XLOC_031712 (gene) - C. hemisphaerica

Overview
NameXLOC_031712
Unique NameXLOC_031712
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:959102..964705-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031712 ID=XLOC_031712|Name=XLOC_031712|organism=Clytia hemisphaerica|type=gene|length=5604bp|location=Sequence derived from alignment at scaffold_167:959102..964705- (Clytia hemisphaerica)
AAAAAAAATAGTTTAAGAACCATGATTGTTTTTCAATGTGCTATCTTGTT TACGATAATCTCTTCGGGACTGGGACGAGTCTTTGTAGTGGATAACACGT CACAACAGGACAAGGCTGATGGCTCTGTTGGATCCCCTTTCAAAACAATC CAAGATTGTGTCAACGCTCTCAAAACCATTGGAAAGCCAGGTAAATTGAT AAGATTTTTTTTTCGATCATAATTGTTTGATGAATACAGTTGAAGCATAA TTCGACGTTCTTTTATTCGATACACTACACTCCATTATCCGATACTATTG AAAGTCACTTTCAACAAAAAACTTTCATGTTATTATTCAATACGTTCCCT TAAAGCTTATTGGATGCATATTGGATGAAAATCCAATTCCTTTTGATTGA GAATGGAATTAGAGAGCGTCACCTATTGTAGTAAACATCTGCAGGCTACC TTATCGGGGAAAACTTCGTCGGGGAAAAGTGACGAAATTTTGGACAGGTG ACGAATGTTTTCCCCGACGAAAATTTTTCCCGACGAAGTTTTCCCCGATA AGGTATTTAATTTTAACGCGCCATTATTTTGACAAATATTAGAATACATT ACGATATATTTGTACTTTAGAATTATCGTCTATTGTTAACCGGTTACTTT TTCGNAAAAAAAAATAGTTTAAGAACCATGATTGTTTTTCAATTTGCTAT CTTGTTTACGATAATCTCTTCGGGACTGGGACGAGTCTTTGTAGTGGATA ACACGTCACAACAGGACAAGGCTGATGGCTCTGTTGGATCACCTTTCAAA ACAATCCAAGATTGTGTCAACGCTCTCAAAACTATTGGAAAGCCAGGTAA ATTGATAAGACTTTTTTTTCGATCATAATTGTTTGATGGATACAGTTGAC ATAATTCGACGTTCTTTTATTCGATACACTACACTCCATTATCCGATACA CTATTGAAAGTCACTTTCAACAAAAAACTCTCATGTTATTATTCAATACG TTCCCTTAAAGCTTATTGGATGCATATTGGATGAAAATCCAATTCCTTTT GATTGAGAATCGAATTAGAGACTACTGTAGTAAACATCTGCAGGCTACCT TATCGGGGAAAACTTCGTCGGGGAAAAGTGACGAAATTTTGGACAGGTGA CGAATATTTTCCCCGACGAAAATTTTCCCCGGCCTTAATGCATTTACCAA CTACCAGCAAGTGACGAATTTTTCCCCGACGAAAATTTCCCCGACGAAAA TTTTCCCCGACGGAGTTTTCCCCGATAAAGTATTTCACTTTAACGCGCCA TTATTTTGACAAATATTAGAATACATTACGATACATTTTGTACTTTAGAA TTATCGTCTAGAATTGGATCAAATTTTAGAATTTTTTTCCATAAAGTTTT GAAAAAGGCGGGAGATATGAAAAATCTTTTGCCGTCAATGAAACCAGTCA GAACTTGTGTTCTTTATCATTGTGAACTAAATGTATAAAAACCTCTTCAA CCAATCATCATAGAAAAGCAGAGCAGAATTCAAATATACCAACAATTTGT ACATTATAATATTTTCAAACTAACCACTTTTGCCGTTTAAAACTCGAAAG TACCGAGTTTATGGATGTGTGTTTTTAAGCGATGGAGACGGTAAGGTTCT AATTTTACTACATCCTGACCAACTGAGGACGACGGTAAATCAGCACCGTC CTCGATTTTGCAGGGCAGAACTGCGGGTTATTCCAAATCGCTTCAGTCAC