XLOC_030962 (gene) - C. hemisphaerica

Overview
NameXLOC_030962
Unique NameXLOC_030962
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_145:402814..406861-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030962 ID=XLOC_030962|Name=XLOC_030962|organism=Clytia hemisphaerica|type=gene|length=4048bp|location=Sequence derived from alignment at scaffold_145:402814..406861- (Clytia hemisphaerica)
NAAAATTTAAAATTTGAAAAATCTTCTGGAGTTGCTACGCCTGGGTCAAC CCATGCAATGTGAGGGGAATTGGGTATATAGTCAGTTCAAGGTGCTGACG GGATGCTTACTCAAAGCATCTATAGTTGCGAGAAAAGGCTCCCAGAGCCT CCTGTAACTCAACCATAATAGATAGATAGATAAATAGACAGTTCCAGTTA CTTATAGTCTACAGTGTTATAGATTTCCCAACCAGGGACGATCAAGAGTG AGGAAAAGTCCTAGATAGACCTTGTCATCTTTCCATATGCCAGTCAAAGG ATTTATGACAAATTAGGATACCTTTCCTACAGCTAATACCTCCTAATTAG TAGACCGGGAGAGTACCGTGAGATCNCTCCTACAGCTTATACCTCCTAAT TAGTAGACCGGGAGAGTACCGTGAGATCAGGTAACTTGCATCAGTGGAGG CCAACATGCATTGATCTCAAATAAATAAAATACATTAAATTAAAAAATAA AAGTTAAATAAAAATAAAAATGGTAGAGTTAAGTTAGAGTTGTGTAGTTG CTTTGTTTTCAAATTTTGCTGCTTTGATTGGTCAGTCATTTGATGGGTAT GCAAGTTTCCCTCCACTGATGCAAGTTACCCAACTTCACGGTAGTATCCA AATTAGGAGATTCAGATATGCTAAATAAGAGAGCAGACACTTTGACCTAA ATTGTTTCAGGTAGACCTTTTCGCCTTTCCATTCGCCATATTGAATTGTA TGCAAAAATTATGGTGGCCGAATTGCCGTGGTGAGAATGCATTGAAAGAA AATATACAAAACCTACCTACCTCCATTAATTTTTGTGTGCCTTTTATTTT TGCGCAGAAGACGTGCGCTAAGAAATAAAAGGCGTGCGAAATAGGCCTTA TTTTTGCGCACATGATCGCGCAAAAATTAAAGGGTGTGCAAATTAGTAAT TGTTCTGAACGTTTAGAAATCTTATCTTAGGGCTGTTTTAATAAAATGGA ACCTTGTTCACGATAATTATGCTTCTGGGATGTAAAATCTAGCTTGAATA CGTACGCTGAAAGTGAGTAAAACTCACTTTAAATTGTCAAAAACACTCAG AAAATATCCAAGAAATTGCAAGCTGCGCGAAAATTAAAGGCGCAAAAATT AAAGGCACAAAAATTAAAGGAGCGCAAAAATTAATTTTACTAACGTGTTG GACCTGACTTTGTATATCAAAACGGTGGTTTCGATATTTTCTTGCACGGG AAAGAATGTGTGATGTCATAATAACTTTTTCTTGTGTTTTTTTACTATAA ACGCTGTTTTTACCAAAATTTCAGCAATTACAGGAGGGGCAGCGTTTGAT AATCGGACGCTAAAAGGGCATAAAAAATGGCCTGGCTTATCCAGCAGTGC GCAGATCTAGGAGGGTGTCTTCTCCCGTAAATCTTTTTCTTGGGAAGTTG TTGTCCAAATTAGTTTTCAAGGATGGCTCGGTTCAAATTTTTTATCTATA TATATGGCTCAAAATTTGGGTAATTTCTCAAAGTTTTTGAAAATATGAAT TTCATTAAAAAGCGCCGGTTTATTTTATCTTAAATTTTTACTGCGCATTC TTTTGCTTGCAAGTGAAGTAAATGATAAAGCGCTTTGGCAGCATTAATCT NGGAATTTTAATGTATGCAAAAAGAAAGTATTACTATACTGTAGTGTAAT CTTGTAGAAGAAAGATTAAATTAGCTTTTCTTGAAAACTAAAAATAATCA TATTCACTCATCTCTTAGAACAAGCACTTCAAAAAACCATAACATTAGAC ATAAACTCAAGCTGAAAAATCACCAGCGAAGGTACAAAAATAATCCTTAT TCGGCTGACGGAAAATTATTCTCTTGGGAATAGAACCACCAAATGATCTA ATCAAAACATTGATCTGATCCCCCTGATTTACAGCAGTTTTTACTAACGT GTTGGACCTGACTTTGTATATCAAAACGGTGGTTTCGATATTTTCTTGCA CGGGAAAGAATGTGTGATGTCATAATAACTTTTTCTTGTGTTTTTTTACT ATAAACGCTGTTTTTACCAAAATTTCAGCAATTACAGGAGGGGCAGCGCA