XLOC_030877 (gene) - C. hemisphaerica

Overview
NameXLOC_030877
Unique NameXLOC_030877
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_143:481479..488963-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030877 ID=XLOC_030877|Name=XLOC_030877|organism=Clytia hemisphaerica|type=gene|length=7485bp|location=Sequence derived from alignment at scaffold_143:481479..488963- (Clytia hemisphaerica)
AAATTAACGCAATTTTTACCAGCAGTTCGTGTCATGCTGTTATGGATGGT GGATCATTCGACTCTCATCTCCAAATCATCTGTGAAGTATGTATGCAAGA CTTGTATACGATCGTCACTCTCCGTGGCCTTTCAAATACCAGATTGTATT TTGTTTCATAGCTTGAGATAAAGAGACTCGAACAAAACTCAACGAGATTT GTCTGAATGGATTAAATGACAACTACCAAGCACTATAAATCTCGCTGAGT GCTATGTGTAATTTTTTCTGTACGTATACCAACTTCTTTTTGTTGATTAG TTCAATGATGGATATTTGGTCAGAGATTTGCCCACTTTTCAATCATATTA CCAATATGGAGTTGGAAGAAGCGAACGGAATTTCATCCTCAGAAGGTACA AGGCTAGAGTACTCGTGCATCTTTTACATGCTTTTTTTCTATTCAATTTA AACTGTTTTCTCTTGCCTTTGTAAAACTTAATAATCTCAATTCGCAAAAG AGTGTTCAATCATAAAAAGTATCCCTATCGTCAAAAATTTTGATGACTAG AAGAAATAATTATTAACAATTATGTAATGTAAGATGATAAAATGTTATGT CGAGAGAAATGGTTTCTTTACCTAGTTTTGGACTAAAGGTCATGATTCGA TTTTGAATATTTTTTAGATTCGGACAATGTGTACCTGATAGAAGACATTT TTCTAGCCGGCTTCAAACCATACTCTTCCAAACTTGTGAACGGTCCTGCT AATGAAAGACTAAAGGTAGGTAGGAAGAGAAGAGTAAAACTTTAATTTAG GTTTGTTCAAATATAAAAAATGCGTCTTTGATCAAAATTTGAACGAACCA TTACACGATCATGGTCGTCTCTTTGTCAAAAAGAAACTACTAAGGCTGGA CTTTAAAAAAATGTTGGTTTGCTGTCTCCTGACCATTAAAATTTGGAGGT GAGGCTTATTGTATGGAGCTGAGCATTGGTGTTTGACATAAGCTATTTTT CGAAAATTACGTGGATTTCATGCGAGATGTGTCGTTTAAATTTGAAACAT ACGATAATCCATAGGATATCTACTACAGATCTCTTATATCGAACTGGATT ACTCACTATTGAGGTTTATGCGACGTTTATACGACGTCATACGTCGACAA CTTCTCACTTCCTCCTCCTCCTCCATAAGTGCAGATAAGCTTAGGTGACT TTGCAGATACTTAAATTCGCAGATGAATGGTAGATAATAATTTGTTTCCT TCATTTCATTTATAACAGGACAAAGTGTGTCACAACCTTCGTATTACATC ACTACAAGACCTGATCACACAACTGGATGAATCAGGACAACTTCCATTCG CGTACGACGAAAAAGAAGGCTCGTACAAAGCAGTTCAAGCGACTCAAGTC TTCACTTCACCTGTCAAACAGAAGAAAGAATTTGATGATGAAGGAGGTGA TAACATGGACGTAAGTTGAACGTTATATCAACTCTAAAGGAGGATATTTT ACATGGATAGCCCACTAATCTAGGACTTTTTAGACAGTCTTTTGATTGTT TTCATGGGGTCCACGGCCAGCCGGCTCGGCTATCTATGAACTGAACAGAG CATTGGAAGAAGCGGGGATTCGAACTGCGAACGCCTGGTTTGAGACGCTG ATGCCTTGACCACTCGGGCATCGCTCCTCAAAATAGCATGCCATGTCACT