XLOC_031681 (gene) - C. hemisphaerica

Overview
NameXLOC_031681
Unique NameXLOC_031681
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:51096..54792-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031681 ID=XLOC_031681|Name=XLOC_031681|organism=Clytia hemisphaerica|type=gene|length=3697bp|location=Sequence derived from alignment at scaffold_167:51096..54792- (Clytia hemisphaerica)
ATGAAAAAACATTACTAGTATTGACCCTTCGTGCTTTTGAACCCATTTTC
TCTGATATAAAATTAAGATTGCTATGAAGAGGAGAGGATGTGGAGTTTTA
TCATTCATTTTGTCAGTGGCAACATTGTAAGCTACTTGATGCAACCCCGC
CTATGTTCATTAGCGAAAAATTCTACCCGCAAAAATTTGTACACCTAACA
TAACTTAAAGGAAGAAATTTTGGCGGGAATTTAATTTGGCGGTCAACTTG
AAAATTTAAATTTGGCGGGATTTTAATTTGGCGGGCGAAGGACATTTTTG
TTAAAAAAAAAAGCCATTTAAAAAGGAAATATCTGTTTTAAAGCCTGAAA
TAACACAAATTTTGGGGGATAAATAGAGCAACTTAAATTTGGCGGGAATT
TAATTTGGCGGATGACGAAAAAAACTAAATTTGGCGGGAACTTAATTTGG
CGGATTTTGACCAAATCCGCCAAATTTTCTTCCCGCCAAAATTTCTTCTT
TTAAGGTAGTCATTTAAACACTATACCCACCTTTTGATAAGAATCACAAG
GTTTGAATTTACAAACTTTTGTTAAAAGGAACAAATATTCTTGAATGACC
CCGAAGTTAAGTAAAATAGGCGTTTCGCTTTAAGAAATTTTTATTTCAAG
ACACGGCTCTGATAATTACCAAATGTGTTTTTGTCAAACTACTCGATGTC
TTACATCATTTTTCTGTCAGGAGGACATGGCAAGGAACACTTTAGAAGTA
AGTTCCTCTTTTCAAAGTTCTTTAAAATTCAATTAAAATTTAAAAAATTC
AGGGATAAACTCAATCCTCAGGACAGTCGACTCTTATCATCCATAGGGAA
AGGGTACGTTTCGAAAGAATTAATCTAATCTAATTCTTCACTTTTTACCG
ACAAATGTTTTTGAAAACGAATTTTTAGCGAATTCTTAACCAGAGTAACG
TCAATTTTTTGGAGTAATTAAGGCTGGAAGACACCGATAAAATAAGCAAT
CGTTGGGTGGAAAATAGCGACCAGTGCGAGCAGTCTGGAAAGAAACGGCG
CGTGCACAATCACGTGACTTATACATGATTTCTGGGTTGCGTACTGTACA
TAGTTTTGATATTCGTTCTATACGTATATTCAGTAGCGGAAAGACGTAAA
AAGTTTTTTATCTAAAATCTAAAATCTTAAATGTTTCTACGTTTTTACTG
ATATTTATGATATAGAGTAGACTGGAGTCGTTTATAATGCATGTAATACT
AATAATAAACACAAATAATGATACGGGATTTAGTTTGTATAAACGACTGG
AAGAATCCGGTGTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTTT
GGAGTTAGTGCACAAAGGTTTCTAGACGACTAAAATTTACTTTTTTGCTT
TATTTCTAATATGTCTGAATTAGTCGTCTAGCTTGCTAGACTAGATATAG
AGGTATTAAGACTAAGGAAGATTTCACATGGCGCCCGATGAAGGACAAGA
AAACCAAACAAACACTGATCATTACCGAAGAATNCATGGCGCCCGATGAA
GGACAAGAAAACGAAACAAACACTGATCATTGACGACGAACCAATGACAA
AAGCCAGCTATCAAAAATTGAAAACATTGTTTAATTTGTTGGAAGATCAG
ATAGCACTTTTACGACCACGCAGGTGATTTGGAAATTCAATTTTACAACA
CCAAAAGAAGTATGCGATAATTTTAAGAACGGACAGTATTTTCACGAAAT
CAGAGAAAGTAACGAAAAAGGTTTTTCATCACGGAATTGAATAAACGCTG
GCACATTTAGGAACTGAATATTGGATCGATGGAATAAGATATATACACTA
CACAATATATTGTTAGCCAATATTGTTTACAAAAAGAAAATTCCTTTTTA
TAATAAAATACCTGCTTTTTACTTAGTACATTACGGTCCGCAAACCATAT
TGTCAGATATTGTTCATCAATATATTGTGTAGTGTATGCAGCCCTTAAGA
CTTTTAAATCGAAAGAACAACAATATTTCACTTTCTCTCCCCTGGTGGGG
TGGCATGTACGAGCGTCTTGAGCGCAGTTCAAAAATGTCCTTAAGGAAAA
CCTTGGGTGAATCTCTAGTGACACTTGAAGAACTACAAGCAATGTCAGAT
CGAAGCATTATTAATAGTATACCACTTTGTTATACGTCAAAGAAGATGAC
ATTGATGAGCCTTTTTCAAAAAAAGAAATTGAAAAAAAAAAAACATTCTC
TAAGGTAAAAATAGATTCGAGAAAATATACCTGCATGAATTGAGACAAAA
TAACATTCACAGAAAGAATAAGGAGAGTGATGTAACGTAAGTTTAAATCA
AATTGTCAACAATTTACACAATGTAAATTTAATTCAATCATTGATTAACT
GTTGATGCTCTGGGTATTGATAACTATTTTGATAGATTTGGAATGGAAAT
TCATGCCGGAATCTGTGATCTCCCTGAAAAAGCTTCTAAAACAGAAATCC
TATTCGTCGCCTGCCGTACGCACCCAGCTTCTGAAACCGACCACGTAAAG
GTGAACGTGAATGATGAAAGATTCTTCCTCGTTGTCGATAGCTTCAGTTA
CCTTCTACCTTGGTTCAATCATAACGAACAACTGCTCAGATCGTGAAGAT
GTGCTTTCTCGAATTAAGAAAACAGGAAATATGTTTGGCTCCTTGAAAAA
GTGTTCATTTGGAAATCAAAAAGTAACTTTTAAAGTAAAAGGAAAAGTTT
ACGAATCACTCGTCTTGTCAATATTATTGTATGGTTCTGAATCGTGGTGC
TTGACGGAAGAGCTATTTCGCTGACTGCGTAGTTTTCATAACCGATGCGT
TAGAGTTATGTGTAATGTTAATATGGCTGATGTTTTTGAAAATCGTATTA
CTACTGAGAGTTTGTAGGCTGCATGCATCCCCAAATTAGTTTTTCACCCT
ATTGACTTTAATCTTGACCAAAATAATGAACCAGGACCTTCTTCAAGCAA
TGCCATTCTTCCTACACCTACCGGGTGCGGCAGAAAAAACTTTGGACGTT
TGGCGAGCCACTGAGGCCGAACAAAGTCTTGTTTAGACTCAAAACCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050012TCONS_00050012Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:51096..54792 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.28	1.58	1.18	1.23	0.61	0.37	1.36	1.41	0.82	0.85	0.91	0.53	0.33	0.2	0.44	0.42	0.57	0.42	0.52	0.23	0.59	0.65	0.43	0.46	2.32	2.68	0.62	0.55	0.79	0.82