XLOC_031720 (gene) - C. hemisphaerica

Overview
NameXLOC_031720
Unique NameXLOC_031720
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:1229898..1236668-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031720 ID=XLOC_031720|Name=XLOC_031720|organism=Clytia hemisphaerica|type=gene|length=6771bp|location=Sequence derived from alignment at scaffold_167:1229898..1236668- (Clytia hemisphaerica)
TTAGCTATTACAATTAAAAAAGACTAGATTCCAGTCTAAAAACAAATGGA ACAAAAACCAAGATCTCGAAATTTCTGCCGATCACTGTTACAAAAATTGA CGTCACAATTTTCAAAAACAGTTTGAGACACTTGCACGACTTCATTGTGA CCAAAGAAAAAAAAACATCAACACACAACATACACAAGACTAGTTTGATT GCAAAGATTTATCAGCAAAAAGGAAGAAAAATGAGGCCTGAATTGGGTGC TCAAATTACGCTATCTTTTCTGGCGCATCTCAGCATATTCTTTGTGGCAA ATCAGTTCCTAAACTCGTCAGGTAAGATAACACGAAATATTTCCTGTTTT GGATAAGGAAAAAAAACTACTACTGCGACTAATCGTGTAGTCTTATTGTA TTAGATCTTTATTATTCCATGGGATTATTGCATCTGAATGCAACCGCAGT CTTTAAAAGTACTATTTAATTCGATTTCTTTTTTCTTGCAGAGTTTCCAC GTTTCGATATCGCAATCAACACAACACAAATTACAGACTCTAGCATCACC GTTTTCTGGAAGATCACCAAAGATAGCCCAAACATTGAACTAATTAAAAC TGCTTATGTCAGCATTTACAGTTTAGAAATTGAAGATTTGACTTTCCGAT CAAGACCTTTCAATAACATAACGTATGGCGAGTATCGGTTAACAAATTTA CAACCCAAAATGAAATACAATATTTGCATTATTTTGCGGACCCTGAATGA AATGGAAGTGAGCAAATGTGTTGGTGCAAAGACAGGAATCATATCAACAG GTTTGACATATTTTATTTCTAGGATTTTCTGGACTAATCTATTCTGGAGT GACCTGATTCTGGAGTAACCAGAAACTTTTATCAACCCTTATTTGAACTA AATATGACAAAACAAGAATGGGTAAAATTGTGAAAGAGGGTGCTTGTAGT AAACCACAGTAGTATTATTATACTACTGTGGTAGTACTACTGTGGTACTA CTGTACTATATTAGTATTAGTATTATATGAGAATCAAAATGCAAACATAT CATAAATCTTCCGGCTTTCTGCAAGTACTCCCAATCTACAAGTACACCTT ACGCAGTTCACTTTTAAAAAGTCTGAGTCGATCAGTTTTAAATTCTTTTT GTTCCGTCAATCAATCTGACGACTGATCAAAAAAATGCTTTTCCGTGTTT TTGTTTTTCATATTTTGCGAAAGAAATCACGTTTTAAACCACTACCATTG ATAGTTTCAAACAACTAACTCGATATTAAGCGAACTGCTTATACTCATCA GTGCAGTCAAAACTTTTCTAGTGACAAAGGTTTATACCAATAAATTAGAC CAACGCAGGAAGCTATAGTCAGGTTGATAGCAGTACTAAAATAATAGGCT TCTGCTCATCCTCTAGAGCTTCTTTATAGGAGATATAGAGGCCTGTGATT TCGACTACTAAAAGACACTTTTTTCTAATACTTGATTGTGACATATGAAT CAAAGTAGACACGTCATAGAGATTTTAAAAACCCATTTGCGAAAACCCAA AAGCGATTGCAATATAGTTTTCGAAATAGAGAGCAGGAAAAGGGATACTA CTTCAGAGTAATATTTATTGTTTACTATATGAGAGAGAAGAGGTGGAAAA