XLOC_030988 (gene) - C. hemisphaerica

Overview
NameXLOC_030988
Unique NameXLOC_030988
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_146:306343..310476-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_030988 ID=XLOC_030988|Name=XLOC_030988|organism=Clytia hemisphaerica|type=gene|length=4134bp|location=Sequence derived from alignment at scaffold_146:306343..310476- (Clytia hemisphaerica)
CCGTCAACGATACTCTAACATTCGATATGCTCCCTTATTCGATGAAAATC
CGCTTCCACTTGAAAATCGAATTAGAGAGCGTCGACTTTACTTTTATTTG
TAGGTGTCGTGCAAGGTTTGGTGACCGGTATCCGTGGTTTGTGTAACGGA
ATGGGTCCTGCATTGTACGGAGTCATCTTTTACATTTTTCACGTCAACCT
GACGGATAACATTGGAACCGCCACAGCAATCCCGCCCGCCGCCCCTTCAA
TGAAACCATCCAATGCTTCTTTACTGTCACATAGGCCGGGTGTTAAATCC
GTATCTGTAAGACTCATTTTTTGAAACCTTTTTTTTTTTAGTGTGAAAAC
ATTTTCTTAACGTCTTCATTGACAACTCAATATACTTAGCTTCTAGTCGT
GATAAGAATTAAAAAAAACATCAGTTGATGCTGAAGGATTGCTAAACTTT
CTAATTCCCGGCAAAACTTTTCGTTTGCTTCTTAAGGGCTCTGACCATAG
TGAATTTTTCATAATTGCCGTGTTTAAAATGTGTTTTCTGACTGATGTAA
CCAACAAAACTATGGCATGTTATACATTTTCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAGACAAACTATTCCTGAATCTGAAAATTCAAAAAT
TGCATTGAAAAAATTTGATGAAGAAGAAACTGAAGACTTTTGCGAGGAAG
AGTATTTCAACTTTGCAGAGCTTAGTTTCGGCGAAGAAAAAACATTTTGA
AAAATTTTTTTGCAGCAGATGGTGTATCTTTTACCGAACAATAAAAATTT
TTGCGGAAAATTTTTGTAAATGCTTCTTTGTCTCGAAATCTTCAAAATAG
TGGTTTTTCATCAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
AGTTCGAAACAAAAAGGTTAATTACCCATTAAAACTTAGCACTTTTTATA
AAAGAAGGTGATGCAACATATTATTAACGTCTTTTCAAAGTTCATAACGT
CATCTTTGCAATTAAGTTCTTAATTACTCTTAAGGGGTTTGATTAAAAAG
CAATTTATAAAGGCAATTCTTTGTTAAAAGTGTTAAAGAATCTAAAACAT
AACTTTTATGTTCAGATAATGAAATCAATTTTCTGACTATGGTCAGAGCC
CTTAAGCAACGTTAAAAGACCAACAACGCTCGGGGTAGGAACAAAAGTAG
ATACAACTTTGTTAGGTAGTCATTCCATAGGCCCTTGTGTGTTTTAAACG
CATTTGTACGCAGCAGAATAATTATTTTTGCCGGTATGCCCGCAAAAAAG
CAGAAATTTGTCCCCGGTAATGAGAACGTTGAGCCCTCCTATCGTTTGAT
GTTTTTCCGGCAAAAATAATTATTGTGCTGTATACAAATAAGAAGGACTT
ACCTTTTCGTCACTTAACATGGAAACAACCTAGTCGATCGACTTATAATC
TTATTCGGTCAGGGTTCATTCCATAATTTAAATTAAGGGATCTAACCATA
GTCAAAAAATTGATTTTGGTACTTGAGCATAAAAGTTATGTTTCAGGTTC
TTTTACACTTTTAACAAAGAATTGCCTTTGCAAATTGCTTTTCTTCTTCG
AAAAGTTGAAATACTGTTCGTTGCAAAAGTCTTCATTTTCTTCTTCATCA
ATTTTTTTCTTTGCGATTCATAAATTTTCAGACTCAAGGATAGTTGGCCT
AACAGAAAATGTATAACATGTCAATGTTTTATCACGCAGAAATTTATGTT
TTGTACAACATCAAAATTCACTATGGTCAGAGCCCTTAAATTAATATAAA
ACCGCTTTCCCCTAGAAAATAAACAATGCAAACATGTGCTGATAAAAGGA
