XLOC_030928 (gene) - C. hemisphaerica

Overview
NameXLOC_030928
Unique NameXLOC_030928
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_145:206676..213687-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030928 ID=XLOC_030928|Name=XLOC_030928|organism=Clytia hemisphaerica|type=gene|length=7012bp|location=Sequence derived from alignment at scaffold_145:206676..213687- (Clytia hemisphaerica)
TTTATTTTGAAACTTTTTCGAAAGAAAAAGTAGCAAATAACTTTTTACGC CAATAACTATCATGCTCTTAAGTTTTCTTCTCAATATTTTACTATTATTT GCCAAAGCTGACGGAGAACAATTATGGGAACCGAAAAATAGTCAGATTTC AGTTCACAATGAATCAGCTTTGGTGATAGTCAACCAGATGAGATTTCGAG ATTTAAAAACCGGATATATGTTGGGCCAATTTGGCCTTATGCATGTGGTC AACTCAATGCCTGAATGTGCAGCTGCTTGTATGGATACGGATGGTTGTGT CAATTGGGCATTTTCAGATGGCAATCAATGTCATACTTATACATTTGCGT TACGCACAAGACCAAGGACCACATATTGGGGATTTTGGGGTAGGACATTT GAGATAAAGGTATGAAGTTTTGGGATATTTTTATGTTAAACCATGGGATC ATTAAACCCTGAAAGGATAATTTTGATAAGAATAAAATCACCAAGCTTTC AAAAAGACTAGAGAATGCTCAGGTGGTAGTACATGGCTTTGAAGGTATGG TTGTATTAATACACTCTTCTCGAGATGCATAAATTTATTGTTGTCCTCGT TTTCAAACAGATTTTATTACTATGAAATTATACATTTAAACCAATTTAAA TTCCTAAAAGGCAACATTAACTCTAAAACAAAAGTTCTTGAAATTCAAAA TGTCTCATGAGGTGTAAACAACACAATTATCGTTGTGAATAAGTAATTTT ATAGCAATAAAATCTGTTTGAAAACGAGGACAACAATAAATTTATGCATC TCGAGAAGAGTGTATTAATCTTTTGAGATAAAAGTGAGTGTTTTATTTTT TTTTCTTTGCTGCATTTACCTGGGATTCGCAATCTCTGCTGCATTCATAT TCATTCACGATCAATGTTTTATAATTATCCACTGCCACCATAACATATTG CGATATGGATGTATTCTGGAAATTCTCTAGCTTTTTTTTAACTTCTTTTT AGAATCCATGCACTGAAAGTTTGAATTTATGCGAACACGGCAGTATTTGT TCACCAGATCGTAACACCAAAACGTACCAATGCATCAACTGCCCTCCCCC CTATACTGGAAAACATTGCAATGAAACTACAGGTATGAAGCGCCCAGCTG GCACACAACGTTGTTTCAACGTTTATCAAACAACGTTTATCTAACGTTCA CAACGTCCATTTAACGTTAAATGGACGTTGAAACTACAGGTATGAAATGT AAACCTGTTTAAAAACATACCTCGCACATGACATAATCCGAAGGACTTTG CCGGGGCGGACTGACCCTGACGGCCGACAGGGACGTGCCGCTGGAGTTTG ATATGTGGACCCTGTCAGAGAAAAATTTTCGGAAAATTGAGACTCTGTTA GAACGAAAAATCTAAAATTTTCTTATTTTCACCATGAAAAGTGGCAAAAA TCACTGAAAAGTGACTGAAAGTAGACGAAAAAAACATTTCCCACCCTGAA AATTGTCTGAAATAACTAGAAGTCAACCCTGTCAGATACACTTCTTTAAA ATTAGTAGATCTGGGACTCTGTCAGATATCTTCAGAGCCTAAAGAAGTGA CCCTGACCAGCGACAGGTCCCCGTACCCTATTTTGCCTAGGTGTCCCCCG GATCTTCCCCAGAAAATAGGACTACTAAAGAAACTATTATCGTGAGTGTA TCAATAGGCTTTTATATAATAATATATATATTATGTAAATGATTTTTAGG CCAAAGAACAAAATTTCCGGGTTAGAAATTGTAATCATAACATAGACTAT