XLOC_031702 (gene) - C. hemisphaerica

Overview


Name	XLOC_031702
Unique Name	XLOC_031702
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_167:667198..677153-

gene from alignment at scaffold_167:667198..677153-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_031702 ID=XLOC_031702|Name=XLOC_031702|organism=Clytia hemisphaerica|type=gene|length=9956bp|location=Sequence derived from alignment at scaffold_167:667198..677153- (Clytia hemisphaerica)
ATAGGGACGTTTAATAGCGGTTTGTGCACTTGGTCCAGTGGATATCGTCA
TGGGCTGTACCATCGCATTTCAATACTATGTGTCTGGAAATCTTATCTTT
CGTACTGTTGGTGGAAATTCAGTACTTCAAGGTATAATTTCATGTTAAAT
TATGTTTGCTTTATGCGGCTATGAAGGTCACAATTGTTTAAGTCATTGCA
TAACTTCTTTGCTTATGTCTATTAAGATTTGCGATTTTGGTAAGCTTATA
GTTGGTCTAATTTTCACTTAAAGCACTTAACTAGAATAATTTATATCGGC
ACCGTTTTGGACTGCATACTCAGGACAATATATCTAGAGCTTGAACTTAC
TGAAAAAGCTGTAAATCCGTAAATATTTGGTGCTGCTCTAACCTTTGTAA
GTTATAAGAGGCTTGTTATTTCGAAGAACTTCACATAATCATATTCTCCT
TCTTATTTTTCCATAGTAATGTGCAAGCGTATGTTTATGTTTACTGCTCT
TCTGAAGTTTGATTTCCAATTAGTCGTGAGTATTATCATTTTCTTTTTGT
TTAGGCCGGGACAACCTCCCGGGATAGGCCGGGACAACCTCGTTCCCTGC
GTTTTATCGGCTTTTGTTATGCTTACTGATAGCGCCACATAGTACCCTGG
CTGAATGCCTCTAGCATCTTTGTAACATCAGGTTCTTTTGTGACGTATTT
TTTTGAGAATTCCCCCCTCTGAGAGAGGAAGCTCGCATCATCCAACACCA
GGGCATTCTCTGGCGTCCATCAGTAACCTATATAAAGCCTGGGATACACG
GGGACGAGGTTAAAGCGAGTATTTTGTNGTGCTGTCCATCAGTAACCTAT
ATAAAGCCTGGGATACACGGGGACGAGGTTAAAGCGAGTATTTTGTCTTT
TCTTGAAAAATTAAGGCTTAATGCTGCGAGGCACGCAACTTACTTAGGAG
AGGGTGTTGACGCGTTATTACTGTCAAGTCAAAAACAATATTTGAATTCG
AAGTTTATTGGCAGAAATCTTTTTTGATAAGAAAATATACAATAATTTAC
AAGCCGCCTTTTGTTTTAAATTTCTCACATCTCCTTTTTATAAACTATAC
CTGTTTTTGTCACAGCGTCCGCGCTGGTAGTTAACTTGGACAATTTATTA
GGGAGATAAAAAACGTTGGAACCATTCTCAATTCTTATTCTGATTTTGGA
ATTGAAAACTACCTTTGATAATCGAAAAAAGTTTATATCGAATTTCATTT
TCTTCTTTAAATTGCGACACTCTTTCACTCTCTGTTTTGATAGATCAACC
TATTGATATTGATATTGGTTGGAAATGTACACAGAGTCACTCTTGGAGAA
TCGCTGGTAATTGGACTAGGAGCATTTTTCAGTATCATTTGGCTTATTCT
CGGATATCTGATGGTAAGTTACAGCCATTCTAATTCGCGTCGGCTTCGGC
TATTGCCGACTCAAATGCCGACCTAATAGTGCTGACTGTACTTTTGAATA
CAGAATTTTTTACCGACGCAAATAAATCTAAATTAGAAAGGCTCAGTTAG
