XLOC_030847 (gene) - C. hemisphaerica

Overview
NameXLOC_030847
Unique NameXLOC_030847
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_143:195439..201523+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030847 ID=XLOC_030847|Name=XLOC_030847|organism=Clytia hemisphaerica|type=gene|length=6085bp|location=Sequence derived from alignment at scaffold_143:195439..201523+ (Clytia hemisphaerica)
AGAAAATATTGACTTTTCACTGACTTCGCGAAATAATGACGTAGTTAGTT AATGGGCTCATTTAAAACCGGTAAAACAAGTTTTGTGATTCGGGGTATGG TCATATAAATAAAATTCGATGCTAGATTTCATTCATATTCATATCATTGC TTGTTTAGATTACTTGAAGCAAagaaaagggaaatatttactACGCTATA CTATCAACTAACTACAACGATTTATTGAAACCTACGATCAGCCAAGGAAA CAATATTATTAGAGAGAAAGGAGTTGGAGAACATCACCAGCTCATTGGAc aaaaatgtctttaaaaaagaaTGTATTTGGAACATTCTACATCATTAGAA ATTTACTGCTCACGCCAGCATTGCGATTTCTCTTGTTTTTCTGTATCTGC ATTCAAACATTCATTGCTTTCTGGGGATTCTACAACATTTGGAATGTGAA CTCATGGAGCAACATTTACGACGTTACAGAGAATGTTTCGAACTACTTTA CCAAGATTATCGAGTGTTTTATATCATTCGCCTTACTCACGTCCGTCctt gtcaaaacaaaaacatttctaGGTGAACCGGCTAAACTCCGATTTTCCCT ATTCAATGATATCGGGTTTCGATCGGTATGGATGGGAATGGGGACATTTT ACATCATATGTTGCAGTATCACTGATGATGAAGCTATGAACATTCTCACT GAACAAGTTCAGTTCATGGCTACTGACACAGAATCGTTAAAAGAGCAAAT CCGATTCGTATATTGGGCAAGATATATCTTATGTGTTGCTGGAGTTCTTT GTATCGCCTTCagcatctttttgaaattcgGACAAAAGTTACCATGTTGC GGACACTTTTTTGATTTCGGAAATGTGGACGATGAAGATGCGCATGCGCG AGTTCAACCCAAGAAATGGACACGTGTTCCAACGAAgattaacaaacttt tattgTTTATCTTCTACTTCTTTATGATGTCTTTCCCAATCTTTGTCATC AGCGTCCAAATCATTTATCTATACTTCGAATTTAAAGGTAAGTCAAGTCA AAATATGGTTGTTTTTCAAGTTGGGAGCTTTATTTCGAcaacaaaatctt tttccaaTTAACTATATTTGAATTTGCTTACCCTTACTGGATATTTGATA ATTTACTTTTAAACTATGAGTTTGTGATCGTTAAAAAAGTAATAGTGAGT GAAATACTATGCATATTTCTGCTCATAATTTGCCTGGAAAGGAGACAGAT ATTCGTTATATCTATCCGAAAATGAtcattcaaatttattttgattttca aggaTACACTGTTGCTACAGCAACCACAGCAGGGGAAGTGACAGCTATCG TTGAAGAAGTGGTTGGCGCAAAACTGATGTACGGTTTACCAGATCTCGTC CTCGCTCTCGTCATCTTACAAAGATTTGCCAAACAATTCTGGTACAAACC TTATAAACCAGCTCAAAGTATCACCATTTTGTTGTATGTTTACCAGTTGT TCAGTGTGCACGCGCAAGCTAAGAAGTACAGCACATTCATTGTTCAAGAT GGTTGGAATGTTTCTGAAGATTTATTCCGCAAAGTTTGTTTAGGTATGTG TTTTAAATTCACTTTTAATGATATATTCTTCAGCGATCCAAGTATGTATA TATAAAGTATTTAGAAGGGTTTCTTTTACTGGCCCTCCCTCATGTAATCA CAGCATCTCTTGTGAAACTGAAGATCATCAGAATTTTAAGACGGAAAACC TGCCAACATTTGAGGTTTCAAATGGAAGAGTTTAGagagtttttatgaaa tttttgaacaTTTAGCTTTTAACACTGAGAGTAAATNAAGCTTTATTTCG AcaacaaaatctttttccaaTTAACTATATTTGAATTTGCTTACTGGATA TTTGATAATTTACTTTTAAACTATGAGTTTGTGATCGTTAAAAAAGTAAT