TAGAAACAAACCTTTCTTTGAAGGAATTCTTTATCATCAGAAACAATGCA TGGTTTTGTGTTTCGGCCACCATCAGCTTTTTTATATTTACGTTATGGTG CTCCTATACTAGCTGCAGTCTTGTAGAGGTCTGCCATTTAGATTAATCAG TAAAGCCAATAAAACAGGGATTATATGGAACGAGGTTGCTTGAAGTTGAT GAAAAAATCTTTCTTTACAAAAACTTTTTTCAAGATCTGGACGAGGAACT ACCCTACCAACAATACGATATAATTCGAGAATACTTCTCGAAATCCAAAT TGTGAAATGGACGATACTAAAGCTAATTTGCCTATTCTTTTCATTTTATT TTCAGAATTAATCGCTCCCACAGTTTTACATGATGGTAAGGAATTGTTTT GGAAGTGTTGACTTCAATTTTGTTTGAAAAAATCTTTTCTTTCCTTGTGT GTCGGGCTCTTTTGTCTTTTGATCATAAATATATCATCGATCATCGTCCC CAAACATAGAGCTGAGTAAAAGCCAGTTGATAAACGAGTACTGCACGAAA TGCTCTCCGTTGTCTTTAATTTTGACGAATTTGAATCAATATCAAATAGT GGAGTAGGCTAGCACATAAAAAACGGACGATACTTCAAATTGTGATAGAG CTCTGATATTTTGCACAGAGGTTCTACCGTGAAAAGCACAGGTCGAAATC ATATATCGACGCTGTGCCGACGAATCGAGATTCTATTCAGCGCGNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN GAGAATCATAACATAAAGTCTGTCTATTATTTCGATTCAATTAAAGTGAT ATTTCCATAATTAATAGTTTAGTAATTACTGTTATACATTTGGGGATCAT GTAAAAGATTTCTTTCGAAAGAGACTCACTTCAATTACACTTGGAGGTTT CTGGGGAATTCGTAAATAGTAAACTGTATACTGATACAGTCTGCTAGACA TTAATAAGGTAATATTTGCTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTTCTACAGTGATTAGATTGACACATGCGCGATAAAATTTCTATTAT TGGTCTTCAGAGGTTGATATATTCTTTGAAAACTTAACCTCTGATACTCA GGGTACAGAGGTTCCTCATGAAGTAAAAAAAATAAAAATTAAGAAGGAAA CTCATAAAAATGATGTTTCTGTTGATGTCAGCACAATCCTATGTCGGCTA TCCCGGGAAAAATAGCGAGAAATTACGGAAAAGGTAGAAGAATCTTAGTG CAGCAAAGTGAATCTTATGCAGAACGACGGTAGAGCTTTTCGTATAGCTC AAAATAATTTATGAAAAGGCCTATTGCGACATCTGTTGTCCATCAATTTG TTTCTAACCTGATAACAGATGGTCATAATTTTTTACGCGCATGGTAAACC TTAGACGATCCTATCGCACATTATCATTGAAAAAGGTAATAATTCAGGAA GTGGGATAAATTTGAAAACGAGCTTAGTTCGGGGCGGAGTAAATAATAAA TTTGACGTCAAACAGAAAGGTTGTGCTCTTCGTTTATTTTTCAAAATGAA GAATTTTCAATAAAATTTTAAAAATATGGAAAAAATAGCCAAATTTCNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNAAAAATTATATTTTAAAAAGATTTTTT GTACAAGAACGGTTTAGAGGCCCTTGTGCCTCAACTGTAATCACCTTACA AATTGTAAAGTAGCGTTGACTTTTATCAGCCTTTGTTGCTACCTGTTCGT CAACTTGAAATAAACTATTACATACATACATACATGGCGGAGGTGTTTAC AGTTTGTTCCAAACTTTTTCTCGGAAATCGCCCTGCCGCCCTGACTCTGC GCATATATATAGTGAAGATATGTAATATCTGTCATTTTAGAAAAAGAAAA GTATTGATATATAAATAACTCAAACTGATAAAAACGAAAAAAGTTAAGAA TATTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNCAAATGAAGATAGAAGAAAAGTAATAGTGGAGAAACAATGAATTGCAA