TCGCTTGAAGTTCTATAGGGCTACTTAGACTACACAATATATTGACGAAC
AATATTAAGCAGATATTCGACAAGAAAAATCGGATATCAGCTTCGCTTCG
TCGAATATCATCAAGCTCGACTGAATAATTTCGAATAATTTCGAATCCTG
TAACTGTTGGATATTGTAGAAAACGAATCCCCAGTCGAAAGGTAGCGGAG
TGTTACAGCTAAACGTTCATTAGGTTGGATAGCTTCTCTGCGAACACTGC
TGCGTCTCAATTTTGGTCCAACAATTTCAAGGAGTTGATCAAATTTCTTA
GGACTCATCCTGAACATTTGATAAAAAATCTCATGATCAACGAGTCTACA
TTGCAGCACAAGTGACACGAACTCTCCTTTTTCTCTTCTATCTTTGTAAA
TATTTCTCACCCAAAATCTTTTATTCGATTTTGGTTTGTTATCTTGAAAA
GTTCTTAAATATTGTAGATGTCTCAATCTTGCTGATGCATGTCTTTTTCT
TCTATAAATCAAAGCAAGAAGAAGTAGTCTCTTTCTGTTTATTACAGCCG
CCATATTTGTTTATGTTTTTTTTGTTTTGGTCCCGTGATCAAGACGGTAT
TTTTGACGTAATGTTTACTCCGTGCGACCAATCAGGAAAAGGGAAGAAAA
TCTTTCGCGCGCTTCGCGCGAAAGTGGACACCGGCCTTTAGGATTCGAAT
GTTCTGAAATTCGAAAACTAGATTCGAACGTCTGTGATTCGAATGTTATT
GTAAAATTCGAATGTCTACAAATGTGGGACTTCCGCGTTCAATGATGTAT
GTAAACAACAACATCAAACAACAAACACATTGACCGGCTGGGTATATTGA
GACAAAGAACAATTTGAGCATTTTTACGCATGAAACTAGAGTTAGGAATT
TGTGTTGTTGGTCAGCCTAAGCTGAGCATTCAAATAGGTAAAATTTTCCA
GTTCCTCCATAAGAAGGCAAAAAAAAAATCCGATTTTCCGATCTCACTTT
GATTTCTAAACTTTCTTCCGATCGGGTTAACTTTTTGGGTACTTTTAGCG
TGCGTTGTTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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CTTAGTTTGGATGACTTTTCTTTTGTGTCAATAAATGTATCGAAAGACAA
GCACAACTTATGAAAATGTCATAATCTTTATAATAGATTTCCATTTAGAA
AATTCGAGAGGGCGTTTTAGGTGGTACTAGAATAAATTTAGCTGATAACG
GAAGTTTGGATATAGAAAAAGAGTTTCAATATAGTGGTTATATCTATGTT
TTTATCTTATGTAGTTAACGTCAAAATGATTTAACGTCAAAATGATATTC
TTGCATACCATGGCGGCTTCAGAAAGGCATATCTTTTTTTAAATTGATTT
TCGTGATTTCCCGTAAGCAAAAAAGTTGTTCAGAATTAAATATCCTTTTC
AACAGTATATAATATGTTAGGGTTTTTCGAAGATGAAATTTTTGCAAAAA
AAGTGCTGACGTCAACAGAAACATCATTTTCAAGAGTGTCTCTCTCAATT
TTTATTTTCTTTACTTCATGGGGAACCTCTGTGCAAAATTTCAGAGCTCT
ATCACAATTTGAAGTATCGTCCCTTTTTTATGTGATAATCCGCCCCACTA
ATATGGATTGCGGACCATAATGTACGAAGTAAACAACTGGTACTCTATTA
TAAAAAGGAATTTTCTTTCTGTGAACAATGAAATTGCCCTATATTGTTGA
AATATTGCAAATCGAGCTGACAATATATATTGCGAACATTTTCCATTATA
TTGCCGGCACATTTGAGACAGGCTTAATTAGATCATGTGTCGATCCTTAT
TTTTGGTTTTCTTCTTTTCGGATTTTTATTTTGGGCTTTTGGAAATTTAT
TTATTTATTTATTAAAGGATTGAGGTTCAAGGCGCGCCGTGGGCCTCTAA
