XLOC_031208 (gene) - C. hemisphaerica

Overview
NameXLOC_031208
Unique NameXLOC_031208
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_152:11521..21756+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031208 ID=XLOC_031208|Name=XLOC_031208|organism=Clytia hemisphaerica|type=gene|length=10236bp|location=Sequence derived from alignment at scaffold_152:11521..21756+ (Clytia hemisphaerica)
AATTAATTCCCGTAAAATCTTAAAATCTTACTGAAAAGCTCAACCGCGAA ATTTAATCCCTGTGAAAATTAATTCCATTAAAGTAAACCTTTGAAACTGT ACTGATACCTACCAGCTGAGCCCTTGTTTTGTATAGTAGTGGCTTTTAAA GCATCTTCACTTTCTTGTTTTTAGACATACTATTTAATAATTCAGAACCA AATATGATCAGTAAGAAACATTGGGGAGAGTTAGAAGATAGTGAGGAATT TGTTGAAAAGAAGGATGCAAAACCAGATAAGATGCGCTCTACAAGTTTCC ATAATTTTGAACTTCCACCACTCTATCAACCTGTCTGTCATCAGAAATCA AATAAGAAAGAGTAAGTTGAAGTACTTCTTGGTTGTTTCTATACATATTT TTGGATTATTTTTTAATTCCCAAACTCTTCTGTCAAGGTCAAGTTTGAAT TTCAATGCTAAAGGTTTACTACCATTACTGTAACCATTACAAAATGATTA AAAAATAATAATTTTTTCTGAATTCTTTTCAAAGCAAAGAGGTAATAGGA AATCTTGTCGACGAATCTTTTTTTACAAGCAGAATATGTACAATGAGAGC AATTGTTATTAAAAAAAGAATGAATTTGTAAAATAAAATGAAAATTGACC TTGGAAATGATTTATATATCTATCTATTTTCAGAAGTTTAAAGGATATTC TTTTTCATGATATAGATAGGAGGCGCTGACAAAAAAGATAAACAAAGAAA TATGTGTTGTGCTTGTGTTTATTATTGTTTAGATATTCTTGCCTTTGTTT AAAAAAACTGTGCCATTAAATGATGTATTTCCTATGATTGTTTACTTGTA GGTCCCTAAAACGAAGTTGGATGAAAGGGCCTCTGGACAGTAAAGGTCAA AGCTACCTCTTACATGCGATCGAACTTCAACATTACAAACGACGCATGAA ATACATGTTGGCTGCTGCCCAATCACATCAAGCTGAAGTTCAGGTACAAA CAAACATTCCCCTATATTCATTAAAATCCctttagtaaaaaaaattcatg tctTACACcaagaaaaatgttattttgtAGATTAAAAATTTTTCGTTCTT TGATTATGACACTCActaaaattttttgagaaagtgGCGTGTTGTTGATT TTATTTCTATGTTGATAAACAAACGGTTACACAACTGGTGCTACTGTGTC TTAATGCTAAAGcaagttttaaaattgatcCAAAAGTTTAATTAGAGCCA AGATGTGagtaaaaataaatagaaaaggATCACTTAGCAGAAATTTGGAC GCTGAGAGCTTCAAAACATCCCACTTTTGTTTCCCTGCCTCATTCATGAA GCGTTTGAAAAAATTAGGCATTGTGGGTACTTATTTTTCAAACTGAATAT ATTTTTGCCGTCTTACAAAGAAAACGGAATAGGAAATCACCTGTGTATTC CGATCGGAATAATAACTAATACTTGCTTAGCCCTAGCGATGATCGGTTCT AGAAACCCGTTTGGGATTGTTTTACCGAAAACATAGAAGAATCGGATTTA AACTTTGAAGTCTTGACGACGATCAGTCGAAAAAAATTGTGGAAGGGATC TAaagggtcaccggggctgaccaaAAATGACAATGACAATTCAAAATAGA TTTCAAAATAGTAAATGTTTGATTGatgaattaaaaaattatcgattgaa