XLOC_031686 (gene) - C. hemisphaerica

Overview
NameXLOC_031686
Unique NameXLOC_031686
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:174503..183445-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031686 ID=XLOC_031686|Name=XLOC_031686|organism=Clytia hemisphaerica|type=gene|length=8943bp|location=Sequence derived from alignment at scaffold_167:174503..183445- (Clytia hemisphaerica)
AAAACGTCGAGTTGTAGAGGGTCAACTGTACTGTAAGCTAGCAAAAGCAT GTCAAGTTTATAATGACATCTTGCCAAGTCTCATAGAATTTATTTATTAT TGTCGAACTTTCAGATAAACAAAAACAAAATAACACAAACAAAAGGTACA AGATACAAATAAAGCATTTCTTCTACGACGACCAAGCAAGTGAATAAAGC AAGGAAGTGTATAATTTGAATGGTCACTGCAACAAAAGAGATACTGTAGG AAGAAAACCTATACGAATTGATGAATAATGGTTTGGTTGAAGATTGTGTT GTTCTTGATTCTCGTTCAAACTGTTAGTAGTCATTGGTGGTAAGTTGATA TTTACTTCCGAGATGAGAGAAAGTGAAAAAGAGCACAGATTTAAGACATT TGATACACTATTTTGTCAATCATCCATAGCGACCTGGACACTCTTGAATA AGCAATTATCTGCCTCGAATTATCCGGTTCAAAATTTTAGGCTGTAATAC AGTTGTATTGACAAAAATGAATGGATTGATAGAGTCAGAAATATTTACGA ATGATATAGTTCAAAGTGAATTCGATATAATCTTTTGCCCTTGATATTAT GGAGAAAGAAGTTTTGAAATAGTAACAAGAGGTTACGCACACTCAAGCAA AGTTTAATCTTATTTCGAACAATTTTCTTATCAATATCTGTGTAAAGAGG GACACCACAGAGACACAGTGGTGTGGTATAGAAGGATCGTACAAAAGAAA CAGTTGCTTTTTGATTTCTTCTCCTCCTACCTAGTATCAAGGAAATGAAC AAATTCTCATATCAAAAATCGAAAAGATATACACTTTCTCTTTCTAGGTC TATAATACAATTAACCTAGACCACCCTAGGCCACTGGCGTATTTTTCTAT TGATTTGACTTTTATAATGGGCGGGGTTTTCAATGATTCGCGACATGCAC TTTTGAAAGTCTAGCCTGCTTGATAACGGGAATTTAAAGTTTTTGGCACG AAAAAACGGAAATCGAAAAAAGCTTTTACAAAACAGGTTTCGGCTTGCTG TACTTGAGATTTCGACATTATTCCAATTTTTGTTTTCCGTTATAATGCTC CCAGTACACTTTGTTATTGTTTTGATATCTTTCACGATGAGGTCGGAAAT AGTTTTCATTTTAACTCCTACCCTAACTTTTAAGGACTTTGTTTACCATT GGCCATGGATTTTGTAGTAGTGACATCAACAGTATGACAGATTGAGCTTA CACGGTCAGATTTAATATCAATTTTCATATTTTTCATTATACTTAAAGTT AAAGTTCTTAAAGTAAAATAAGAGATTAAGGCACGCCTTTAGATAAACCA AGAATATGTCTGATAAGGATAGTTACTGTACGACCGACCAATCTATTTCA AAAACAGTTTGTCCTCTCAGTACCTATATTCCTATTGTTTAAAATATATC AAAGCCTGACGGAAACCAAGATTTGTCGAGTACGATTTCAATCGAGTTAA AATCTTTCTCAAAAAAACTCATGATTGTGATTTGCGGTCAAAGGACTTGC GATTGTTTCGGAATGTGGAAAAATACCATAAGGTACAACCCTCTTTATTG GCACTCGTTTCAAACAACCAATTATATCAATATCTAGATTTGTGATTATT