XLOC_031621 (gene) - C. hemisphaerica

Overview
NameXLOC_031621
Unique NameXLOC_031621
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:95789..99313+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031621 ID=XLOC_031621|Name=XLOC_031621|organism=Clytia hemisphaerica|type=gene|length=3525bp|location=Sequence derived from alignment at scaffold_167:95789..99313+ (Clytia hemisphaerica)
tgaaaagaagaataaagaaattttgaaaaaagagaagatgaaaaaataga
GTAGAAAGGGTTCATGGAAGGAGAGAGATAAATACTACAGGAATAACAAC
AAACTCACAACACAAAATTATATATATTGAGAGGGAAGGAGAGAAATCAC
TTCTAAACTTGTATTACCTATCAACATTTATTACATACATTTTGCATATG
CTACCTTTCGAAGAATTTTGTTTTTGCACTACTTTAGTTGAAAATGGTAC
AGTATTTTATATTTCTAGttatgtttttaatattttcataattaCAATCG
TTTTACTTTTTACAATTCGCAATTGCAGTCTTGGATAGATTATCTACTAT
TGtaattgtttttctaaaaaaaattgcctaaaaCCCTAAATTACAGCAAG
GAGTTTTCACATTCGGTTTTCTCACATAACGGTAAAACGCACTTTAAGGA
CTTAAAAACAAGCTACATTTATCTAGAAGTCTGAAAAGAAAACTGTAACT
TTATATATATTTCTTCTTGTTAACAGAACTTTGCCACGGTTGATAATCGA
GTTGACCACGCTAATCCATTCACAAATCAAATCTTCCAAGAAGCTGTTAT
ACGGAATGATAAAGCTATCGTAAAACTTCTTCTCAAATACGGTATCTATC
CAAAGAGAAACGAACGTAATCGTCAAGGTTTGACTGCACTTCAGCAATGT
GTTCTCGATGGAAACGGTCGAATGGCAATATTATTACTAGAAGCTGGAGC
GGACATCGAGGCAAAAACATCAAACGGTTGGACTTGTTTACACATCGCTT
CTGCATTAGGTGATCTTGACATGTTAGCCACCTTAGTAAACCATTGTTGT
GATTTAGTAGCCTTGACTAAGAATGAGGAACTACCTATTGATCTTGCAGC
ATCTCGTGATATCAAAATCAAACTTGCTAAGGAAATGTCACGTATCGGTT
ACAGTGAGTTAGCGCAATGGTATATGCGTAAACTAGCAGCCCGTGAAGGC
GTTTTCTACGTACTTTCAGCTGATACTCTGTTGGATTTAGCCTGTGAAGA
CAAACAAGAAGGAAGCCTGGGGAGTGAATTTGCACGTCAATACAATCAAC
AACGTGAAATGTACATCCACTCTCCAATTCGTAAACAAGACTCACAAGCT
TTCCGTATTGATGCTTCACCGAAAAAGGATTTATGGCTTGAAAACCCTGC
CCAAGAACAAACGAAATATCTCACATACTCGAGTGGTTATTTATCAGAAG
TCGTTTTCGACCCAGCGTCAGGACAATATTTAAAAGCACTTTCGTCAAAC
CCTCCATTGTTAGATTCACCGCAACGTAAAACTGTGATTGAAGAGAAAAT
TCAACTAGCTTCAATCAGTGAGGTAGACGGTCCACCAATCAGCATGGAGG
AATCTAAATCACGTAGTGGTACTTTAAAACGAACATCTAGCAACAAACGA
CACAGTCAGAATCTACGTAAACAAAGCACAATTGAGCTACATATTGATTA
TTCACATACAacagaaagtgaaagtgatgaCGACTGCGCTTTTGTAGCCG
ACCAATATGACGGATACCTTACTCAACCGTCAGATGTAACCAACTCCTTA
CCTAATCGCCGGAAACCCAATAATGCCGATTCTCATTCACCCGGACACTT
AAAAACATATGAGAGAAGTTCATTTAAATCTTCAGATCGACCTAGCTTGG
AAAGTGTTGAGGAACATACTGGTTTGAGTAATGAGACACTTATTATTAAA