aagtatataatagataaaagttaaatcaaaactacacgtttttttttttt aagaaacacacttttaagaaacatgaggcttagaatgcctaaaaactaag aaacatctaagaaacatgctgaggctgaNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNagaaacatttaaggctcaaaaggctgatttcttaagaaac attgaggctgcttggtaaaactagtttcttaaaaaaaaaaaacgtgtata ttcaTCAAGAAAATTGTATATAATACAGCTTCTTAACGTATCATAAAGTG CTTTTTATTATATGTGGATGTAGGAAAACAAAAAGTATCtaaatgaaata taaaaaaattacaaaacaaaataatcaaaTCCATAAATCATAGCTTTATG TAGGAGAACCTCACCACCCTGTTAATTCGAAAAATAGACCCAAAATGTTT TATAACAATCCTCCAacaattgtaaaaaaaaattgaattgaaaaataaaa aaattacaaaacaaatTAATCAAATCCTTAAATCATAGTTTTAATTGTAC CCCCACCACCCTGTAAATTCGAAAATTAGACCCAATTTTTTAGCAGTTCT CCAAAAATTGTAAATAGCTCCTAAATGTATTATAAGTGCTTATAATATAT TGTAAGGGGCTTTTTATTATACATGAATGTAGGAAAACAAAAGGTATCta aatgaaatataaaaaatctacaaaacaaATTAATCAAATCCTTAAATCAT AGCTTTATGTATGAGGACCCCATCACCCTGTAAATTCGAAAATAGACCCA ATTTTTAACAATTCATTCAAATTCTCAATTTAAACgataaaaaaaacgaa aagtaTATCTATCTCAATGAAGGAGGTAACTTTTTAATCGACATTGGAAC TACTATATTTTTTCCGTCAACTATATCAATCAATCGACTACAAAAGATTC TAAATTTACAAACGGTACGGTAAATAAATTGACCGTGCATCTCATAATAG TGTTCAATGCAGTGTATGGtagcttttgatatttttcatctGCTGCTGGA GGTAGTATAGTAATGACATTATGCCACTCGAAACCATACACAGAGTAATA TGGGACAATCAAGACTGTCCTAGTACCTCTACGTATTAAAGAATGGTAGG CTTTCTCTCCTTTCTTTGACAGTAGAGAAGGTTCAAGGAGTGAGCTGACA CAACTTTCCACTTTATTTCTAACCATTTCCATTAATCTTGTGTCATTGTA AGGCGGAACAATCAAAAGAATTCCTCCTTTTGTGTTCTTCTGTGCCTTTA TTAGAGCGTCCTTTAAGTCCGTGCAATGTTGAGGACCATTACCGCAAGGG GAGTTCGCCAACACTTTTGGTTTGCCGAATATCTTCTCATATTCATCTGT TATTTCTTTAATACCCGCCTCAGTAATACTTTTACAGTTTCTCAGATTGT AATCTAAATGAAACGTTTGAAATGAAGATGAATCATTTTTTTGGTTGTGT TTGTCCAAATCAGGGGCAAGCCAAACccattttttattatttgattCACT AATAATGTCATTGGGATTGCCTTTGAATTCATCACAAAAAATAGCTGTCA TTTGATTGCTCGTTGTCATCAAATCGTCTTTGTTAACCTAAAGcataaaa aaagggttttgtGGTTTAAGTTTGACACATTAGTACACACCTACATTAAA AGACATTATCTTTTAAAAACAACATTAAAAGTCTAAACCACTATAAGAGT CCTTAACATCAGACAAAATTCATATTTCAGACAAGCGCCACATATCATTA TTTGTAAAACCTGTGAGTTTCTATCATACTCAACGAGggagaaatttgaa gaaaaattaaattccttaCATCTTTGTTCACAAATTCCACTGAGATTCCC TTTAGACCTTTCTTCTCTGAACGGTATTTTAAATGTTGATGAAATAAGAA ATGCGTCTCGTCTTGAATTTCGTCCAACTTTTGCTCTGGTGCCATAACCA AGTATTTGACCTCTATATTCTCTTTGTGTTGCTTCTTCAACTGTTTGGCT TTTTCTTGAAGCAAGAGACTTTTTCCTGTACCGTGGTGTCCAGAAATGAG