XLOC_031696 (gene) - C. hemisphaerica

Overview


Name	XLOC_031696
Unique Name	XLOC_031696
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_167:373705..379245-

gene from alignment at scaffold_167:373705..379245-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_031696 ID=XLOC_031696|Name=XLOC_031696|organism=Clytia hemisphaerica|type=gene|length=5541bp|location=Sequence derived from alignment at scaffold_167:373705..379245- (Clytia hemisphaerica)
CTTAGAATAAACTGAAAAATGATTGAAAATGATGATGGTGATGATTATAT
GTCATCTGATGACGAAGACTTTTCGTATCCTAGTGATATCTGGAAAAGTT
TTCCCCAGAAAAAAATTAAAAGTACAACTTTGAAAAGTTTGCATAACATA
GCTCTGGGAAATATTTGTAAAAATATGGGATATTGGATGGAATTTTTGCC
AACAGACCCTCATAAATTTCTTTATGTTATTAGCCCATTCGATGTTTTAA
GTAAGTATCACTTTTCCATAATGATAAATTTAGATATCATTTTTTAAACA
TTTTATATTCAAAAACTTGAGTAAACTTCTTGCTAGACTTGATTGGAGAC
TTGATTATTCATTAGATAATTTATAAATACTTCTTTTCATTAAATCTCTT
TGATAAAAGGCTCCAAAGATACCATGGCAATACTTTCAATGCTCACAGAG
ATGCACAAATTTAAGCCATGTTATTTGAACTTGATTTTCCATCAACACCT
GCTAGAGATGGACTTTGATATTTTGCCAAATGGTTGGAATTACATGAAAT
CAATGTTCAATAGATGCAAGGTAAATTTATTAGAATTATTAAACCTTTTT
TGTTTATTTTCGTAAAGCTAAGACCAGTTTTGTCTATATACACACATTTT
GTTCTATTGAGCATCTGTCAAAACTTTCAAATATCAGATTTAAAGCTTTG
TACTGTTTTTTATTGTGCCTAACATTATATTTTTTCAATTGCTATGATTT
TCATAATAAAGATAGAATCAAAAACTAAAAATCGTACCATATTTTTATTT
CAGAGAATCAAGAGGCTGAAAGTAACAAATTCAAAAATATCCAAAGAGCT
TATCAAAAGAATTCCAACATCATATCCCGGTATTGAAGAACTCAATTTGG
GAGGTCCCCATCAAGACCTTATCGATAATTTGAAAAATTGTTGTAAATTA
AAGTCACTTCATTTTACTGCCAGTTCATTATCTGTTTTGAAGATAACATT
TCCACCAGAGATACAATCCCTCACAATGAAACATTTAGCTGGTGATGCGA
ATGATTCAGACCATCTTTGGAGTATCTTAAATGAATTAAAGTCATTATCC
AGGCTATCTCTCCATGGATCTGAGTTACATTTTTCCACTCTTCCAGATGA
TATCAAATTCCCAAACGTCAAAGCGTTGGATCTCTCAAATTGCACAGGTT
TAACAAACCAAAATCTAATTTCCATATTGGAGGCTGTAATCAATATCGCT
GACCTAAATTTGAATGGACTGTCCTGTGATGATACAAAGATTTTTAATTC
TATTGAAAAACTACCAAATTTGTTGATTTTAAAAATTGCTTATTTGTTTG
TGGTTTTTGACAATAATGTCAAATTTTGCTTGAAAACAATAGGAAGTCAA
CTGGTTACTTTGGATATATCTGGGAATCTAGCTATAGACATTGATTTCAT
TAGAATGCACTGTCCAAATTTAGAAAGCCTCTTATTGTCACAATGTACTT
TTTTGAATCCTGATTTCTTTGAACAAAGAATTATCGAAGATCAATTAAGT
CAATATTCTTGTACGAAACTCAAGAAGTTTGAGCTAGATTCTGTCTCTCT
GGATATAATCACTGACAATACTAGTAATATTGAACCAATCATAGGAGATG
GTGAATTCAATTCGAGAATATTCGATACTCTTTGTCAGACAGTGTATAAA
CATTTCATGTCAAAAAGTCTTATAAAATCACTTAAAATTGGCCATGGAGC