TGGTAATTTAAGGTCCGTTTTCTATAACTTGAAGACTTAAGGGGTAAACC AAATTAGTTTGTTAAAGATGTCTCTCTCTGATTCTCCAATCTACTGTATA GAATATGAGAATCTTTGTGAAGATTTAATCAAGTTCATTCTTGAATAATG TCCGTTATATCTCCTTTCATTCTAATTTTCGGGCACTTTCTCATGCAGTT GTTTTAACGTTTTTTAAACAAACAAACAAACAAACAAGCATCGATGATAA TGTAGGTTTGTAAACACATTCTGGTTTTTTTGAGAGATAGCAAAACTAAT CTTCGATACAACATCACTTATAAGCACATAGGACTGACAAAAACTAATGA TTTTGAAGTCACACATGACTTTGGGTGAACGAATAGAAGTTTCCTATAAG AGTATATCTCTACAGAACAGAGTCAGAAATACCAAAGAATCAACACATCA ATGGCCTTCAAGCTGTCGAATCCGATTTAACAGAAGTTTAACGGCTATAG TAGGATTCTTTTAAACGAGGAAATATTCAACCTAAGCCTGCTGATTAAGC CGGGAAGCTAGTGATCAAGTGATCCATTGAGCTTAAGTCAGATTAAGAGG CATGCTTCATTAATAACAATTTAATAGAAGGAGAACAAAACCATTTTATG TGACACTATGGACGAATTAAGTATTTGATATCTATTAGTTAATTGTGTAC ACTGCATGAGGTCTAAGGGAATATATTGATATGGTTATGATAGTAAATAA ATGAGACCTATTTAACAAATCTGAATCAATTTATCTGAGAGAGTGTATCA TGCATTTGTATTGAATAGATACTCGCCAATTTACGCAATGTCCTAGTCTT TGGCTATTTCGGCTATCGAATATTGACAGTGGATATAAATGATTTTTACT AACTATAAGAAATCGATATACCTTAAAGGCACTAAAAGAGAAACAAACCC AAATAGAGGTTTTACCGTTAAAAATAAGCAAGAAGTTGATAATATTTTAG AGAAAAAACAAATGATTTTTAAATATTAAGTCTAAGCTTAAAATCTTAGA TCGAGTTCTATTCTTAAAATGTTCTTAAATTTCAGTAACGAAAAAACAAA CCTTTTAATGAAATTCCAATGAACTGAGTGAATAGAGCTAAGGAGGTCGC TAGGTGAGAGGATGACAAAACCTCATGAAAAGAGAGGAAATTGAAAAACT AACAAAATGATATCATCATTTTTTTGTAATTAATACGAGACTCTGCCACA CATGTGTATAATACAGCACGCGACCACTGACCTTCAAAAAAACTTAAACT AGATCAAGTTACTCGAATCTTAGTCAAAAATAATTTCTGACAACAATTAC AAGACGAAGGGAGTTAGCTTTCAGACTGATTGTAGACTGGGAATCCAGTC GTTTATAACGTTTTTGTTGAAAGCGGGAAATTTTTATGTCGGGATATGAT TAAAATAAACGACTGGGCTAAGGTGGTTTCCGTAGCTTACGGGAGTTCCA GCAGGGCCCGCAGATTTCTGCGGGGTGAGAAAACAATCATATACAACAAA ATATATAAACAAATAAAAATTTCAGCCAATGAGAATTTCTAAGTGAAAGA AAAAAACAACAAACCAAAACAAACAAACAAGACCCCTGAAAATGTTACCC AAGAACATGAAAAAAGAGAATTTTTATGAAAAGTTTGTTGTGCACAAAAT ATTCTAGACGACTATATTGATGCTCCTGTCAAATTTCTACTTCCTATTTT TTACTGAGTTAAGTCGTCTAGCATGCTAGACTAGACTGATTGCCACTTAA TGTGGGACAATTTTTCGAAACAAAAACAATGTCTCCAAATAAAGTTTTCT AGAGAAGGAAATACATGCACGCCAGTCGTGGAGCGATATCATGCGGGAAA AGTGAGCATAGGAAGAAAATTTGTCGGTGGAAGGGGCGGAAAACTGTTAA TCAGCACCCTCCCATCAACGTTTGCACGTTCTCCTACGCAGCTCCTATTT TAACAAACGCCAGGCGCCCTTATGTTCTCGCTCTCCGACGCGATTTTTTC