GAACCTATCTTTTTACAAACGCTTGTTGTTACAATTTTCTTTAGNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTCCTCCTCTTTCTCTTC
CGTGAATACTCCAATCCTCTGTGTGTTTACAATTTTTATGTCCTTGATAC
CCAGTTGTAATCCAAGGATTCTGTACTTAATAAATTTCTCGTCGTAGATT
TTCGTTGTATTTTCGGGATCCTCAAAATTTTCCTTGATTCCATGGAAAAT
TAGATTGCATGCTGTGGATCGTTGTTTGCCGACTGTTTCACTTCGAGCCA
TTCCCAAATAGTTTGGAAACAATTGTCGGAAAGAAAACACATGTTTCCGC
CGAGTTTTTCTCCTTTAAAATCACTTTTTCCTTTACCAGCTTTTCTTTTA
GTCAGCTTACTTTATAGTCAATTGAAAATTATTAACCATAATACAGGTCT
GTGTAAAAAAGGCCTTAGGTCATCTAGTTCATAGATATATAAAACACTAG
ATCGGCCTCCGCTGTCTTTCCTCAGCACCGGCGGTTTTACTGTTTAACTA
CTTCTTTCTCTCCTTTTTTTTTCAGCTACGCTATGAATTGATGAGATTGA
GCAGTGTTTTTTGGTTGTTTAGTCTGGCTGAACCTGGATACATTGTGTAC
CTGTTCATAAGGGTATGTAGTGATTCTTTTTATATTTTCTTGTACCCCCA
TGATATGAAACCGAAAAGGCAGGGCAATCTGTTCCTCTAAAGGATCCTGC
ATTGTAACACGCATGCGTAANATATGAAACCGAAAAGGCAGGGAGTAGTT
TTCTAGATTCTCTAAATGCTTCTTTTTTATTAAATGCATAGTGGTACCAC
TGACCTATACTCTTGACTAACGTTTATCCGTCATATTTGGTCAGAGTCAT
TTGAAAAGCTTTGGTACCCTAATGGTAGCAGCACCAATAAGGTATATCCA
AAGGCTAGAGTAGAAATTCCTATGAAGGATTTGAAGCCACTTAGATTGCA
CGGACCGCGTGGTTTTCATACAAACGCTAGATTGAGAATATCATTTACTT
CCAGGATTTGAGAAATGTAAACTGGTGTCAAACTTGATAAAACTTCAATC
ACAGATTTTGATTGGCTGGGATTTAGAAACTGTGTCTAGGTTTTTGTAGT
AAGCTCAATATGAGCGTACAGTAAATTCTTAAAATAAAATACACGTGTAA
TCTTTCGCACATTGATGCAAAATGGTAACGCCCAAAATGTGACGAACCCC
AAACTTTGAAAAAAGGTTTGGGAAAAATTCTGGTCAGAAACAGCCCGAAA
TGCAAAGTTACTATATTTTATTTTTTTTTTCAGATTTTTTGTAGGAAGAC
AAAGGACAAAGTACTCTAAAAAATTGCTCAAGAAAATTTGTTTTGGTCTT
GAAAATCGGATTTTTGTATTTTAGGGAATTCCCTTTTGTCACTTTTAGGG
GAAATGGGCATTTCTCGCGATCGGCTTGTTGTTTTTCTGATTCTTTGCAC
GATGATGTAAAATTGTAATATTTAAAATCTGACGGAGCCCAATCTTTAAA
AGAAAATTTTTAAAGCAAATTTGGGTTCTGTGTTTTTAAGTGGGACACTT
AATCTAATGTATACCCAGGTCGAACTCATATCCCTTTTTTTACAAATTCT
GATTAAAAAAGGTGGATGTAACTTAGCCTAGAGTTTTAAATTCAATCTGG
ATAAGACATTTCTACGCTGGTTCTAATCAGTCTGTTCAATTTTCTTTTTC
ATTTTAGACTGGTAAAGAACTGAAGAAAAATGATTTGGATTTGAAAAGTG
CCCATACTATGCTCTTATATTGTGTTATATTGGCTGGTAAGTCCCCTCAC
TCTCCCACCTACTCTCCCACCTACTCTTGGTTGGGTACCTAATAAGCGTT
CCCGATCAATCATTTCCAACCCTGTGTCACTGCTTATTAATTTTTAGAAC