TTTTGTTGATTATATTTTAAAACATTTTGAAGGTACTTTATTAGAATATA
TCGATTTCTCTGGATGTCGAGGCTTAAAGAAGGAACATATCGTTAAGTGT
TTATTGAAATTCCCAAATTTAAAACAAATTGATTATTTTGGTTGCAAGAT
TTTACAATCAGAAAGGAGCTACTTAAATGGACTAATCTTCAGAGCTGGTA
TTGATGTGAAGTGTGAAGGAGACTTTAAGTTTTCTTAATTAATTGTTAAA
AGATTGTAAATGAAATTTTATAAAGTTACTATATTGGCTCTCTTTTTTGA
TAACAATAATAATAAATTAAGCATAAGTATGGAACGCCATAGCTGCCATA
AGACGTCTTTTTTTATGAGCTCTTTTTTTATGAGCTCTTTTGAAGACCTC
TTTTGAAGACCTCTTTTTTGATGAGCTCTTTTGAAGACCTCTTNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTAATAAT
GGAACAGTAAAATTTCTATCCACATAGGGGGCCCCCACATAGCGATTTTA
CTAGAAATTCTTATCCCTGCGGTGGGAAAAATTTGCACCTGGGCTGTGAG
ACAATATTGTTTTCTTTAAGAAAATGTTTGATGACTTGTCAATTCCCCAG
CTTTGCACACATTACTTCAATGTCTATGTAAAATTATATTGTACGTTGAA
TCAACGTTACGGATGGGATAGTCTAAAGTTTTGTGACGAACAAATCAGAT
AAATAAATCCAGAAAAAGATTTGCGTTTTACCGTTAGATTTAAAGGACGA
GTCCCGGTTTTGGCGTAGAGTTCCAGTCTCATTTTCCAAAGTCCGGATAC
CCCCTAAAAAGAGGTCTTCAAAAGAGCTCATAAAAAAAGAGGTCATAAAA
AAGTGGTCTTCAAAAGAGCTCATAAAAAAAGAGGTCATAAAAAAAGTGGT
CTTCAAAAGAGCTCTTAAAAAAAGAGGTCATAAAAAAGAGGTCATAAAAA
AAGAGGTCTTCAAAAGAGGTCATAAAAAAAGAGGTCTTCAAAAGAGGTCT
TCAAAAGAGGTCATAAAAAAAGAGGTCTTCAAAAGAGCTCATAAAAAAAG
AGGTCTTCAAAAGAGGTCATAAAAAAAGAGGTCATAAAAAAAGAGGTCTT
CAAAAGAGGTCTTCAAAAGAGGTCATAAANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAGGTCTTCAAAAGAGGTCTTCAAAAGAGCTCATAAAAA
AGAGGTCTTCAAAAGAGGTCTTCAAAAGAGCTCATCAAAAAAGAGGTCTT
CAAAAGAGGTCTTCGAAAGAGCTCATCAAAAAAGAGGTCTTCAAAAGAGG
TCTTCAAAAGAGCTCATCAAAAAAGAGGTCTTCAAAAGAGGTCTTCAAAA
GAGCTCATAAAAAAAGAGCTCATAAAAAAAGACGTCTTATGGCAGCTATG
GCGTTCCATACATAAGAGTGATAAAAACTATAGAATAATTCAAAGAGAAA
CAATTACCCGATTCTTTTTTTTCTTCTGTGCCCGAAAAGAT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00050038	TCONS_00050038	Clytia hemisphaerica	transcript
TCONS_00050037	TCONS_00050037	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00050037-protein	TCONS_00050037-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_167	supercontig	scaffold_167:373705..379245 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.81	2.25	0.8	0.49	6.6	3.71	5.94	6.1	2.45	3.92	2.99	1.89	2.8	2.42	2.58	2.7	3.14	3.26	1.78	2.2	3.72	4.4	8.33	7.87	2.42	3.44	4.12	2.49	5.41	6.01

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XLOC_031696 (gene) - C. hemisphaerica