TTTACCGTCCTCAAAAGCGCAAATACATAAACTCGCTAGTGATATCGCTT CAAACACGAGGAATATTTTTCCAACTTAGAGAACTTTTTCAAACAATCTT AGTTGAGTAGAGTTCAAATCTCAGGTTTCAATGAATTTGATTGTTATGAA TTGAATTTCATCCCAGGAGATGAATGCCAGATCCGTGCTGGACAGTACCA CGAAAATGTGAAGATTGACAATCTTCAAGGTACACCAAACCAACCGTTTA TGATCCGTGGATATGGAGACGAACGTCCAAAAATTGACGGAACAATTCCC ATATTTCCAGCAATCGATCCGGAGACAGGTGACCGTTATAATTGGAAAAC CTTGAGTGAGGATTCGAAAATCTATAAGTAAGTTATGTCTGGTTCCTAAT ATATACCGAGTTGTCCATATATTTGTAGTGTAAAGATTTCGATCACAGAC TTGCACCGCAATGAACTGTGTTCGAATCCCAATCATTTCTAGGTAAGGTG TTAGGGGAGACTCTCTATATCTTTACTTGGTTCCTAATATTGAAAGAATT GATGAATGTTGAATCTTTTAAAAAAGATGCTGAATGAAGCCCTAGTGGCA CAGGGCAATATACATAAATATATACTATATTTTCAGAACGAAAATCAATC AAGACATTTGGCAACTCTTTGTAAACAACCAAATGATGACCAATGCAAGA TGGCCTAACGCTAAATGGTCAGATCGCTCAATCTTCAAAGGTTCGTTATG GGCCAAACTTGACAACGCGTCAAAGAAAGGTTATATGGTGAACAAAGGAC GAAGCCTGGCGCAAACGAACATAAATATGACGAACGCAGTAGCCGTATTG AACATTGGTAGTTTCAACACCTTTGTGGCTAAAGTTGAAGATCATCAGGC TGGTCAGAATTGGTTTAACTACAAGGATACGTTTAACAATGACAAATTCA AACCATCTATCAGCAAATATTTCATTGAAGATAAATTAGAGCTTTTAGAC ACCCCAGAAGAATGGTTTTATAATCAGGAAACCAAAACACTATATGTGTG GATGCCAAACGGAGATTCACCAAGAGATCATGAATTGCGTGGTAAGGTTC AAACATATGCTATGGAAATTACCAATACTCATAACTTGGTTCTCAAAAAC CTAGATTTTTTTGCCACCGCAATCTCAGCCATCAGCAGTCGTTCAGAAAA TATTGATGGTGTGAAATTTGATTCACTCATCTTCAACTATCCGACCTACT CTAAACGAATGTTAGGTGATATCTCACTAATAAAACGTATCAGGGCCTTG GGAAGATCTAGGCGAAACTATGGAAGTTTCGTCTTTTTCAATAACACGTT TTATGGCTCTGACGGAGCGACCCTAGATGTTAACGGCTTTAACGTTACCT ACGACAACAACCTTTGGGAATACAATGACTGGACCGGTGCCAATATGCTC ACATTCAACGGCGGAGAAGGGCCGATCAATACTTACGCGCGAAATGAAGT GTACTATAGAAACACATTCCGGTAAGTTTTGTTTACAGAGTAACAAGCTT GTAGTTTTGCGAAAACCAGCATCACTGCCACCAGATTCACAATTTACTTT ACAACTCGCACTTTTAATTAGCAACTCGCACTTTTAATTTATAACTCGCA CTATAAATTTGCAACTCGTGCTTCTGATGTCTTATCAAACAATTTTCAAC TCGCAACTCGCGATTTTATTTTATTTTATTTTCGATTTTAAATGCAACTC GTAACTCGTAAAAAGTAGCACGCAACTCGCATATCTAATATCAACTCGTA ACTCACAAGACCAACTCGCAACTTGTATAGTATCCAATTCATAGTGTAGC CCGTAGATATCGGATAAATCAGACACGTTTTGCGGACGTTAAAAATTCAA AAAATGATGGAAGTTTCCACCTAGAAAAGCAACTATTAATTTAAAAAGTT CAACATATACCAACCGTTATCTCTTTCCAGGTACAACGATGCAAGTACAT CCATTCAACCTGGTTTGAATCCTCGCATCATATTAAATCACGTGGTTGGC ACGTGTTGGGGGACCATACAAAATGATGGCGCCGGTATTCATTTAATGAG GGGACAACAGATGAATGCTCAATTGAGATATAACTGGGTAAGATTTTAAG