TATTATCGAACGTTAAGTTAATTGGTTATTAATTAATTAATACTTTATGT
GCCTCTTTATTTTTGTCGTCAAACCCTTAGCCTTTAGTTTTAACACCACC
AGAAATAACCGACCATCGCTTAATCTTTTCCTTCCACCTCTTGTTCGATA
AAACTGAAAACAAAAGTGAAGTCCAGTTTATTTTGCTCACTGTCCAGAAG
CTGGAGCTGAACTACTTTCTGCCTTTAATGATTCTTATTTGCCATCATTC
AAATCAGAAAACGAAGATAGTATACGGCAGATTCTCTAACTATTTTTCTC
ATTGGAAACATGCGTGAAGTGGTTTGGCTCTTAGACTTTAACTCTCTCTT
TAATCAATGATTTGAAAAATTGTGATCACGATTCATTCCATATAGGTGTG
GTTGCATTGTTGATTCGCATTGCTCTGGTGGTCGTTTCTATCATCGTCAC
TAGAAATTTTGGTAAAGGACTCAAGGAAAAAGGTATTTGTGTTGCTTCCC
TTTTTGAAATCCAAAGAATTTTAAATTCCACCTACCCTGCGCTTCAAACG
TGTTTTGTATAAAAATGTATAAGATGCTGAAAAACCGTCAAATTCAACTT
ATCATATTATTGTTGTAACTTTAACTCTTAATTTTTTCTTCAGTGTATGT
CGATGAGCCAGCATCTGATAGTTATGGAAGCACCCAACAAAATGCCAATG
AATAAAAGAAAATGCTTGGTAAAATCTACTCGGTTTTAAGCCGTAGTTTT
ACAATTTGAAAAATGCGCACACTGTGCTTTTACATTTCGTCAGCTTGCCC
GGTAAATCAGTACCCGTAACGAAAGCTAACCGTAGCCAAACAAGTTAAAC
CAAAAAATATTTTGACCTTTTCGTTTGGAAATTAATTATTTCATACCATT
CAATAAGTTCCTAGGTAATGAAATGTTTTCTTTTCCGCCAGCGGAACGTC
GCATTATTATTTTGTCTTAGCTTTTTGGATTATTAGGCTTTGACCATTGA
GCTTCGAGTTGAAGGCTAGAGGCTAATCTTCACCATTTCTCAAGCAAGAA
AAAGTAAAGCCTCTCTTTGTTTTCGCGGCCTACATTTTTCAATTTATATG
TGGACAAATGTTACTTTTAATCTAGCATTTGTAGGAAAACCACGTGGGCG
GCGCAACCTAAGCTGCTTTAAATCATAGCAGTTTCGACGCTACCCTTTGA
TTGCACCTTACTTGCTGTGAACCCTTATCTTTAGGTAATTTATGCTTTTT
AAGTTAATTTTATTTGAAAAAAAACCACACATAAAACATTGTAAATAATT
GGAAACCTTTATAGATTAGATTATATTTTTTTTGCATTTTCTTTAGTAGA
TTTTTATTTGGTCCTCATTTTCTTTTGGATAGTTTTGATTTTCTAATCTT
CGTGCACGCAATTCTTACTAAAAAATGATTATTATTGAATTTATAATTAA
AATTTT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00050056	TCONS_00050056	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00050056-protein	TCONS_00050056-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_167	supercontig	scaffold_167:667198..677153 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
38.61	41.92	45.06	44.72	5.49	5.15	5	4.5	8.12	7.2	11.58	7.92	9.3	8.06	11.96	13.06	6.28	7.51	8.4	9.57	6.73	6.02	16.94	16.61	5.65	7.49	7.38	6.76	8.4	8.94

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XLOC_031702 (gene) - C. hemisphaerica