GTTTGTGAATGGCTATCTCTCTTTGTTATTCTATATAAATTATGTTTCTT TTATATTATCGGACTACGGTCAATGATTGTTTAGAAAAGAGTTTCGAAAG TTCTTAAAAAAGCAAGAAAGGCTAAATATTAAATTGTCAGAATCTCAATT ATCATTTTTCATTTTTATACATTTTCAATTTCGCCTTCACTTGTAATAAC CTTTCTACTTTTATACTATTGATATTATACATTATATTTGGTATTACATT ATATAATCTAGATAACAGAAGATGTGATCATAGAAGATAGTGACGACGAA CAAGATCAAGAAGAAATCGAACTTTCAGGGTATGTAGTAATATGTATGAT AATATTTTTGTCTTCTCTCAAATGAAAATCTTATGGTAATAAAAATCATA CAATTTGAAATAGGAATGAAAATCATAGATTGGGCTTTTCCAGAAAAAAG TTGAAAATGGGGGATGGATGATTTAAATTTTTTTGAAAATTTGCCCCTGG ACATTGTGACTTTTCCCCCCCCCCCCTCCAGACAGCAGGTCTAATCCCCC GGGCATTAGTTGACCCCCTGGACATTCAAAATTGCCCTCAAAAAGAGCTA AATTACCCCCAAACAGCGCAAGTTTACCCATCTGACAAGGTAAATTTTGT AGATTTTTCACTACCCCCGGACACTATATCCTCCATCCCCATATACGGAC ATTTTCTGGAAGGGCTCATTCAACATACGTATTTACTCGTATTATAATTA ATTTATACTCTTATACGTTTTAGTGACCACTCACAGTTAGATCAACTCAG GGTATGTCATCATCATGTTTTGTACCTCAATTCTTAAAGACAAAGTATAA CGAGGCATTGCCCTTCTCGTTCTGACCTATAATGACTACTCATTATATTT TCATCATGCCCCCCCCCAATTACCAGAACTAGTAGAGTTGTTACTCCAGC TCAAAATCTAACCATTATTTATTAAAGAGATTTTCCGTAGATTTTTTCGT GAGTTTCCCTTTCTGTTTTATAGGCACAAAAAGCAGATTTAGCGCGCCAA CTGGAAGAGAATGAACAGAAAAGACAAGCGGCTGTGGTAAGAACGTTATT CTCTTGATCATTATTATCAAATTGCCTGATTAGATGACGCTATATTCATC GAGACTTATGGTGGCAAGCTTTAAGGGAAAGCAACCGTAGTGCAGTGGCA GAGCATCCGGCTACGGTGTGCAAGGTTGTGGGTTCGATCCCCAGCCAGGT CATAACAAAGATTCCCAAAATGGTACTTGATGCCTCTCTGCTTGATGCTC AGCAACTAAGAGAAGGATCAAGGGTAAGTGGGGAAATCCAGGGAGAAAGA GTGGCGCCCTCCCCTACCTTTGGATAGACAGCTATCGAAAGAGGAGCCTT TGGGTCGTTTCCGACTGCGGTCGCAGACTTACTTATAAGGGAAACTGTAT AGTTTATTGAGAACTACACCAACTTGTTAAATATTAACTTTGAGTGTCTG GTATGATATCAGTATTTGTTTTTTACTCTTACCCTTTTCAAAAATGTTCC CTGTATATTTTTTAGGCTGTGTTGGAAACACACAAATCAGAGGGGCGTGT GATCTCTGAAAACTCACCCAACCATTTAGTGCTTGATACAAACTGCTTCA TCGACTACCTACAATACATTCAATATTTGCTATCGTCCAAAGGATTCACT ATTATTGTCCCTCTTATAGGTAAGGATTAAGACCGGCGCAAATGCGTCCA TCATTTCATGCAACAATAATGTTTGATCCAATATTGGATGCATTTGTGCC AGCCTTAAGTGACATTTTTTTCGTGATCTGAAATCATATGGAGACGTAAT TTTTAACCATTTAAATCTTTTGCACTGATTATCTGATCTAATAACACTGA AAACGGTAATTTCGATAGAAACTGAGAAGTTATAATAAAGTAAATTTTAT TATGCTTATGCTTGTAAACAAATTAAATCTGATCTGAGAAAGAATTACAA TAATATGTAACTGAATCGGTATGTCTCAGAAGGTTCCTCCTCGAATTACA