TTAAGAATCAAAGCCATCAGACGATATCATTTAGCGGCTAGTCGGCTAGA ATCTGTGGGATATTTTATTGGACGCAACAGCGTGGGGTTAGATTGAATAT TAGATCCATATTTCCGGTAGGAATGCCTTATATGCAGAAACTTAATTGAA GTAAAGTTGTAACAGATTTCTTCAGTTCAATTAGCGAGGTTAAGCAAGTG TTTATTTAGACCGTTCAATGCGATATCTGAGGCCTGTACATAAAATTTCA CTTGCATGGTTTGCTTTGGCAAGTTATGTACAGGCCTACGGTATCGCACT TTACGGTCAAAATAAACCCGTGCTTAACCTCGCTATTACAAAGATTCGCC GTCATGTTTTTTTTTCATTCAATCATCAGGTACACAATACTCCAAAATAT GCTCTTCGTTTTGACGGTCAACCACCGCGTATTGGTCGAAATGGAACAAT GTCGCATAATGTTGCTTTTCAATCAAACGGAATCATGGTCAAAGGTATTT TCTATACATTTATTAAATTCATGTAAATGAGGTAAATTATAGAAGAAATG TTTTCAATCAAGAAAATCTATTTGAAATATTCAAAAGGGGATAAGTATAA ACCATTTGTAATCAATGTGTTCATAGAATGATATCTAATCCCCAGTCCAT GGTGTTGGTAACAAAGAATTCTAAGCTCTGGTCTAGACTGCCCACTTTTC GCCCTGCCAATACTATTTGTGAACTAAAGTGGGTAGAAAGTTGGTTGTCT AGAAAGTCAACGCATTGCCCTCTTTTGACGTCAATACAATGACATTTTTC AATCTTTTTGAAACGAAGATTTTAAAATGCCAATTTTATGCTCAATTTTT GTCTGCTCTAACAATTAGAATAAACAGGACAGAAAGTCGGCCGTCTAAAC TAGTAGAGTTTATAAACTCAGTAGTCAATTTTAATTACTCTTTCAGGCGA CAGTCATTTGGTAGAGAACAACTTGGCTTTCCAGAAATACAATGAAAATG ACGATGACAAACAGGGCACCGGATGTTCCCTGTGTATCCTCAAATTCGTT CGAGCAAACCCTGGTCAAATCAACAACAACTCAGTAGTCATCAACAATAT AGCAGACAGGGCGAATGGCGGAATTAACGTATGGAAAAGACCAAATGTCT TCCCAGTACCAGGGCGTATCGTTAAAAATAATAAATTCAATGCGAAAATT GCTGAACAAATTATGGATCATAATAATTTCGATTTTAGGCCAGTCAAAGG TTCTCGAGCTGCTGTCAACGGAATAGGCCCGTACCGCTACGAAGAACGAA TGACTGAATATTGGATTCCCGGGCGTAAGTTATACAAAACATCCACCCCA GTCCCACAAAACGGCTCGGTTACCGTTAAAGCGGCTCGCCGTGACGCCGT CATGTTTCTGCAAGCTTGGGACTGCCGTACGCATATTATTTATTTTGGAT CAAACAAAAGAGCCGTTGAAAATGCTCGAGATGTCGACGATATCAATTAC CTTGGAACTCTTGAGAATGGTTCCAACGTTTTTTATCTCCCTAATAAATT GTCCAAATTAGCCACCTACTTTTGGCGTGTGGACGCTATGACAGACACAG GTATAGTTTATAAAGGAGATGTATGGAATTTTACAACAAAAGGCGACTTG TAAATTTGTATTGCATATCTTTTTATCAGAAGAGATTTCTGCCAATAAAC TTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050088TCONS_00050088Clytia hemisphaericatranscript
TCONS_00050087TCONS_00050087Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050087-proteinTCONS_00050087-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:959102..964705 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17 0.2 0.06 0.11 0.5 0.5 0.41 0.51 0.14 0.25 0.1 0.16 5.23 5.04 1.76 5.21 20.97 21.21 14.48 10.73 62.82 75.83 11.68 15.95 25.8 38.53 0.05 0.02 0.06 0.04