AAAACTTTTTTGATAAACACACTTCCGTAAGTTCATCAAAATACATACAA AATTGGGACAAATACAAAAGCAAACATATATATTTTCCCGCGTTCACTGA CCCTCTAAACGGACGATAGCATCGTCTAGGTAAACCTCTAAAGAAACAAG AATCTCATTTCGTGCCGCGATGTCAAAAATTAAATTTTTCTGATACAGCG CCTTTTTTAAACACAATCACACAACTTTGTTGTCATTCCCAGTCCTATTA GACGAGCACGGTCCTATCAAAATTGAAATTGCATATTCGTCAGTTCGTTT ATTATCATACATCCCTTTAGTGCTTCAGGGTGGAACGCAGAAAAAAACGG CGATCTGATTTCAGGTTATTTGTTTCTTATTACACTAGATATTTTGTCGG GTCGCAACAAGTCATGTCGCACTTTATGGTACCATTTCGATATACCGAAT GCATGGATCTCTTACTTCACACATCCTTGGAACGATGAACGAAAAATCAA AATCAGATGCTATAGTAAGTCACCCAGCTGGGACACAACGTTGCTTCAAC GTTTATTTTTAACGTTCACAACGTCCATAGATGAACGTTGAAACAACGTT GTGTGCCAGCTGGGCACCACTTTTTGACTTTACTGATGAATGTTGGTACA ATCGAAAATCGTACTTTTCGTGAGCGAGTGAACTAAGGGGCTGGGTTTGA GTTTGTTAGTACAATATTTAATATTTAAATTTAGGATGGGTTGGGAGACT TCCAGGCTATATTCTGAGCCTTATTGGACTATTTTTGAACTTTTGGATCC TCAGATTCTAAGGTCCTAAGTCAGAGTTAAAACTCTACCCTTCGAACCTA CTTTAGAGCACTTACAAATCGATTGTGATTTCAAAACTTCCTGGGGAGTA ACCCTTTTTTCTCAAATATTATGACCTTGATTGTAACTCACAGCTGTCGA TATTTACGATCTGCAAAAGTTTCGTAGATTGTAATGTTTTTTTTCTCTTT TAAGGATATACCAGCATGATAACTACGGTTATGAATGACAACCAGCCCGT TACAGATTTGACAGCTGACCACCTAGTGGACGGGCTTGACTTGACGGTAC CTAATTTTAGAGCAATGACATCCTTTATGCAAGCCTATGAAAAATTAGTA CAGTTCGATACACTGGTTTTTCAATGTTATCGGCAAAATATGACTAATAT TAATTTAAAAAGCGTATACTTTCATCTCTCAATTTTAAATTATTTTATTA ACGCAACTAATACACGACCAAAATTCGCTAGTGAGTGGTTGCTGACAGTT GACAACAAACCCTGGAATGGGGCAACGTCTGATGGTTTTATATCCAACAG CAATGTCGATGTCGAAGAGAGATTCTATAAGAATTTATTCAAAGCTAGTG ATGGACTTGAAATTACTTTCTCAGATAATCTTGGCAAATGTTTATCTATT GAAGATGATTGGCATTCCTATACTGTGCTAATTCAATAAAACTGATTCAT AACTTATCGATCATTTTTTTTCGATCCAGCATTAATTTTTATTTCATTTT TATTGTATTTTTATTGATTTTTATACATTTGCACAATATTTTTTAGCGAT TTACACAAAATTTTTTTTCGGGGTATCAATGAAAGTTTCCGGGATTTTAT AACTTAGAGGTAGAGTTGAACACGTCTTTTTTTATAAGAACATCCAAAAG TTTTGAAGCCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048677TCONS_00048677Clytia hemisphaericatranscript
TCONS_00048676TCONS_00048676Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048676-proteinTCONS_00048676-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_145supercontigscaffold_145:206676..213687 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.06 0 0.07 0.36 0.31 0.19 0.25 0.45 0.74 0.91 0.09 7.37 7.31 1.5 1.57 0.85 0.65 8.55 8.84 1.4 1.45 1.24 2.31 2.07 2.89 0.44 0.27 0.22 0.37