ATGTTATTTTCGAAGTAAGCCTAAGCCATGGCGTCCTCCAGCTTTTTGGT
CCCCCCTAATATGAGCTAAAGTCCCCCATCTGGCCTCCCCCCCCACCTGT
CTTTAAAATTCGTGCTCCCCCCAATTGGGAAATCCCCCTAACCGTATTGT
ATAAGGGTTGCGAAGTGATGATCCAGACTCGCCTCAATTTGCAAGCTACT
ACAGCAAAAAAAAGACTCTCAAAATCCCTAGAAAGACAAGCTCATAAGCC
TGAATGCCCAAACACACCAGGAAGGTCTGTATTTATCCTATTANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCTATTCGCCTTTCTCCCCCCATCAAG
CTTGAAATTTTCACTTCCCCCCTGGCACCAAAATCTGATTCCCCCCCCCC
ATCTTCCTGGGGGGATGATCCCATGTAAGCACTTTTTTGTTCCTACTTTG
GAAATAAAAAGACTGAAACATTGCATAATAACAATTTATTCTTGATGGTT
AAAAATTTCTTTTTCTTTTTTTTCAGAGCTCGGTGATTCCTGGTCCGCCG
TTTTTGTTCGGTGCTTGTTTAGTATTTCTGTCCTTATTGACTGCTTTATT
CTTACCTGAAACCAAACCTCATCCACGACCGCTCAAACGCGAGTCCTCAT
TATCAAGCGTTATCCATGACGGAACGACCGAACGGACGGTATCGTGTAGT
TCTTATGATAGCGAGTTTGAAATCAATGATCAAACTGGACTTCTACGTGA
TGAGGTCTTATAGTATCATTTTTGTGCATGCTTTATGGCGATAATGGAGT
TGTATGAAATTTCAAATTGTATTATTTCTTCGGTTCTATGATGAATCATT
GGTTAGATCTCCGTTCGCTGGTTTTGAGAAATTGCATCCATGGTATAGAT
CAGTGGGCAGAATGAAAAATGATAATCCTTCGTTGGAAGTTTCAGTCACA
ATCGAACGAGTATTGATGGATGGAGTTTTTCGATGGAATTGTTTGGTTGA
TGTCTTGCTGCCATAGAAACATAATTTAGTTCTGTTGATTATTTTGAAGC
AGCTACATGAAAAATCCTGCTCGCTCTTTAAAAGGAAATATCCTAAATTA
CTTCATATTTAATGCAAGTGTAGCCTAGAAATCTAAGCTAGTTTGATAGG
TGAAGTGAGTGTTTACTAGGATAAATCTGATGGTAAGTTGTGACTGAATA
ACAGTATTCCAAGGCAAACTTAAAATCCGTAAAAATCCGTAAAAATCTTT
AAAGCCCCGAAAACGCTATATTGCCTTTAGCCGTGTGTCCTAGCCTTGTG
AATACGGGCTTAGTTAACTAGGCTAATGCGAGTGCAGCGAGTTTGATATA
TTATTTGGTCTAGATTTTTAGGTAGTTAAAAAGCTGTCAATTTAATATAC
AAATCATCACAAGCTTTTTCAAAGGAAACACACTGACAATTTTATTAGTG
AGTTTATGCATTTGTACTTTTGAGGACCCGCAATTCTGACCCGCAAAATC
GAGGACGGTAAAAGTGCTGATTTACCGTCGTCCTCAGCTGGTTAGGATCT
AGTCAAATTAGAACCTTACCGTCTCCGTCGCTGAAAAACACACATACATA
TACTCGATATTGAAAATAGGAAAAGCAAACATATTCTTTCGAGACGTTGA
CAATCTGTTTCTTTCGCCAATCATTGGGCTATTTCATTAAAAAACCATAC
AGGGGGTGGACGAACTTTTTCAAGTCAAAAAAGCTTATTGAAAATCTGTG
AATACCCTACTTGAAAATGGCGAAATTTGCAAAAGTACCCTTAGAAAGAT
TCTTTTCATACCTTAAAGTGAGGGTGGACGAACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00048753TCONS_00048753Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00048753-proteinTCONS_00048753-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_146supercontigscaffold_146:306343..310476 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.08	3.99	3.42	3.04	11.54	7.87	9.9	11.27	5.55	8.36	6.34	5	5.98	6.42	3.32	4.42	5.22	4.53	2.92	4.06	3.61	4.6	5.81	5.88	8.15	9.48	3.96	3.93	6.27	6.53