAAGTG ACGTATTGGGTGGAAAAAAAACAGAAGAGTTTCATAATCCATGATATGCA CCATTGCAATGTCTTCCACGGAGCCAACAGCTGATTGGTTGAAAGTGACG TATTGACTGATTTTACGTCACTTAGAACCAATCAACTATTGGGTCCGTGA TGTAATGTTAGAAGACATTACAATGGTGCATACCATGAATTGCGTGAAGT CATTGCAATGATGCATATTATGAATTCATTTTATCAGGAATCGACAAGTA CCGATTACAGGCGAGTGGACCATTCTCTTTCACACGGTGTGTTCCACAGA GGTCGGCAAATGCATGGTGCAATGCCCTTGGAGACTGGAGAGAGATACAA TTTAATCATTTGGATGCGGTCGTCAAGTGTCCGAAATAAGTACTGTCCGA TGTGTGAGCGGACACCTGACCTTGTTCCCACTCTAGGTGAAGGAGATGGC TTTGTAGCTCCGGAGGTTCATGTTTGTCAATTAAGTTGATAGCTATGGTC AGATTTTTTTCCTATATACTTAGTTCTGGACTGAGTTTCCTCCAGGTCAA AAAATGGATTAAAAGAAGTTCTTGAATCGGGTAGATTATTTTGTGTTTAC ACGACTAAAAGAATCACTAATAGTGTTCTGCCAAAATCGTTTCTAAAATT TAAAAATGTTATGTTAGCATGGCGTTCTTGATCTGCATTTAGAACGCCAT GAATGTTAGCAAATTTAAATATTGCTTTTGCTATTACTACAGTGTGCAAG AAAAAACAAAATTGAATTATAGTACATTGCTATTACTATATTGCCACTCG GCACTGTCACCACCGTTTACTAACTTTATTGATGTTAGCCAATTTAGTGA TACAGTAATTTTTATTTTTTATGTGCTTTTTGGGATATTTTTATTTCATA TGGATGGAGTATTTTTAATGGTGATATTTGCTTCAAATTTTATATAAGTT AAAAATGAATTATGTAGATAACAAATGCAGCTAGTGGCACTTAAGTTGTA ATAGTAGAAATAAAAAATTGTTTTGCTTGTTGTGCACTTTGTGATCTAAC TTGATACTTCATTTTTCCAGCTACAGCTAAAATGACTCCTGTTCCATTTC TGTTTATCAACTGGTCTAGTTTTAATAATTGCTTCCTCAAGTCTTCAATA CTTGTGCGGATAGAAACTAGTAAGCACTTAATCTACCGTATGATCTAGCC ATAACAAGCTCGGTAGGACTTAATACGGCCGTAGTTACTTTCTTCGATTG TTCAGCCTAGAGCTACATTCCGTCTCAAATGAATTCTCATTTCTATTCTT CTTCATTTTCAGTGAGGTAAAACTAGAGAAAATAAAAAAAGTTAAAAAAT GACAGCAGCTTCACAAATTCAACAACTGATTTTGGAGAACCTTGATCCAA TTCATTTCGTAAGTAAACATAATACAACAATTTTCTCGTCTTTATTATTA CCATCTCTCTGGTATTTTGAAAACTTCAATATTTTCAGTGTTGTAAGCAA TGGTACACTAGCTATTGAAAATAATGATACATTCGCTGTTTTCTTGAAAA TTAATCACTACCAGGGTAGAAACTTCGAAATGAACTCTCCGAAATGTTCT GAAAAGCAGATTCTCAAAAAAAAATTTCCTTGAAAGTCTCTTCCTTCCAA AGTAGTTGGCAAAAAGTATTAAATGTGTCTGACCTCTCTGTCTGGGATCT TTTTTTCAGGAGATCGAAGACAAATCTGGAGGATGTGGACAAATGTTTGC ATTGATCATCGTCTCTAAAGCTTTTGAGGGTACTCCTTTATTAAAACGGC AACGAAAAGTAAATGAGATTTTGAAAGACCTTTTACCGAATATTCACGCA TTGGAGATGAAAACATGGACGGAAGAACAATGGGAGAAACAAAAAAATAA AACCAGTTGAATTATTTGGGCTTGCATAAAGAGAGGGACTGTAGTCACGA TTAAACCTTTAATAATACCAATTAACAGAAGATTTGACGCCATTTTCTTT CTTGGTTGTCGAGCTCTGTTCCTCACACTGCTTCGTATGAACAGTAACAA TAAAGACAGTCATCGGGACTATCGAAAATGACAAACTATGATCATCTTGG TTTCTAAACCTGTATTAGAACTTATATTTATTACAAAAATTAGGAAAATG GGAAAATTGTGATATATTTTCACCCATTATTAAATGTAGCTATAGATATA TGATTTTACAGCACATCCTCTACAATTCGAACCTTTTTAACTTTCTTTTA AATGTCTCCCAAAAACTCGAGCAATTTGTTGTAATTTATAGTAATTAGTT ACAGGAATAAAGGCTTGGGGACACAAGAAGTTTTTTTCGCGTTGGTGCAA TGCAACATGCTCCATCTCACCAACCTAAAAAGTCTTCTCGACTCTCCACC CTATTTTTCTTTCGACCAATAAAGGTGAAATCTCACTTTTGCCCCTGGGA CAATGGAACAAAATTTTAATCAGCGTGTCTTTTGGGTATTTCCCGCACTT TTTTTCTTGTGTTGGTGGGATGGAGCATGTTGCATTACACCAACGCGAAA AAAATTCTCGTGCCCCCAATCCTTAATGTTAAACTTTAGAACGCCGGAAT TTACCGAGTTAACCAAAAAAAGACCTGCATACGATTTAAAGTTTGATAAA ACTTAATTTAAACCTTCCTCTATAGAATTAAAAAAAAAAACGAGAATAAA ATCAATAGAAAATCTTTTGATAAACCTGTATACTTTTTTTGGTGCACCAT TTTGGCTTTTCAAACTTGCTTGTGGTTTTCGCGCTATCGCTGTTGGAAAG AACATATTTGAAAAACAAGTGGTTTCCAACTATGAGAACCGATTATTTTA AACTTAAATAGATGTTCAAAGCTGGATGTCCAAGGATTATAGCATATTTC AAGCCGTGTACTTTTTATATTTTTTTTTACCAACATATACAAACACTTAA TTTTCTTGCCATTGTGGTTTTATTCATCAATAAAGAAATTAACCGGAATA CAGAACAAACATAAGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048530TCONS_00048530Clytia hemisphaericatranscript
TCONS_00048529TCONS_00048529Clytia hemisphaericatranscript
TCONS_00048528TCONS_00048528Clytia hemisphaericatranscript
TCONS_00048527TCONS_00048527Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048527-proteinTCONS_00048527-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_143supercontigscaffold_143:76462..82778 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
OGFOD22-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 Isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.08 18.93 18.14 18 10.1 7.85 11.06 11.45 11.01 9.75 10.29 11.56 7.87 7.74 11.7 12.68 12.31 13.91 4.82 4.75 10.73 9.18 20.72 17.39 12.74 14.77 7.36 6.1 12.17 13.86