XLOC_030849 (gene) - C. hemisphaerica

Overview
NameXLOC_030849
Unique NameXLOC_030849
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_143:234075..238717+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030849 ID=XLOC_030849|Name=XLOC_030849|organism=Clytia hemisphaerica|type=gene|length=4643bp|location=Sequence derived from alignment at scaffold_143:234075..238717+ (Clytia hemisphaerica)
TCAAGTTATAATCAATACATACAGCAATAAAAAGTCGAATATCGATGTTG GCGAAGTAATAGTGGGAAAGCAACCAGTACTGAAAGCAACAGCCACCACA ATGTCACACGAAGCCGGTTTTCTGGTGGATTTCCCATACACAAATGACCA AGGGAAATTCTTGTTGAGGAAAGACAAGCAACGAAAAAACTTGTGTGGAG AATTCTGTAGTACAACGTTATGCTGTCGAGGACAAAATAAAAGTGAGCTG GCTTACAGGGTAGGTTTTAACTTATTGAATCCACAAAGACTTTCACTGTG TAAAACGCAACATCANAGTGAGCTGGCTTACAGGGTAGGTTTTAACTTAT TGAATCCACAAAGACTTTCACTGTGTGAAACGCAACATCACAACAAAGCA CTTTCAAACCACAAAGCACAGCTTTTCCTGTGAACGACTCCATCATTGTA TAAACGCTTTGAACTATCAATCAAGTTGATTAGTAAAGATTTCTTCATAT TGAGAAATACATTCTCATTTACTGAGTTTGATagaaaaaattgttctgtt gAATCCAAGTGAAGCCTTTGATCTGAATAACTTCTATAACCAATATACAT CCAAGTAAATTAGATTACGTTCTTTTTCAGATGATGTTCTGGCTTGGTAT CATTCTAGCCGTTATCGCCATTACCGTTACTCTCATTAAAGAGTTGTTTG AAGGCGTGAAGGGCGAAGACACCATCTTACACCTTAGTATAGGTGAACTT GTCCTAGCCATTCTCTCAGTCACTACAACTCTTTCAAAACATCTCATCAA ACACAACGATGTTATAGTATCCCAAAAACGAATCCGATCAGCTGAAACTA AAAAAGACCAACAGAAAGCGCTGACACAACGTCGTAAAGTACAAATTATC TTGACAACCACTTTGTTGTTATTTGTGGGAGCCATAGTAACCGGCTTCAC CATTTTGATGGCGAAAGACCCTGAAGAACACGCATACTTAACGTACACCA AATTCATCACAGTTCTCACCTTATTCCTGTCAATCATTTTAGACGGAGTC ATCAATGATATTTTATCTGACTATCACAGTCTAGTGCAAATAGATCAATG CAAGCTAGTGATCCATCAACTTAATTTAGAATTACGCGATGCATTGAATG TAGTTGGGGATAAGGAACGAGCGAATCAGTTAACTTCTTACGTTGATAAT CATGAGATTTTCTGTTTGAGTGATCATATGATTTTTCTTGCACCCAACGA AGGAGGGCCTACAGTGACGAATGGAGATCACCCTATGGTGGAGAGTACAC ACCTTATACATGAAAACGAGGCTAATGATTGGGTTTAAGGGTGTTGTGCT TTTTGGTCAATGGAGAAgacgtttttgaaaaaattatttatttttttata accgTATAAACATTTCTTACTGGCCGTCGAGAGACAGCCTTGAAGATTGT CTTGATAATGTTcgtataatttttttgattaatttattTTGTACGTTAAA TATTTCATATATGCTTTTTCTACATTAGCTTCACTTGTTTCTTATATTAT ATCAGATTTACATTTATTTTATGAGCATTTTATTTAGTCAAATActgggt gacccacgaaaaaatTCGGATgtttctcgacgtcttgaggccgaacaaat gtcccaaagtgcttggagttttgtatcctaacttaaaatttgagctatta ctttttaaatttgacccacAAGTTcactacttatgagcttttaaactcaa aattcacttttcggaaagtgtaaaaaccaagtaaaaaaggggtatcaaat taggtatttttagacgttttcgATATAGAGTTGTTGAGGAAATTCCATGA AAgtgccaatttttataaaaactagtcttggtttaaacaaaaattacttt caaaggtgtttttaataatgattaatgtcataaaactcgttagataagtc aatttgtaagtgattttctaattggttgcataaatttaatacctcttttt tacttgttttttacattttccgaaaagtgaattttaactataaaagctca taagtagagaactagttggtcaaatttaaaagtgataactcaaattttaa gttaggatatctaccgGATTTCTAAATACCGAAACtgcaagcactttggg acatttgttcggcctcaagacgtcgagaaactctgaactttttcgtgggt cacccggtacttAAAACTAATCCtgagaaaaagtttaaattgcCATCCAA CAAGCACACATTTGAACGTGGACCTTAACCCTTTATGTGCCAATGttgta tatatcagacatgggctatgtaggagggcgaagccctcctgtaatgccca gtttgagttagaaatcgtcatttttggtctagcTGTAGGAatcggattgg