GCCATGAGTATGAATTATCATCAGAGACCAAAAGGTCTCGCTTCAAAATG GTTTCTTGGTGTTTGTTGGTTCGAGGAATCTCCTTGCAAAAGACGTACTG TACGTCGAACTTCCATTAAATTCATTTGGATCACACAGTATTCCCTGGCT TTGGTTAATAGCCGGTAAGCGATATGATGGGGCTATCTGTTTGGAACGAA ACCTTTCTAGTACGTGTATAGTATAGAAACTTGTCTCTTTGTAGCTGTTA TAAATTTCTGTCTCTTTAGCTGTCGGCATCTGTTGATGCTCGCGGAAACT CAATCGAGTTAAGAGCCGCGGTTTTCGTTCTTGGAATCGGAGTGGCGTTT GCCGACCGCTATAGCAATTTGTTTCTTGGTGCGGTGTTTTTGTTTGATGG CGGTGGTGAGCGGATCCAGGCTTGTGATGATGGCTTGGTGACTTCGGAAT GACTAGCCTGTCAACGTTGTTTCGTTTCGATGACGTAATGTTTCTACTTC GTTGGAAAGATGGTCGGAGTGTATCTGTGACTGGCAACATTTTAACTGTT TGACGACACTTTTTCTGTGTTGCTTGCTTTACACTTTGAGATTACGTTTG GTAAAATTAGGAGAAATTCTTTCAGCCTTCTATTTCGTTTTAAAGAGTTG ATATTTTGATAAAAAATCGATTTTTTTTATCAAAAGCTCGAATTCATAAA CATGATGTAGCATTTATGAAATCTTGGATGACTAAATGAGTTGAATTTTA TGAAAGTAATTCTGGTTCTTGATTCGAATCCTGTTCATAAAAATCTCAAC TTTTTCCCAAACACTTTATCCTTCCATCTTTGTATTATTTTGATCTTGAA CCTCTCTATACCAAGCTCACATTTTGATTTTTAACGAGGTGAAAACGTTT AAAATTCCCTATGCGAACCTTGGTCACTCAATTAAAAGTGTATCAATTTT CTATCAATTTTCTAACGAATGGAGTAAAATTCGGATTTCTTAACAAACTC TCTACAGAGCTTTTTCATGTTTTGTTTTTAAGTTACGTAATTTCCGCCAT TATGGAAGCAAACGTTATCATAGGCCATTTCACAGTCGAAATGGATCATG GGTAATCAGGACTGATTGCGCCTCCATAACGGCTTTCTGTTGGCTAGACG CAATAATCTTCAGAAAATTTCGAAACTCTGGACCAATAGTAAGTCGTCAT TAGCGCGCAGTGGTCCTGATTACCCATTACGCTTTGCGACTGTGAAATGG CCTATTGGATCACCTCTACAAATTCGAACGTTTGCTTCCATAATGGCTTC CATAACTTACCAAAACATGAAAGACCTTCATTTTCTTCCGTCCCTTTTTC AGAAAAGAATATGAATTTTTTAAACCTTTCTTAAATTTCCCTCTGAATTT CTTTTATATTCAACATTGGAAATATTCTTTTCTCATTTTCCCTCCTCATC TTTCCAAATAATTCTTGAAAATGTTTTAAAATATTGTTACATTTTTAGTT GTCCGTGCTGAGAGAAAAGAGAGACCAAAATTTCTCCATTTTGTGGGTTT TTGTCACTCTTTCGTTTTCAATGAAACCACTTTACTGAAGAATTTCCTTT TATCAAATTGGGTGATATGGATGGATTTTTTTCTATAAAAAGGGATTATT TAATGACTATTAACTATCACTTCTTAAGCTCTTCCTTCGCTTTAAATGCT CATCGATCCCCAAATAACTTTTATTATTATTGTTCTTACCGTCTCTGGAA CGTTCACGACAAACTGTCTTGATTGTCATTGAAATATTTTTTGATCAACG GACTCGTTCACTGTACTTTCAAACGAACACAAGTGAAGCGACCTCGATCC ATTAGGGAACTGCTAAAACAAGATTCGCAACATTATTTTTCCTACTGAGC TGCACTGTTCATGCTTGTGAAACTCATTTGATGATAAGTTTGGGTTTTCG AACTAAATCCATTGGCATAAACGTTTTTCATAGCCTAAAAATGTTCGTAA TCTGTTCTTATTTTCACCATTACAGCATTTTGCCCATTGTCCTAAGAAAT CGGGTGTTTTAGAGTCCACAAAGCCTTAAAATGTTCTTTTAACTTGTTCT