TAGTTATAAGGGAGAGAGAGAAATCTTTAGGGTGTGGACACTTGTAACTG TAACGAAGGATAAAAAAAATCACCCACAAAAACATACTTATATTAATGAA TGATTTCTGTAAAATACCTGTGGATAATTTGTGACCTTAAAAATAGAACA TCGAAATTACCAACCTCCCACATGAAGGCTCGCCGCAAATCTAAACTTTT TTGAAATTAGTAGTAACAAAAATTTTGTCGTACATAGAATAACGAGATAT GCTTCAGTCAAAAACTGCATCAGTAAATAGACGATATTAAAGGAATCTTG CGAGAAACTTTTTATGCTTAAAATGCTATTCTACCGCCATGACTGCCACC TCCCCCCCCCTTAGCCTCCACTTACTTTGAACTAAACTATACAAAAAAAA ACAACTTTATATTAAACTTTGAGGCTTAAAGAAGGTCCTAACGCTTTCAA AAGTTTTAATTCTTTCTTAGTCTTGGTTAAACGTAAGCATCATGTTCTTA AAGAAATGGTTCGCTAACAATCTACAAAATAGTATTCTCAATTCTTTCCA GGTTGAGCTCTCAAGTTTTCACCGTCGGATCAAATGGAGGTTGCAATAAC ATAGCTGGTTTAGTGAAAGAACAAAAATCACTATGTCGAAAATATCCAAA AATGATGGAGGTTGTTGGACAAGGAGCTAAGCTAGGTTTGCAAGAATGTC AGCACCAGTTTGCAACTTCAAAATGGAACTGTTCACATTTGGATCAACGA AAGAAAGGATTACTTGGCCTGCTCACCAGTAAAGGTACAACACATTCAGT TGTCTAGTTCGTAAACCTATGCTTCCTATAAGAACAGAACAAGTGTACAG CTACTAACAGCTACAAGTATATACTGTTAGCGGATAATGAAAAAATATTT CTTGTATTTTTTGAAAAAATATTCGTTCATTCAAAAGTTTTGAAATGATT TTGAGCCCAGCTGGCATTAGAATCTCACCTCGTCCCTGTGTATCCCAGGC TTTATTTACGTTACTGGTAGACGCCAGAGGCGTTATTAGTAACCATCAAA AAAAACTATAATACAGAGGGAACGAAGTTGTCAGAATCTTCGATTTTTAA CCTCTTTCTAAAATCTACTTTTCCAGGTAACCGTGAAGCAGCATTCTTTC AAGCGATAACGTCAGCCGGTGTAGTCTACAAAGTGACTCGAGCGTGCAAC AATAATAAATATTCTGCCATATGCACTTGTGAGAAAAGACATGGACCCAT ACCCCTACAGAACAATCAGCCACTCAAAAAAGGTGAAAAGAGACCATCTT TCAAATGGTTCTATTGCAATGATAATATCAATTTTGGAATGAAGTTTGCG GAGAACTTTTTGGACGCGCGGGAAGTTGGGAATGATGCGCGTGTCCTGAT GAATAAGCAGAACAACTTAGCTGGTAGAGCGGTAAGTAAAACTTTATCAG GATTTATTCATGATATTCATGAAATAATATTTTCAATGGAAACACCCCAG TTTTCACCAGTAGTGGAAATTTAAGCTGTAGTAAAATTGTTCAAAGTTTT TCGCCACTGATGGCAAAAACCGGGGTGTTTTCCGAAGAAAACATTCGTAA TAAATATCATGAGTTGAGCAACTCTCTTTCGCAGTCTCGAAAACTTAAAA ACTTTCTTTATTTTTCACGTTCAAATAACGTATAACTTGTAACAATAAGA AAATAATCTTGATGACCGCTAACTGTTAAAGTTTGGTACCGCTAGAAAGA TCTATTCTTTTATCATACCAACTTTTGAATCAGGGCACAAAGACTTAGAC TTAAGACTGAGTAACTATATTAAAATGTGCACAGCAACAAAAAAAGTCGT CATAATTTTGAAGTAGCGAAGAGAGAAAAACTCTTAATTCAATCAAGAAC ATTTTCTTCAGGGTAATCATGCCAAACCAAAACTTAATCAAACTTATGAA ACAGTTTTTTTTACAAATTCAATGTAGTTGCCAATATGTAATAGCCTGAA