AGTGAGTGAAATACTATGCATATTTCTGCTCATAATTTGCCTGGAAAGGA GACAGATATTCGTTATATCTATCCGAAAATGAtcattcaaatttattttg attttcaaggaTACACTGTTGCTACAGCAACCACAGCAGGGGAAGTGACA GCTATCGTTGAAGAAGTGGTTGGCGCAAAACTGATGTACGGTTTACCAGA TCTCGTCCTCGCTCTCGTCATCTTACAAAGATTTGCCAAACAATTCTGGT ACAAACCTTATAAACCAGCTCAAAGTATCACCATTTTGTTGTATGTTTAC CAGTTGTTCAGTGTGCACGCGCAAGCTAAGAAGTACAGCACATTCATTGT TCAAGATGGTTGGAATGTTTCTGAAGATTTATTCCGCAAAGTTTGTTTAG GTATGTGTTTTAAATTCACTTTTAATGATATATTCTTCAGCGATCCAAGT ATGTATATATAAAGTATTTAGAAGGGTTTCTTTTACTGGCCCTCCCTCAT GTAATCACAGCATCTCTTGTGAAACTGAAGATCATCAGAATTTTAAGACG GAAAACCTGCCAACATTTGAGGTTTCAAATGGAAGAGTTTAGagagtttt tatgaaatttttgaacaTTTAGCTTTTAACACTGAGAGTAAATGCTTTTG TGAAATCTTGAAATatccaattttttaaaactaattttttattCAGGTTT ATTGATCACCTACATCGCTTTCCCGATCTTGTTTTGGACCATCTTCATTG TGTTTGGCAAACATCATACCGATGATTTGACATCGGCAAGTGGGAGTGAT ACAAACGATTCCATGACACTCATCAAATCTGTTTTCATGAGAATATTCTC ACCCATTAGTGCTATTTTTCGTAAATATATCTTCAAACCTATCAAATGGT ACACAGCTATCTATACACTGGCTGTATTATTTGGACTTGCAGGCGGTGTT GCTACAGCGTTGAGTCAAACTTACGAAAAGTTTTACATCGATTTTCAAGG TATTTAAACTTTATATGAAAGTTAACATCTCGCAATGaccttttaaaaat cttttattcaTAAAGATACTTGATGACAATGGATAAAACCACTTGTCTTT ATGGGTAGGGATGCTTTTTCCTCGGAAATACAGTTATTTCCATAGTGTCT TTAATAGAGTTGCAAGTTGATTTTAATTGAATAACATTTCAGTGAACATT TTTCTTTGAAGGTTTAGACGTGCTAAACAAAATCAATGACGACTTTTTGT CCATCAATAACAAAATCGTTGATGTTTCGAATGGGTTTGTTGTGGTTGCA GCGAATCTAAATCCGTGTATGGATTACACGAAAACATCAAGCGGTGGTTC ATCAATCAGCTCTTTGATAGCAAAACAAGTTACCACAGCAGGAACTGATG GTCATGCTGGTTCAAACCCAGACTCCTCAAAAACAGTCATCCAACAGCTA CACGATGAAAGCTCAGATGCTAATTTTAAGAAAGATTGTTTCACAACTGA TAAAGGTAAACTAATATACTCAGGTGACACTAAGAATCCAGATTGCAAGA ATGTTGAGAATCTATCGAACAATGATTTCGGGATACAGGAGTTGAAGGAT AAAGAAGCATCAAACACAGAGACTCCACCGAGCTGCCCTGACGAAGCTAC ATGTTTGGCCAATTCACAATCAGTTATCAAAGATCAGTATGAATTAACGT TAAATAAAGAATGTGAGAATGCCGCCTGTGGCATCTTCATTGGTGGTCTT GTTGCTGCCTTTGCAGCCTCATTCATCCCGTTTGGTGGACCTGCAATTGG TAAAGGACTACAAGTTGCCCTGCGTATTACAAAAGGTGTGAAGCAGTTCG GAAAGGTATTCAAAAGAGTCGCCACACAAGTGAAATCGAAACTATCGAAG ATCAAGAGTTTATACAGCACATTCTCAAAAATTCTTGGTGATAGTAATCT GAAGGTTGTTAACAATTATCAATTCTTCTATTTCCTGGCTCCAGCGATGC TGTTAATGGTCGTCGCGTTTGGTTTAGGATTCTTCCGACGTCGCAAAGCA AGCAGTGCATCAAAAACAGTTTTCCTATCATTCTTTGCATTGGTAGCCGG TGTTTGCGGGACATTCACATATCTTTCTTTTATCTTCACCGACATCTTAA CTGAAATGTTCACACCATTCTCAGCCTTCGCTAACGTTTCCATCAAAACT GCTGTTGGTATGGATATGATTAAATGGGGATACGCTTTAAGTACTGTATC ATCTCTACTGTTCTTACTCGCTGCTGTCTATTCCAACATTGCTTACTACA TCTTTGGGAAATCATATGATGCGCCATCGAATGACCAACTGAATGAACAC