GAGGTTCTGGTACTGAGATTCCATGCAAAATAGATCCAATTGTTGTTTAG AGTAAAAGATGATATTGCTTTCGTTGGAGACTGCTTCTATTGCGTCGCGA ATGTAATCAACCCAGTTCGCAGGGGTGATAGGGCGTGATTTTGTATTGTG AATGGTGTAGATGAAAATTTGAACTATCTTTTTTAACGagtcctaaaaaa taaaaacatttttttcatttttccattcTCCTTGTCAGTTAGAcaggaca gacagacagacagacagacagacagacagacagacagacagacagacaga cagacagacagacagacagacagacagacagacagacagacagacagacc tTCGAATCTGTAGCTGATCCGTTCATAGATGTGACATTTCCATTCTCGAG CACCCCCTGTAGCCATGATCTTATATTGGTTGAAGTATTGATGACATTAA CGTGTTCTTCGTGAAGGTTGAAAGGATCCTTTTTAGAGTGATATCCAAAA GCTGGAATGAATTTCCAGCCGTCTAAAATATCTCCAAACAAAGTGGTTCT GTATGATTTCCTTTCTAGTCTTTATCTAATTCACGACACATTTCTTAGCA TCTAAGATATTTTGCTCCGTTGCGCTTCGCTTTAGCTCCACTGCTACGAG TTGTTTACACGGNAAGATATTTTGCTCCGTTGTGCTTCGCTTAAGCTCCA CTGCTACGAGTTGTTTACATGAGTGTGCGAAGATGAGCAAATCAAATTCT GCTCCTCCAAACCCTTTCGCTTTGATATCAACTGAACGAAGGACAACGCA ATCTTTTAATAAATCTCTGTTGTCTTTGAGCGCATTGAAAAACCAGTGCT CAATTTCCTCATCGTCACGTACGTTTTTCACTTTATCTAGCCATTCTATG ACATTGGCTGGTCCagtcactgaaatttcattttgaaactctTGTTTAAT GTTTTCTATCCAGGTTTCTAATTGGTTTTGGTTAATGCCATCTGAATGTT CTTCAAGAAATTTTTGTAGCTCATCTCTGAACCATTGTGGCATTTCTTCA TTTTCGGCAGTTTCTTTAATGTGATTTACAAAATCATAATCCAATGAGGT TATCAATTTTCCTTGTGGtatttcaaattcaaagaaGTATTGTATAGTCT CTTGAATACTCTTTTTCTCAATTTCCTCATCAAGAAGTTCATTCAATCTT TCCAAATTGTCCATTGTTTCTAAGATTCTTTTCAAGCTGTTTGATAAATC CTTATTGGAAAATCTTTCGAAGCAAATTCGTACAAATGATTCTGTGCTGT GGTGTCTCATAGTAAATGGTATCTGAcgcaaatctttgttttcgagCTCT TCATGTAAAagatatttgattttaactCGCAACATCCAATCCTCAAAATC ATGATTGTTTATAGCATTCGGTATCGAATCATTATTGTTCGAAAGCTTCT GTTTTCTTTTCTGTTCTTGAAAAAACGCTTTAAGTTCCTTCTTAAACCAA TGGTTGTCCGTTAGTTGATCATATTGTGTCTCTATTTCGGACAGCATTTC CTTATCTTGAATATGGTCAGCAACATGATGCTTTGACACAAAAACAGGTG GTATGAAAATCGATTCACCTTCTTTCTGGAAAAGAAATGAATCTCCGTAT TCTCTCTGCAAAAGATGTGCTGCGGCTTCTAAAGGCTTTCTATTGCGCTG CCCATTTCCAAGTTGAAACTGTCTTTTCTGATTTGTTGTCGGCCCATTTT GTTCTTCAAATATTTCTCCAATGACTTTTGACATCTTGCTTTATCGATCA TTTTTTCTTGTAAGGTTTCTCTTAATTTTTGGACGAGTTCCTGTCTCCTG TCACCATTGCTTTGCTCCTCACTCATCTCTTTAGATTAGTAATGAGTTTG CCTCCTTCACAAAACGTTTCATGATGGTCTGAGTAATAAATAATTCTTAG AAAACGGTTAGACGTTTCTCTTATTTGAAAATTCTGTTAACCTTTacgaa acttttttttatacaGCTCCCCTTTCTTTTAAACCTTTTAGTACAGTTTC CAAGTGCtgtaattgtttttttgtttttttttgcttgtgtaTTGACTGCT