TGATATTTTGGCCAGCGAAATCTGGTGTTCTTATATAGTTTGTTCTTATA AAAAACGTGTATAATTATCTTCTCATTCAAGTGATCAACGAGTTAGATGG CTTAAAGAAAGGAACAGTACTCGATACAAACCGTTCGTCACGTGTTCGAA ATGTCAGGGATGCTGCAAGGTAATTTTCTATGGGTTGATATCACTTCTGG GACGGTAGATTTTGTTTTACCACTCTTAAAAAGCACTACATACTAGCATT CGATCTACAACTTAATCATACAGACAGCGGGTACGTCAATAAAGAAACCT CAAATTAAAAATTTAAGTAGCATTATCTACTGACTTTTAGGGCTTCAAAA TTTGCGGAAACTGATTGATCATCATAAAACATAAAACTACGTCAAAATTT TACTCTTTTAGATTTTAAGGAAGTTTATTTCTAATGTTAGCGCGGGGGAT ATCGAAGGGCGACGCCTTTGCTCACCTAAACCGACGACGGTATTTTGGTG TTTTTACCTTCGTCGAGGACCGTGACTTTGGTGACATGTCAACTTTGCTT TATACCGTCTCTAAACTCGCTGTTAATGAATTAATCAACTAATCATCCCT CCAATCTCTTCTTTCCAACAGACAAGCCATTGATTTCCTTGAAGATCGGT TCAGTGTTTACGATTCAAACTTACGAGCAATAACAAGTAGTGGAAGTGAG ATGACCACCATCGCTTTCCGTTCGGAAGAACTCTCTCAAGATAGGGTGAG TTGCTGACCTTTAGTTTAGACGGCCCACTTTCCGCCCTGCCTATCCTAAT TATATGAACTAATAAGGGCAGAAAGTCGATGAATTGCCACCTTTTGACGT AAATGTAATGACTTCTTTCAATGTTTTTCAAGCAAAGATTTTAATTGCCA ACTTTCTTCCCAGGTATTGCCTACCCTAACAATTGAAAAAGGTAGGGCAG AAACTCGGCCGTCTAAACTAGAGCTGAGAAATATTACGTACTCAAGGTTA TAAACTTACTTCACGCTGATACTTGGCGTTGTTTTAATTCATTCTTTCTT TTTACAGGGGACAAATGATGACGTCATTTTATCTTGCTGTTTGAAATATT GTAAAGAACATTTCAGTTATGAAGGTATGTTGTTGATTAGTACATCCACG GTGGGGATGAAAATTTCTATCGAAATCCCGATGGGGATATAAATTCTATT ATATATCCTAGGTCTAAAAAATCCTAAGGGGATTGGTTTTAGAGTGCAAT TTTCCATTGAATTTCAAATGGGAAAGAAAATAAAGTCAATTTTCTAGTTG GGCTGAAATTGCATGGTATTTTTCCTACCGGTACGAAATTTGCGAGTGGG TAGGGGTCCAGATCTGTGACACGTGGATCTTGTTATCATTTGACGTTTTC CGCCCAAAGTTAACTTAAAGCTTTAACCATAAAGCTTTCCAGGTAATGCT AAACTTTTCTTGTTTTCATAGGCACTTCGAAGATTGTTCGTAGAGAAGTT GTTTTGCTGACCAATGATCGAAATCTCCGCGTCAAAGCTCATTCAAGATA TGTCCCTACGGTTCCCATGGTTACCTTCATGAAAATGGCGCAATTGCTGT GATGTGATTGGTTAATGATTTCCAAGATGATGTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048562TCONS_00048562Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048562-proteinTCONS_00048562-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_143supercontigscaffold_143:481479..488963 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.18 4.21 1.18 0.97 24.06 19.05 11.83 14.89 8.9 9.86 10.66 7.08 6.19 6.02 7.06 7.73 14.52 11.99 4.26 5.62 7.28 7.3 12.67 12.35 24.25 21.77 4.92 3.06 9.55 9.26