XLOC_031654 (gene) - C. hemisphaerica

Overview
NameXLOC_031654
Unique NameXLOC_031654
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:1171806..1182415+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031654 ID=XLOC_031654|Name=XLOC_031654|organism=Clytia hemisphaerica|type=gene|length=10610bp|location=Sequence derived from alignment at scaffold_167:1171806..1182415+ (Clytia hemisphaerica)
GGGAAACATTCAAAATGGCGTCAAATTTTGGCACGAAATTTTACTCGTTG
GGtatcttttctctttttgtttatcaATAATTTTCTCTGTTTGTACCTAC
CTATTTGTACCTATTTGTGGGTTCTGCTTGAACAGCTCATCTAACTCGTT
GAGTCCGATGCTTCGAAATTTTCTTGAGGCTGTTGGAGTCAGCTTGCCTT
TTATATATAtagtcagaaaatctgccgTACTGATTTGAATCCTGGGGCTG
CTCTACTCCCCCCatcagaaagaaaaaataaacgcAAAAAGTAGCCAAGC
TCCATCTTCGGGACTAGCTTGGCTAAGAGTGAAATAGTGGGCAAGCagtc
agtatagacttaaactcgtatatcaaattcaagattacgggatttcaaAT
ACAGGTCGATTTTActtcgtgcaaggcactgaaaggccacgggtgccaaa
aagaaagGCCATTTGAAATGCAGCAACCTCATTTCTCTCAGGGTACTCAT
AGTTGCCAACCGTCCCGTATTGGGCGGGACAGTCCCACATTGAGCGGTAC
AGCAGTCCCATTGTGATGAGCGGTACAGTCCCACATTTAAGCTCTTTGTC
CCGAGTTCCGCCCACATAAGACCCTGCCGATTCACCGGACATTCCGGCAG
TCAGAGGAGTTCTATCCTAATTAAGCATTTTTTTTCGATCGCACGGACTT
TCTTAATTAAgattatccctttgtttttcaatcctaattaagaatatata
tcaaatttctagttttttttcaaaaatacaaatttccgCAGATTCTTATC
AGCCTCCAATGAAAGAATTTAGTGTGTAGAGTCTTGAGTTATGACATATA
GAAAAATATTCTATTACCCGCGACAAAAACGCGTATAAAACGCGGGTGTA
TTGCCCTATCTACACCGTAGCAGTAAACATTTATATATAATGTAGCACGG
GTTTTAATATTCCTAATTAGAACTAACGTGCCTAATTAGGCAGATTTTta
cttatgacgtcattttgaagCCCTCCgcccaaattttgttttgatttttg
gctcaACATATCATCTTTGACCTGCTCTATCTATTGCTCATAGTTAGAAT
TTGCGGATTTTGTTTGTTGGTGAAGaatctgaattttaaaaatcatattc
ttaattaggattgaaaaacaaagggataatccTAAAGAGAGTCCGTGCGa
tcaaaaaaaatatgcttaattAGGATAGAACTCCTGACTGTCCGGTGTTG
TTTGTCCGTCCGGTTTAAAAAACAACGGAAAAATCACCGGACACAGGTCC
GGTGTAGTGTCCGGTGTGTTTTATTTGCTAGTGAAAAAATTGCACCGGAA
ATTTTTGCCGCGGCATTTTCCAATGTCCGGTGTAGCGGGCAAGGGCGTTT
TTTGAATCTTCCTCAGTCCCGCCCAATATACTTTAGCGCACGCCCATACA
AATTCTCATTTTGCCTATGGCCTAGGCTGCATGCATACCCTTTGCTTCTG
ATATGATATCGGATGTGTNGCCTATGGCCTAGGCTGCATGCATACCCTTT
GCTTCTGATATGATTTCGGATGTGCATCGTACAATATTTACAATATTTCt
gtccattgagtttcaagcccgaagggctagaggcaaaTCTTCAACcattc
tcaggcaagagaaattgaaaccacttatttcccttTCCAAAACGCGCCAT