TACGCATGGCATAATTTTGCCGTAGTAATCGAAAGTCTCCTGACTATAAA GAAAAGAAACAAAGTCAAAAAAAAAATTGCTAGAATTCCAATGCAAAATA GTTTGTTTGATTATAATGAGTCATGGGTAGTTTGAGGATGACCAAAAAGG CTGGACTTCCAATCACTAGCACTTCATCATATTTAGAAAGTTTGTCCGGA GAAAAACACAGGCTGAATTATTTTACTCATCAGTTCATCATCAAATGTAA ATAGATATTTTTCTTTATAAAAAGGTCAGTGCAACAGGGAAAATAAGGCA AATCTGGAATCGCCAGGTCAATCACTAAACAGTGGGTTCGTTTGTCCCAA AAGTGAACCTGAACACAAACTTTGAAATCTACCAAGTACCCTAATTTGAG CAAACGCGACTAGTAAATGACGTCAAAACAATATCCATCTCAAGCCCATA ACGACCATAAGACGTCAGATAGACGTCAAATTAACTCTTTTTGACCGCCT AGGTACAATAGTAAAAAAAAAGGTACTGGCAAAGAAATAATACTTCAAAT AAGAGCGGCGGTACTAAGTTTTCTTTCATAATAAACATATCGGAAATAAA TTATCAGGAAAATTTGGGGTGACAACCAGCTGGCGTTAGATCGAAGCAGG AAACCCTCCCAGAAATTAAAAACAGATATAAAAAAAACAGCCAAATTGGA AGTGTATTATTTATTCCTCTGTCAGCGGAAACAGTGTAGGGTTTGTATAT TTCCCGCCATCACTCATGCAAAGGTAACGTTTGCAAAGGAAAACATTAAT ATGATAGACGACCACCTAATGACATCCTCTATCCGAATCTAATTTCCATA AATGGAAAGATAGAGAGAGGTTACTTTTATGAATACATGACTAATTAATT TTGGTTGCAACGCAAGTTTCCATAATCGAACAGGACAAGAAAACGCCCTT TTCTTATAAGCTATAGTAGAGCCTCTTTATCTCAGAGCTCTATAACTCGA CTCGAACAAGCTTTTTCGTCCCTTTTGTTAGCAATGCATTATAAACCTTA CTCCTTATGTCGAAATTTCCTTAACTCGAACAAATTCGTGTTCCCTGTGC GTGATCGATTATGCAGACTCAGCTGTATCACATATTTTCTATCAAATATT CCCTTCAGGTTAGCTTAACTTTTCCAAATTGACTATAGAAAGTGATTACA AACAACTTGAATACAAAACTAGGTGGTGGTGAATAAATTGAACATTTCTG TGCAGTTTTACTATTTTACCTTTTGCGATAACGTTTAAGCCTAACCGAGC TCTAAAAACGGATATCTCATAGATTCATTGAATGAGACAAGGAATCTTTC CCGCATTACCAGTTCAATAGATTTTAATAAAGAGGGCGATTATTACTGAC TAATCGAAAACCAAGATGCTAAAAATGGTTTAACACATTATTAAGTATCA CATTATCACATTGCAATAATGATCTTTAATTAACTATTATGCATCTTGAA TCAAGCACTTAAAATAGAACAAACAGTACCCAGTACCGTGCTGAGTCAAT CCCATATTCAAAATTCAAATTCAAACGAACCAATACCGTGCTGAGTCAAT CCCATATTCAAAATTCAAATTCAAACGAACCAATTCCGAACCAATTCCGT TATAAAAAAAAGTAATTTTCATCAATTAATTTTGTTTTCAGGTTGTTAAA TCCTTAATGACGTTTGAATGTACGTGCCACGGTGTATCTGGAGCGTGCAA CGTCAAGACATGCCGGAACTCGTTACCAAATTTTTACCGAGTTGGGGATT ACCTTCAACAACAGTATCACGGTGCGATATTCGTGACGTTGGATCAAGTC CGGAACATAATTACACCACGGAATCCGGGCGTCAAAGAACACAGTCCTAA GGATTTAGTTTATTTAGAAGAATCGCCAGACTATTGTGAGGTCAATATCA AGGAAGGTACTTTAGGCGTGGCAGGTCGCAGGTGTAACAAGACATCACCG GGTCCTGATGGTTGTTCTGTGATGTGTTGTGGTATGGGACATCATACCAA