GTGTAACAGAATACATAGTTcatcttttataagaactttttctTTCAGAT GATGCTCGTGATCCTTATTTTTTGACTCGACCCTAAGAATATTCTGTAAT GATTCTTAAATATTCAAGATTGACTCTCCTTCGAAATTTATTCTACTCCC CATTTACTTTAGAActtatttgatttaaaattaggaagaaattaaattct tatttaaaaaatgaaatttgtatAAAGATAACGATCTGTTGACCAACACT TAATTTCCTACAAAATATTATACGATTTTTGCGCTCGCCTTGCAATTGAG AGATTAATGGGGCTTTTTCTTGTATATCTTATTCTTTatactttatttat aagaacgaactatataagagcattaagactttgatggccaaaatattaag aacattttaacttAGCCTTTGCAgattctaaaacacccaatcTCCTAAAA GATTGCACAAAATTTGGTTAAAAACTCataaagttaagagcatccgaagg cttccGAAACTTTGGGCGTTCTTGTTACAAAAGCACGTACATTGACTCTT GACCTCGAAAAATCAAAGGGATATTTTTGCAAGTTTGATTGGAATTTTTT ACATTGCATAATTTACTATTGCTGTTGAAACTCTCTGGTGAAAAATCTTT TAAGATAATCTTTGTAattgaatctttctttaattcgaaggGATAATTAT TTGTCCGTTgcagatcgaattagagagagtcaaatGTAGTATTATACTTG TTTTTTCTCAGAGGGGGAATGTTCCAGAAGTTCAAATGTTACCAACACCT CCACAAGCACCAAAACGATTCTGTTCAAACGAAGGGAAATTGGTCTCCCA AACAAAACCCTCCTTTCTAGGTACAGTATACTATGTGTAATTTTCGAACA TTAATTTGTTTAACTTTTCGACCATAGTGGGCAAAGTGTCATCTCCACTT ACATAGGTTTATCTCAGTACATCAAATTGCATTTACATCAAATTGCTCAT CAACCCAAACCCCAATCTGAATCCAGGGGGAGTTTCCACTATGATGGTTA TAATCACCTAAACTCTTTCAAGGAAAtaagtttgttttttatctttagcC CAGTTTTCTCCAGTATTAATTAAAAAAGGGGCCTTCCTGACCAACGTTAA GAATTTCTGTTCCGGTCAGAGACGAGGCCTTAAATAATATTTTGGTGTAG TGTATACAATGTATTTTGTAAGCAAACTTTAGGTTGTATTCTGCACATGA GTAGAAGTATGTATAGTTTATGTCTTCAAAACCACTGATTTTATCACGTC TCTAGGTGTAGAGTATTCAGCCAGTAGCAGTAAGAAACGTAGCAACGAAT ACAAACATTTTCACAACCCATTGGTGTTAGATGCTCTTGCTGTTCGCCAG TTGATGATGAAAGCAGTGGCTGCCATCTGCTCACATACTGGATTCGAAAG TAAGgcttgtacacgttttttcataagaataaactatataagagNCGACC CTAAGAATATTCTGTAATGATTCTTAAATATTCAAGATTGACTCTCCTTC GAAATTTATTCTACTCCCCATTTACTTTAGAActtatttgatttaaaatt aggaagaaattaaattcttatttaaaaaatgaaatttgtatAAAGATAAC GATCTGTTGACCAACACTTAATTTCCTACAAAATATTATACGATTTTTGC GCTCGCCTTGCAATTGAGAGATTAATGGGGCTTTTTNCATCTTAAACCAT TATCTAGACAGgatcattttaatgacgacacTCTAGTCTGGAGACTTACT TATTCCACAAAAATCTTGTCAATAGATAAACGTTTTCCCTTCACAGCTGC CAATGAGACAACCTTGCAAACACTGACGGACATCGCCATTGAATATTGTT GCAAGTTTTGTTGCAAGTTAAAAACATACTATGATCACCAGCCGAAAGGA GAAACCTCCATCGTAAGTGATGCTCTGGAAACCTACGATTCTGACGGATA GAAGCTCATTTCTGAGTATTTTCCAAAGTTCAGTGTCGATATTATATGAT TGCCAATTCAGCGTCGCAGCTTTCCCGTCTGTACAGACTTTGAGTGTTCA AGGGTTTGAAGGGATTAAAAGGCTTTCCGTTCAGCAGTCTAGTAtatata