GAACGTCAAGAAATGGTTGAGGAAGAAAAGAGACGTAGGAGAAGAGCGAA AGCGGCCGCCAAACATCCTCAAAAGAAACGCAAAGAGGAATACGTCAACA AATTCTCTGGCTGGTTAGTCGCTTTCATCTTAACCATCCCTGTCTATTAT CTCATCTTCCTTGCAAACAGTAACCAATCCACTCTTCTAACCATACAACT CACACCATCCGCAGGTCTCGAAGAAGTTCGTGTAACGTTCGGTCATACGA ACGCACTGGAACGTGAATTCGGTAGTGCCGACGATTTAAACGATGAAACT AACGAAAATTTATGTGACATCGTAGCGAGCGCTGTCAAGGGTATCATTGA TAGCATGAAGCTTCCCATACCCGGTGGCTCAATCAAGGGACTATTTGACG TCAATATCGGTATCCGACAAAACGTTGCTGACGTAATCCAAAAAGTTCGT GACGCCGTCACACTCAACGTCAACGGGTTCAACTTATTTGATGGTAATAA CTTCCCGACGATCTCGTTATCTTTTGCGTCATGGCAAATGATCCTCGTAT TTGGTGTTTCAATATTCATCGTTGTCGGGACGGCTGTTTGCTTTTTATTT ACGTTTATCCAACAAATTGGTTTCCTTCGGGAAAGTCGAATCTTAGGACA AATAATCATGCCGTTTTTCGAACAAGTCATTATACCAGCTTCGATAGGTT CTTTCTTTGTGCAACTTGCCATTGTTGGTTTGTTTTCATTCATGGATGGT TTCCAGACTCCTATGTTTTCACTGTCCATGCAAGTTGGCCCTATGGTGAC GTACGGATTGCTAGCATCCGTTGTTTGTATGGTGGCTTCCGTGTTTCGTA TCATGACGGAGTACGCTCCAATCGCCGACGACTCGACTGATGGTCTTATC GAAGAGGCGGCAGATGAGGAAGCTGGGATAAGGTCTACGACCGCAATGTA AAACATTCACTAGTTCCTCGCAACAAAGTATTTATCGTTATTTAGTCCTG TataatatttagattttttacaGTCAACTTTTAGTCAttgaataccttaa aggaagaaattttggcggaaagaaaatttggcggatttagttcctgccaa aatttattttttccgccatccgccaaattaaacattttgaaaatatgatc tcttttaaggtgtttttgctattttttcactgttttgacgccatcttaag gttaaattttaagcgatcgccaaattaaattcccgccaaatttaggtttt tcgtccatccgccaaattataTTCCCtccgaaaaaacttttttggacatc cgccaaattaaattcccgccaaaatttcttcctttaaggtatatcAATTA TTTTTAACTAACATATAATCGACATATATCTTATATCTCAAACATCTTAT TACTGTATATAGTTTATTTATTCCAAAACTATTTTGGTCAAAAGAAACTT TTAGACTTTAAGACATAACCATTGCTATTTTCACGGTCATCTATTTCTAT GTTTAAAAGCTTCCGTTACTTTCCATCGAAATTAGATAGTCCTTTACCAG GGCTCCCAGCCAACATTCATAAACTCCTCAACAAAGTAGGAAGTTTCACT AGTGTTTATTTATAGTTATTTAATCCTGTataatatttagattttttaca ATCAACGTTTAGCCATTGAATATTATTGGATTGTCAATGCGAAAAGATGC TTCTTTACTTTAAGAACAatcctagcctggatatccaagctcgaaatttt agaaaaagctttacctcaacatacaaagttctaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048498TCONS_00048498Clytia hemisphaericatranscript
TCONS_00048499TCONS_00048499Clytia hemisphaericatranscript
TCONS_00048500TCONS_00048500Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048500-proteinTCONS_00048500-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_143supercontigscaffold_143:195439..201523 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.28 1.07 0.27 0.39 32.43 22.47 12.08 20.68 13.57 123.85 15.24 76.5 157.67 110.62 29.01 23.4 32.34 112.99 78.17 147.9 14.78 15.38 3.46 2.51 9.37 2.69 69.04 19.14 23.29 14