AAAGGTAATAGTTTGAATTCTTCCAGTTAAACGATATTAAACCGATTTCT TTCAGTGTAATGATAAAAAGCTAAAATTCAATTCGTGTCCATAAATTGTT TTTAAAGGTGTTTTTCTTGGTCTATGGTGTGATCCAGAGTCGACTCTCGC TCATTTAAACTTTTTACTTTTTAAATGTTTCTTTAATTCGACCTAGCGCT CAGTCACTGTCAACCAGAAATCCTCAGGAAATCTTTTTTAGATTTCAAGT CGGGTTTCAAACTAGGGAGAGTTACTGTATGTTACGAAATTACAATGTTA TCAGAGGGTAGATGAAAAAGTTTTGTAATGTAAATATATTATACTTTTTC AATTTATCAGGTTTGGGTGGAATCGAATTGCGACTGTACGTTTATCTGGT GTTGCAAAGTTCAATGTCAAAAATGTCGGTCTCTTCAACAACAACATTTC TGCCGTGCTAAGAAGAAGAGAAGAAAAAACAAAAACAAAAGACGCCGGAA GAACCGTAACGGAAACCACCAAATACAACGGGACGAACCGTCAAACCATA TCATGGATAGGAAAAAACGATCAGTAATGTTACGCGAATACCTAACCTAA AGAGGTGGCTACAAGTAGAGAAATAAGGAGACGAAAAGGAAAAAGTGGGT GTGCTCAGAGCCTTAGTGTTGGCCGGCAACGTGTAAACAATGACTTTCAT TCTTTCCGGGAATTTGGCCCCCTGATGAATTTCCCACGTAGAAAGCGGTT ACACAAAACATCCGATTGAATAAACGAGACTAAGAGAAGGAAATTTGTGG TTAACAAAGACAAAGATAATGACTTAACCAAAAAGGCATAAAAATGACAT TATAATAATGACAAAATAATCTTAAAATATTCGATGTTAATAGTTTTGAT TTGAATATTCGATGGAGACGTGAACAAATTGTAAATAATATATAGTTGTT CTGGATGATGAACTTTAGATTTACTAGATACTTGGTGAATAAAAAAACGT AAAAGATTTTAACCCTGATATTTTGTAAATAATCTAAGATGACTCATGAT AAATATTTGTTGGTATAAAATACACAAATAACCACAAGAAAATATCTTTG TTATCAGATATCTTTGTTTCATGACCCCTTCCAAATAACAGTTTAACAGG AAAAACTGGTAATATTCTCTTGAGAGACATCACTCCGAGAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050019TCONS_00050019Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
unclassified Wnt ligand X1ATCONS_00050019-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:174503..183445 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
WNT2protein Wnt-2 precursor Homo Sapiens
WNT1proto-oncogene Wnt-1 precursor Homo Sapiens
WNT4PREDICTED: protein Wnt-4 isoform X1 Homo Sapiens
WNT2Bprotein Wnt-2b isoform WNT-2B1 Homo Sapiens
WNT7Aprotein Wnt-7a precursor Homo Sapiens
WNT7BPREDICTED: protein Wnt-7b isoform X1 Homo Sapiens
WNT5BPREDICTED: protein Wnt-5b isoform X1 Homo Sapiens
WNT5Aprotein Wnt-5a isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.11 0.11 0.08 22.56 18.52 64.38 72.21 36.44 39.75 17.55 20.23 22.85 20.52 23.41 24.8 7.86 6.96 24.42 20.54 11.48 11.77 2.38 5.22 4.76 8.08 1.67 0.31 0.13 0.28