gcttcatggccaagcacaaaaaaatcaaaagtgagtcctttttgcgagat tttaagctaaaaagtaaaaaaaaaaaaacatggaaaaatccactttttta agattttgaccgttttttgatcatttttggtcaacgagtgatccaagaac ctccaaatttggccctgattaacttgattctgtcctccagcgaattagtt tgaagttttaccactcaGCACCTTTCAATCATTCTATGACTGCTTTAATT TCCCTTACCTATAGCCCCTTAGCCACCGCCCTTCTTTATTCGGGCGGCAC CGAAGGCGCCTAAAAGAAAggggagactctaagctatccaacggactata aacgagcttctaactccttctagatccggagatataagcctttaaagttt gaactagcgattttttttctaaagctcagaaaaaaatgaccttggtactt aaagggttaatgatTATTGGTTGAGAGGTGATGACACAAATAACTATTTT ACCATAAAGCTTGGACTTgtctttttcctttttaattcaGATTATCAAAA CCCAATCTTTTTCCTAATATACTTTCAATATTGCACAATTTACTTTTCAA TCACCCATTCAATGAAATACATTGTCATAACATCAATTATTGTTTACGAA AAATCTCTCCTGGGTGAATTCGTCCTCCTCTCATGAATTATAAAACATGA TATTATTTTTAGAATGCTCCTTTCTCTCAAAGTGGGTATAAATAGTGTGA ATATTGTGTAGGAAAGTTCTTTCTTTGTATTTAACGCGATTTTTCAAGAA GGAACTCTACAGTATGACCAACATGGTAAGTTTTCCATGGAAGTAGACCT TAGTACTTGATTGGTCGAAATGATTATTTTTCGTTGTTGTTCTTCATTCT GATAGATTTTGCTTGATTTTACTTTAAATGAAAATGGAAGTGGTTTAAGC TGATTCTATTCAACTGACActaaatttcttttaatttggtAAACTTTCTA TTTTCAAGGCGGCCACAACAGAACTGATGCTAGCAATTAAAACGCTCAAC TTGCAGAAAGTGGCTGAGCTTTTagctaaaatgaaaaagaatggcAAATC CAACGGTACCGGAGATTCAAACAACAACATGCAGATTTCACTTATCAATG CCGCTATGGATAGCGGATCAGTGGACATGCTGCAAATGGTTTTAAACAAA GCCAAGGAAAGCGAAAAATCGAAAGAAGCTAGTTCGCAGCAAAAGCCAGA AGAATCGAATTCGCAAGAAGAATCCACCAAAAAGGAGGGACAAATCCAAT CATCAGATAAGGCGAAAGCGCAAAACCCAAAGTTTCTAGAAAACGCTTTT AAAGcttggaaatcaaaaatcaaaaaaccagAGACTGACAAAACGACTGA AACGGGTGCTTCCGCAAAACCAAAGTACCGTAGACCAAGCTGTCCAAGCG GAATagatgaaaaatatttcttggaacaAAACAGAAGACATTGTGTATCG CAAGCCGAAGAGCGCGCTGAGGATTTAGAGGAGTATGACCGGAATAGAGA GAAAGCTTACCAAGAAGAAGTCGCAAAAGCAGAAGAGATGCTTAAGAGCT TGAAAGCGAGATCTAGGAGGAAACACAGTGTAGGTAAAATGTTGTGAAAG ATTTCGATTCTCAAGAAGATGAACTTCTTAGAAGAATCACGGGTTTTGAT ATTCATTAGAAGTCGACATAAAAGTATACCACATTAGAAAAACAATACAG CGAGACTTCGTGCAGAGGGATAATGTTAATTGGTATTAAGAATGAAACGA TATCATGAAAGCATTTCACTACCGTGTTCTTAAATTCAATAGAAGTCGAC ACCAAAAAGTACCATACTTTTACGTGGAAAAGATGAGTAAGGCCTCTAct gtcaaaaagaatttttgattgAGACGGAAGCAAAGATTGAGACGCAAGAA ATATTAACCGGAAAAAAACATCGATAATTTGAATTCGATTCTTTGCAACA TTCGCTATTGGTGGAAAGAGTCACATTTTAAATTCAGATTAAATTATTGA TCAAGATATTTTTGGTATAGAATATTTTTGTACACAATTGTGAATACATA TTATGACAGATTGATGAATTTTGTTCGACACATCAAGTTATTTTGACGAT TGATCTTTTTGATacatttcaagaaaaactaaatttaaccttgctgttgt tttgatgtttctccCCTTGCCAAAATCTCCAAAAATATGCACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048502TCONS_00048502Clytia hemisphaericatranscript
TCONS_00048503TCONS_00048503Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048503-proteinTCONS_00048503-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_143supercontigscaffold_143:234075..238717 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16 0.26 0.27 0.49 10.58 8.16 14.49 14.82 9.52 7.24 7.29 8.17 21.09 16.98 5.82 4.66 2.85 3.92 26.37 24.52 5.79 5.08 2.04 3.69 3.25 5.95 2.71 2.64 0.3 0.39