ctagacgtcacctgcgtttttttctacgcaatttgcgtatcaaaacactt gaaagtcttctatttttcagaaatcgtcaaagtggaactcactaagaaac gggatGAAAAATTCTGGTTTTTGGTGAGCACCGTTATCCATCCAGCAGTG AGACAAAAAACTGACCCGTTTTTAGTTCGAGTTTGATTCATCTTATTTTC AAAGTCAAGTAGTGAATCGATAATATTTTGTAGTTGGTTTAAAGGCTACt tctatttgtattcttattTCGGAGATGATCATTTCTCGAAAAAGGAATAA TATTGTCACGTTTTTGTTTCACAGGATGGATTTGTTCACGTGTTACAACA AGTCAGTTGTGAGGGTTTGGATTCACTGCAAGATTACTGGATCACTCGTA TCAAAAATGTTGCCTTGAAACTGGAAAAAGAAGATAAACAACTTCTTGAT GATTACAATGCACTTAAGGTATTTATATTTGTATATTACACTTTCTTCTT GTTGAGTTGAACTCTCATTCATCAGAAGAGTGCTTGATCGATCGGAATCG GAAGCATATATATGCTATTGTCGAATGAAATTAAtgtgttttatttcaaa actaacAGTTTCACACCGTGGAGACGatcatcagttgaaaataaaattta aaaaaactagaatAGGCGTTCATTCAACTTCATTCGACAATAGTATATAT TACACTTTGATAATACGAATCGCACACGCCTGATAAACTAGAAGTATTTG GAAGCACGAGAGGATGCCAGTAGCGTAACACCCTTCACGCATGACATACC ttgttttcattgtttttttttacaaaattaaacACTACACTGCTGAGGTG ATAGGATATTGCTGAAACGACATTCAATAAAATATACAGGAGTTATACTT ATACAGAAGTTACATACTTGGCACGTTTTAACTTGGCAGCtaagtaaata aggaactcgataaggaactttgaggctgaaactcTCTggaaaaaataagg aactccaggctcaaattaaggttccttataaaaaaacgcgtagCACACAT CGTCgttaaaaatcaagttttgctTGTGTTTCTGGTGTTTGTGTTAAGTA GCCATTATTCTGAAATACAAAGTCCAATGGAAATTTACAATTCGATCTGC TTTACTCTATACAGGATTCCACGAGTCAGCAAGTGACAATCAAAGAAGAA AAACCGTAACACCACTGAGCTGATGCGTGGAGAAGGAAAAAGGTGGCAGA ATAACGTGTTGCAAAGACCATATACCTGCATTAGTATAACTTTTTGTCAT CCCCGTACAACATTTGAACATGAAACATGAATactaacaatccaaaagtt cacGAATAAATGCGAACATTTTGAGATATGAACCAAGCTAGCTGCTCATG AAAACTGTTCAACAAAACTCTCCCGAATTTGGTTCCAGCTTCGTTTTTTA AACTCCAAATTGGCTCTACCGTAGCACTATCCGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049103TCONS_00049103Clytia hemisphaericatranscript
TCONS_00049104TCONS_00049104Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049104-proteinTCONS_00049104-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_152supercontigscaffold_152:11521..21756 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SUPT7LSTAGA complex 65 subunit gamma isoform a Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.23 16.49 9.39 6.36 13.37 10.25 11.79 13.92 8.91 9.33 9.45 7.77 7.96 8.51 6.71 8.39 13.42 9.86 8.22 5.56 6.38 8.36 16.74 15.19 9.46 11.21 6.11 4.43 8.17 9.54