AATCACTATCATTGTATTTGCCTGTTTTTCTCTATTTCTCTCCAACAGAA
AACCAATataccttatcagggaaaacttcgtcggggaaaagtgacaaaat
tttggccaagtgacgaagttttccccgataaggtaataaATAACATCATT
CACCAGCAGAATATATATAATTGCATTTTTAGATTGATGTTTGAATTCAC
AAAACACTTCACaacatatatttttatattgatGTTTGAAATCACAAAAC
ACTGCGCAACATGCAAATGCCCAGAAGTGGTAATTTCCAGAAAAACTAAG
CTTTGGAAACACGAAGTTTCACCTTTCTCGCCGGAGTTCCTTGGTTGTAA
TTACTCAGCTAAAATATCCAGCTTTTCGGGACTTTAGAAAACAGTGCTCG
TGACCACGTGTTAGCGATATTCATTTTAAGAAAAGGCCGTGCAGACCGCG
CAGTACCACGAAACGCCCGCTAGAAAAGTGcgcaccggacagtccggtgt
agTCCGGTGCACACTTTTGAAAAACAACACCGGAATGTCCGGTGAATCGG
CAGGGTCGTGCCCGCATACCTTAGATGTCCCGCTTTTTCGAGAAAACTCA
GAAATTCGTAGAACTCcggaaaaaatatagaaatgctACTAAAAATATGT
TTGCACAAGCACAAACTCACTTCCTCGTTTTTTCTCTGCGCTCTGTAACA
GTTCGTCCAATTGCGTGCGTCCGTATTCAATACACCGGATACGCGTTTGA
CAGAGATTTAATAGTACTACATGAACTGTCCAGTACACCTAATATTTATc
tggttgaaaattttgctttatttctacttttaTATTGTTTTTAACCATTC
CTACGTCATTTCAGgcctaaaaaaattttcaggggGTTGAGAGCGCCCCC
AAAACCCCCAGCTCAATCTTTCTTGCTCGCTCCGCTTGCTGGTTGTCCCG
CATTTCCATTCTCATAAGTTGGCAACTATGGGGTACTTGTCAATGTACCA
GAATGTAcacaatgtgttgtgtcaacttgtcagcattgtattgttgtaaa
gagaaagataaaagaggtaagactagcctagtttctaatcctgatatagg
agtttaagcttagactgGCAGTGGTTCGTCTGGAACAGTTTTGAGGAAGG
TGTGTCTAAGCTGGTGTCGGGTAGAATGTAAATGACTAACaaggcaaaaa
ttttttcaatctgCGGAAACGTTTAGACCGGGGTATGGTGGTTCCATTTA
GACGGGGGTTCTGTTATTATTAGTTAGGGTCAGAGGGTTGGACTCGAGGG
TCACCAATAGGGCTGGGAGCTATTATATATATAGAGTCTTTAAATTACAC
CCTAGAAGTATTCGTTCGTTTATTTCTGCCGTGTCTCGCTGGCGCAACCG
GTTAGGCGTCGGGTTTGGAAACCAAGGTTGTTTGCATTTAGTGGTTCGAG
CCGAGGTAAGGGAGTATATTTCAGAAATAGGTTAAAAAAGTCAGAATATA
ACttacaatatttcaaaaactcaGAATAACATCAGAAAGTAGAATGGAAG
ATAGGAAATagagaaagtagaaaaaatcgCGGAGCGTCATTTACAATCTA
CCCACGACCGTCTAAGATAAggtgttttttgaatttttttttggaggCAG
TTTTTCCAATCTCTTATTGCAGTCAGGGCTTCCTTTCAATTTATCAATAT
TAGGGTAACTTTGTCTAATGTCAGTTAGTcgcactaggaaatcaagcttt
tagaaaaaacaacatcagtcatctacaggatgtatttgcaacaacaatta
attaaaacttgaaaagttaaaatgaGACTTAAAATGACcgattgcgaacg
tgcagcaaccagaatatcaaccaaccaaattttttacatcacatcccgag
acagcgcttcgatttctAAGTCCTTGTtcatacgctaaagtaaaaataat
tcggctcatgtaaatgggtcagtgtttgaggtctggCAAAATTTNTTCAA
AACTTCACTATACATTGCTTTGTCTTTAATCTCTTATACTTCAAGTCTTA
CTTCGCTTTTCTAGAGAAATGAATTGATGATACTTTCGCATTTTGTTCCA