GATACTCCTATTCGATCAGCCCTTGCTTCATCCAACGAAAGCAATAATCA
GCCAGAGCTAACGGAACCGTACAGTACCACACCACCAACAGCTAATTCCA
CTCTTAGCAGTTCAGGGAGCGGTGGCAAATCCAAGAACGTTAAGTTTAAC
CCGGTCGATAAGAACAATGAATTTTGTAATTGTCCGACTTGCAAGAAACT
TGGATATGCGTTTTCACCGGATATTCAAGTAGGAAGCCGGAAACCACCGA
CGCTGCAACAAGCACCACAGCAAAGAGAACAAGCGTCACATTTAACGGGT
AAAACGCCACAGGAAATAATGCAGACAGGCGCTGGGTATAATCAATTTTA
TTACCCTGAAACCACCACTGAAAAAGGAGGACTTTATTATGATCAAAGTG
GTTATGAGTATAAGCCTCGCAAACGAAAGAAGAAGCTGTTTTCAGGCATC
AAGTCCATGTTTAAAGATAGTATCAAAGTGCGGACCAATATGGACCCATC
CCCTGCATGTGATGATGCTGGTATTCTTTTCTCAGTGTCAGTTCGTGATC
GTAACAAAGCCAAACAAATCCGACAACGACAAGAAGTGCGTCGTAGCAAC
TCCTTCTCCGGTATGGAATCATCGTACAAAGCTGCTCGAGATGAAGAGGT
CAGTGTATTATCACATTCTCAAGTTGTTGCACCACCTGCTAAATTCTCCG
ATATCTATCAAGAAAGAGGGGTGTTTGACCCTACTCAGTATGAAACCAAG
ATGGAGTCGTCGAGTCGCGTACAACAGGGAGAGTACCCTCATCAATCTTC
AAGCCAGCAGCAATATCAACAGTCACAACAACAAAACCAACAAAGGGGAC
GTGATCAAGCACCGTCTAATTATTACCAGCCACGAAACACGTACGAATCG
AGTCGCCGTGAGAAACATCAATTCACACGTGACCTTCCACCTCCATCAAT
GAACGGTGCAATAGCAGATGATATGTTGTATTACACCGAGGAAGAAATCA
ATGCTTATTTAGATGCCACGACAACTCTCCCACATGGTTTCCACTACAGT
CGCGCACCACAAACCAACAACTATCAACAACATCCTCAGAACATCTTACA
ACAACACCCTAAACAAGCTGTTCCCATCCAACAACAAATTCCTCCATTAG
CCAACAACAGTACCGGTCAACAAAAATACCACAGATCTAACAACCAAAAC
CATCATCAACAATCTCACTCAACAAAATCTCAGCACCCTCCAACATCTAA
TAACCATTCAACAAACTACCAGCAGCAATCAACGAAATCCTCAACAGTAG
TAGACCACCATCATCAACATTCTTCATCCTCGCATCGGGAACGAGCACAT
GATTCACATCATTCTCACCACCATAAAGATGAACACAACAATGACAAGAG
ATTGATGGCTGGTAAGGAATCATCTTCTTCGTCGAAAACAGCAATGGATA
ATTGTGAATATTGTAAAAGTAATGCACCTATTGCTGGTGCTATTCCTATT
CAAACTGCAGAATGAGATTCTCTTGGACTATGTAACTTTCGATGGAAATT
CTCAGTGAATGATCAACATTATTTTAATGAGATTGAAACCAGCCGGATCT
GCTGGGCATGGTGTATTATACATAGGCAAACTTAAACTattaatgtaaat
taattgCAAAATTGTAAGGATGCAAATGATGTTTTAATGAAATTCTCTAA
TTTAAATCTGTCCTGGAATAATGAAGTTGTTTATTAGTAAAATGCTATAA
TATAGTAAAATGCTATTATTTAAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049867TCONS_00049867Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049867-proteinTCONS_00049867-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:95789..99313 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04	0.01	0	0.04	10.76	9.71	17.94	19.16	4	5.77	4.37	3.29	3.62	3.45	2.59	4.51	10.46	10.02	4.61	4.5	10.12	10.15	2.45	4.29	6.42	7.57	5.85	5.28	0.1	0.09