GGGCAGCGTTTGATAACCGGACGCTAATAGGGCATAAAAAATGGCCTGGC TTATCCAGCAGTGCGCGGATCTAGGAGGGTGTCTTCTCCCGTAAATCATT TTCTTGGGAAGTTGTTGTCCAAATTAGTTTTCAAGGATGGCTCGGTTAAA ATCTTTTATCTATATATAGTATGAAAAAATAAAATGTTTTCTCCTGTCAG AACTACAAACAACAAAGAGTGGCCGAATTCTTTTTCCTCTTAGAGAGACG ATGTTACAATGAAAGGGTAATTAGTCCTCTCTGGGTCCCTCTGTCTTTAT CCTGGCTTGGGACAGGCTGACTGGCATTTAAGACAGTCAGGCGACATTAC CCCAGCGGCCTGTACAAGATGACAACAAACTCCAGGTAGACTGACAGCCA TTATATATGGCTCAAAATTTAGGTAATTTCTCAAAGTTTTTGAAAATATG AATTTGATTAAAAAGCGCCGGTTTATTTTATCATAAATTTTTACTGCGCA TTCTTTTGCTTGCAAGTGAAGTAAACAATAAAGCGCTTGGCAGCATTAAT CTTTGATATGCATTTTGGCAGGACGCTGGTGTGAATAACTGATTGGCCTT CATTTTTGCATAAGATGGCAAATGGAAAGACGAAGAGCTCTATTTTCCCC AATATTTTCAAATAGACATTTTTCTAAAGCTGCGATACCATTTTGACTCA TGATAATAATTTTTACCATGAAAACATTCCAAATAACTCCATTATAACCT AATAGTAGATCACCTTCCACCTGTTTAATTTTAATCTTGTTGTGTTTCTT AAAAAGAGTCCGCACAGCTCGTGCCTAAAAATACACATGAAATCATTAGG TTGCCAAGTTCCAGAATGTCAAAAGCCTAATGACTGTGTCTGTACTTTCT AGTTTAGTGTGTGGACACATAAAGTAAAATCAATAAATATAGAAATCAAG CCCTAAAAAAAGACAGTCATCTCAATTTAACTGTGCTATAAATTTGTAGT TGCTTAAAAATAAATGGCTGGTATTGATTTAGTTTCACCTGAAGGTTTGC GGTTGGATGGTAGAAAATGTCACGAGCTTAGGAAAATTATCTGCAAAAAA GGAATATTTGTCCAAGCAGATGGATCTGCCTCCATTGAGCAAGGTAACAC AAAAGTTGTGGCAAGTGTATATGGGCCACATGAAGTTACCGTTCGATCAA AAGCTCTGCATGATTCATGTGTTATAAATTGTCAGTATAGAATGGCATCA TTCAGCACAAGTGAGCGTAAACATCGAAATAAAGGGGACAGAAAATCAAC GGACATTTCACTGATGCTTTCAAAGATGTTCGAAACTGCCATAATGAAAG AATTGTATCCTCGCTCACAAATCGATATTTATATACAAGTGATTCAATCT GATGGAGGAAACATAGCAGCATCAATAAACGCTGCCACCCTTGCACTCAT TGATGCTGGACTTCCAATGAAGGACTTTGTTTGTGCTTGCTCATCAAGTT ATGTTCGAGAAAATTTTCTAGCTGATATAAATTATCTGGAGGAGAGTTCT GGTGTATCTAGGGTTACATTAGGGATGCTTCCTAAGAGTGAAAAAGTTGT GTTTTTTCAAATGGATTCTCGTTTACATAAAGACCATTTAGAAAACTTAT TAGAGACCACCAAAGCTGCTTGTTTGGATGTGTGGAGTGTCTTGAGAGAA GCTGTGAAAGAACACTCGCATAAACAAGCTATCACCCTGGTTGTTTGAAA TGTGAAACTATAATGCACTTTTATTATTTGTATATAATGTGATTTGTTTC AGAAAAGATTTTTTAGATTATTTCCATGTTGTTCCTTTGTTATAACTTAC AGTATATGATTTTTGTGTCCTTGGAACTTTAAAAAGTTTCTTTTATCTGA TCTTAGCAAAGCCTTTAAAAATATTTCTTTTCTTGATCAAAAAAAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048717TCONS_00048717Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048717-proteinTCONS_00048717-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_145supercontigscaffold_145:402814..406861 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
EXOSC4exosome complex component RRP41 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.95 5.57 5.74 6.66 13.83 11.12 7.25 8.52 6.96 7.37 6.07 5.06 5 5.32 5.57 5.54 8.21 6.88 2.94 3.42 7.1 6.7 14.78 12.53 5.34 5.32 5.67 5.03 10.22 11.03