AACAACatcgcaaaatactaaaaatgtttCGCAAACAGTTAAAAAATCGC
TGCGCTCGAAAAAATTGCGAANTAGATCTTTTTCTTGCAGGGTTCGAAAT
ATAGCTTCGCACTTCGCAAAATGCAAAGTGAATTATAGATTTAGCGACCC
AAAAAGATTTCTTAACTCAAAAATgcgaagttaaaaaattataagaaaac
acctattttgttactttctttcatttgtttatttattactttatcaactt
gctaccTCGCTAATTTATTCACTCNttttcatctatggctcaaattttgg
gcattttcttatagttttcaaaaatgttaatttcattaaaaagcactggg
atattttttcatgaattgccttactgtaacttggtctaatgtcgacaccc
cttctctaattccgacacccttttcatcagctgaaatttatagaaaggtt
gaaactgtttttctttgcttagtagtcagagaggaataatcctttttcag
tCAGTGATTCAAACTTTCATATCAACATtcttttctctaaagaagggtgt
cggaattagacgagggatgtcgatattagaccaacttacggtacgcGCGT
GGCAGTTAGTGCTATAATATTTtggttttgctttcgatttcaagcaaagg
tcttagcagtCAGGGCTtccttggtcttttttaacattagttcccAGGAT
AGAATAAAAANCCTCgctaatttattcactcgtttatctattgctttatc
aactcgccacttcgctactccacacatttgtttatctattgctttataaa
atCGCTACCTtgcaactttcttcattcgtttatctattgctttgtcAACT
CGCTACCTtgcaactttcttcattcgtttttCTATTGCTTTAAAAACTTT
CTACCTCgctaatttattcactcgtttatctattgctttatcaactcgcc
acttcgctactttatccatttgtttatctattgctttatcaactcgccac
ttcgctactccacacatttgtttatctattgctttataaaatCGCTACCT
TGCaacttcattcgtttatctattgctttataaactcgcaaCTTTGTTCA
CTcctttatctattgctttatctaatcgttacttcaaaacttcactatAC
ATTGCTTTGTCTTTAATCTCTTATACTTCAAGTCTTACTTCGCTTTTCTA
GAGAAATGAATTGATGATACTTTCGCATTTTGTTCCAAACAACatcgcaa
aatactaaaaatgtttCGCAAACAGTTAAAAAATCGCTGCGCTCGAAAAA
ATTGCGAAGCTCTTAgaatttataattcgaaccctgtcttgggaagttga
tcttcaaattagtttttaaggttggcttgggtcaaattttttcatctatg
gctcaaattttgggcattttcttatagttttcaaaaatgttaatttcatt
aaaaagcactgggatattttttcatgaattgccttaccgtaacttggtct
aatgttgacaccccttctctaattccgacacccttttcaTCAGCGCGTGG
CAGTTAGTGCTATAATATTTtggttttgctttcgatttcaagcaaaggtc
ttagcagtCAGGGCTtccttggtcttttttaacattagttcccaggatag
aataaaaacatacctgatcaacacaaccaaaccttttGTCTTCaggtctt
gcgtttactcttctTTCCTTCCTAACAACTTTTGcttttgcttatgtagg
ttttaaaacccacaagtaatgaacctcttatagctttatctgagtAAATC
TTGTCGAAAACCTTCTGttaggtttcattccgtacgttttttatccacat
gGTGAACTGGTTTCCCCGATCTCTCTATTTAAAAATTGGAATTTCCTGTG
gacaatatttttcatgaaaatttaccaTATtgtaacgctaatataatcta
taTAGaacaaacaaatattaaatttgactcTCTTTTGgttgtatttcaaa
atttcacgataCTGTAAAAtgaactatttacaaattatttttttaacaag
CGTTGAATCaatattgacatatttaatgatgNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggaggt
ttttgtaattagacagcatgacaaaggtttgttatattttagcataacaa
agacaaactcaggaggtaaggtaaattgtgttttgactgcttttaactgt
ttttctaataaagaatatcttcaaacttgacttcactgctTTTTGTGCTA
GAGGACTAAAGTCTGTACGAGGAACGATAACGATGTGTGCGATCGTCTCA
TTTCTAAATATTTCTTCTACGCTATTGGCGTTTCCCCGCCCCGCGCTCGa
tatttgagatatttgatGTGTTTATACCCCACCCTGCATTCGATAATTGA
TGTGTTCCCATGCCCCGCACTTGATATTTTGATGTGTTAACCCACCTTTC
CACTCTATCTATGATAGAATGGGGGAACatatatttttaaggaaatCGTC
TTTCTTTCTTAGAAACTGTAAATGCCAGTCAACCATATGACACAAATTAG
CATTTGTGAGTCATCTTTACGCGTCATCAACATAGATTGACGGCTAAAAA
GAACAATACAAAATACATCAGAAATGGTACAAATACTAGGTAAAACAGTT
TATAAAGATACAAAATGAGTCaataatagaaatagaaaactgTAGAATTA
TTACAAAGCAGAAGGAAAAGTATATAACATAAATACAGAAGATACTCACT
AAAAAATCAATTAGTTACACAAAGAATAAACATAAAATCAATGCCCAAAC
GGCATTAACATTCATTGTCTAAGGATTGAAGCAGGCAAAGATTACTGCGT
GGGCTGATGGCTGacaaatgttttttgaatatatattttcagttataatc
aaggtagaacaaactaaacatagaaatgggtattttttagtgctctatac
aaTGATTGGTATTTCTttaaaattctatgtttagatttttctaccgaGCC
CCGTTGTTATGAATGCGCATCCTGTTGCTaaaacctttgcttgaaatcga
aagcgaaaccgaAATATTATAGCACACACTGCCGCgcgcgtaatatcgat
aaagtgaaaggaaGTCCTGACTGAACAGGAcgcaatttttcttcttttta
atgaaaaaagaatccaatggttcttttaaaaattttacattttgagaaaa
ttagttttaactagagaaacctttttgtggcacacccggtacaACATTAA
GATCAGGGTGATATTTCTTAAaactcaaagaaaaaagaatcatACTAGCA
AAAAGATTATTCAAacttagagcaaaaaaaatttgcagtaTTGTCCATGA
TTATTTTTTCAAGATAtttaagttttaaattttgacaTGTTATTTCTGGA
CCATCCGGTATAACTTTTCACTGCAATTCTACAGACACCTGATCACAAAC
AAATCTTCCTTGCGGCTCGTCACCAGTGCAATTCTAGTATTTTCCCTgtc
aaaaactatttttctttgcttactagtcagagaggaaaaatcctttttca
atcagtgattccaactttcatatttTTCCTATCTCTTAAAAATAATGCTG
GAATTAGAGAAGGAATGTCGATATTTGACCAACTTACGATACAGTACAGC
TTAGAACATTGTTGGCTACATTATTCAAGCTAAAATACAgccaaatattt
ggggggacctgaTATGTTTCGGGGGCCTGAAATTTCAATGGCAAGGCTGG
GGGCTGACTATTTCTTAtactatttttctttaaaatcaccacatttttat
ttaaaaccCTTTATTCCAGTCTATTGATTCTGTTTGTTTTCACTTATGTC
TACCATCTTGAACTAACCGTTATACAGTAGTGTGGTGGCTGGGGGCAAAT
GCCCCTCGAGCAGAGGTGTTTCAAATGGCGCCGAAAAACAAAGGACGCAA
AAAGATACCACTGATTACTAGATATGgtattttttggccaaaaaagagag
aaaacacCCCAAAATTTTTGTCCTCACTTTGCTCGcgttatttttaaaga
aatatttacttATCATAGCgggcgccaaaatcaaaatcttctaaaattgc
ctACCCAGTTtaaccaaattttagttgacccaccacgctactgcgcATTA
TAGTCATTTTCACCCACAAAATGAAGGCCTTTTTACATCTTAAAAACTTT
AGGATTTCGAGAATGGCAAAAGAATAGAGATGTATTTTCCTAAAAACAAT
ATtaaatcaacaaatattttatactAGGTATAGGACTTGGGACTTGGATC
ACAAAAtcacttaaattttttttctaaaattttagcttgaatattttggc
taatttttctgCAACAGTTGATTTAGCACatctttattgaaaataaacat
CATTTGATTTAgcaccatttttttgaaaatgtacaATGAAATTNACCCAC
CACGCTATTGCGCATTATAGTCATTTTCACCCACGAAATGAAGGCCTTTT
TACATCTTAAAAACCTTTAAGATTTCGAGAATGGCAAAAGAATAGAGATG
TGATTTTCCTAAAAACAATATtaaatcaacaaatattttatactAGGTAT
AGGACTTGGGACTTGGATcacgaaattttttttctaaaattttagcttga
atattttggctaatttttctgCAACAGTTGATTAAAGCACatctttattg
aaaataaacagCATTGGATTTAGcaccattttttcgaaaatgtacAATGA
AATCGTTAATAAGAAAGACCTTTACACTGTTCATATTGGAAATTTGAATT
CCAAAGTCACAATCGAagaattgaaaatattatttgttgGCACTGGAGAT
GTCCGAGATATTTACATCCAAGACAAATTTAGTACTAATTTTACTTACGC
ATTTGTCAGGTTCAAAACAATTGAGGAGTGTGTGAATGCGTGTACTCAGC
TTCACGGTACTATCTTACATGGATCGGCCATTTGGGTTACGCTGGCTGAA
TCTACAACTAACAGAATTAATAATAAACCTTCACAGAGATCTTCCAATAA
AGATAGGAGTATATTAAAACCTTCTCAACCACGACGGGAAGGTGCTCATT
ATGTGTCGTcacaaaaagatgaaaatgaaatccaCAAGAAATTGACTGAT
AGTTTGActgaattaaagaaagataatGAACTGACCAGATGGATTGGAAT
TGATCGAAATGATGAAGCTGAAGTACaaaattatatggttgattttAAAG
ATGGGCTCgtggcaatggccaaaataccAGAAGCTGTTGGAGTAGAAGCT
AAatcctttgaaaaaaatcaagatatgGATGATCTACAGAAATTGATCAT
TAGCCATCATTCTTGTGCAACACCTTCAGAAGAATATTTACCATTCAAAA
ACATTGACTTTGATGCTAGAGCAAAGAAGTAAtttaaacagtaattttgc
GTAAGCATGatatgatttttgttgtttccagtCTTGTGTcagattttatc
ttttttaaatttagtgtgtaaaatttttatataaatttcatTATACCTTT
ATAATTAGATTTTTACCTTTCTAAGCCATTTACAAAGCTgagaaaattga
agaaacaaaaaggaaattggtaaaaactttgttaaaaattttgtaaattt
tgttatTTAGTGCATATTATTGTTTCATATCAGATTATAAAGTGATTTAT
TATCATCATTATCAACTTATTTCTGTGGTATGGTAATCAGGAGGGGTTCT
AGATTTAAGGCTTCTCCCTGaatttttaaagtagaaatgtttTACAAAAG
TTTGCTTCTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049940TCONS_00049940Clytia hemisphaericatranscript
TCONS_00049941TCONS_00049941Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049940-proteinTCONS_00049940-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:1171806..1182415 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.99	6.71	11.69	15.51	6.78	10.63	7.42	2.11	8.72	5.06	4.88	2.15	5.18	6.05	5.06	2.94	5.56	7.57	1.62	2.7	4.68	3.19	30.1	11.48	5.55	5.13	2.6	1.53	4.4	6.78