ACGAAGAAGAAAATAAAACATTTTGATTAAAAAGTTGAAAGTTTGAGAGT TGTTTGAAGAGTTTTTTCGTTGAAGAAACGTCATCGCTTGTCGAAGGGGG GAGGTGGGCGAAACCCATCAAAAGACTCTCTCGATAAACTCCTTCTTTCC TCTCTTTTGATTACGAAATCGTTTAAAATTGAAGAATGAAAAGTCTAGAA CGGAGGCTGGTCGCAATGAAGTCAAAACTATTTTAACTTTAACTTCACCT TTTCTGGTGGTCAGGAAATATTTCAACTTGCCTCACCTCACAGTACTTTT TCCAGAATCATGTGATCAATTCTGAATCAACCAGAATCTTAGGATGTGGT TTTCAATTTGAAATGACTCTTTGGAATAAAACTGTTTCTAATGTACTACT ATAGCTTACATACAAGAAATGTCAATGCCTATAATGCTTATGCATACAGG TGGAAAAAATTGTACTCCTGTTTAGACTAAAGCCATCGGCAAGTCACCAG TCATCATGTCAATGCCTATATGAAACATTCTTACTCCCGTCTCGGCTCGA GCCCTCAGTTAGGCTGCACACATCCCCTCTGATAAGTTTTGATATGTTAT ATCAAAACTAATTTGGGGATGCATGCAGCCTAGCCCTCAGTAAGTTACTA CTTCCCAATGCCCTCTGTGCTCATGTTCGCTAAACATAAACAACACAAGT GTTATTTTTATTCTTATTCCATAGGATCTCGTTTCAAGTTGTTACACGGG CTAACGTCGACAGGAGGTGGACACACCGGTCAAATCATTTTCTATTTGTT GCTTGTGGGAAGCGTCTTTTTCGGAGCATCATACTTTTCGTACCAAATCT ACAACAATGCACTGAATGGCGGTAGACGGAGACGAGGAGAGACTGTTGGA AAAGAAATGAGCTTTGTTTCGTTCAGTGACATGTGCACTGAAGGTGATGA CGGAGATGATGATTTTGATGTCAATATTAGAAGGTTTGTTTACGTGATAA TATTCTATTATATTCATGGTATGTACCATTATTGCAATGTCTTTTGACAT TACATCGCGGACCCTATAGCTGATTGGTTGTAAGTGACGTAAAATCACTC AATACGCCACTTCTAACCAATCAACTGTTGGGTCCGTGGAAGACTAATTT GTTCCACCCTCTACTAAAACCTTTTTACAAGAATAAAAACAGTGGTCGTC AGAGTTCGCAAAATTTTTAGACGGAAAATGGTAAAAGAAATTGTCCACAA AAAACCATCTTACGATTCCCAAAGAGAACTTGAAAGCCGAGATTATGGAT TTCCCGTTTTTCTGATATCTAGAATAAGAGAAACAAAAATAGTCAAATGC TTACTTCATTTTGAGGTTTTCTTTTTAAAGACAGGAGCTTACGTTTTAGC GGTAATTGACACACCCATAAAGATTTGACTGGTCATGTAAAGGGTATTTA AAACTTATTAAAAACCTATAAATATCTTCTCAAAAAAGAGCTTTAAAACA ATCACCAGAAAATCAGGTTACGGTAACGGCCACATCGCGCTTGAAGGTTG AAACGAAATAAGCTCTGTGGCACACTTTTAGTCCCTGTATATTCAAAGAA CAGAAGACCCTCTTTTGATCTCCATGTAATGACTTCTTTCAATCTTTTCA AGCAAGGATTTTAACTGCCAGCTTTCTGCCTACTCAAAAAATTGGAAAAG CAGGGAACAAAAGCTATTCTCTTAGTCAATATTAGGAACTAACATCAACC TATTAAGAAGCTTCATTTCGATTCGAAGCCATGTGCCTAGTGTACCTCGT GTATAAGCAGATTTATGTATATAGCCTTTTAAGGAGGGCGAAGATCTAAA GGAGGAGTTCCGACAGAAACGCAAAATCAATCAGAGTTAGTCAATCAAAA ACTAACCGTCTCCATCGCAGAAAAACACAGAAACATACACACTCGCTACT TCCAACTCAAGTGAACTTTCACCATAACGAGAATTATGTTCCGTTGGAGT TTTTTTAAATCTCTCCAAAGAAAGTAAGTTACACAGCGTGACCTCTCGAT AATAAAGTTACAAAACAAAATGGTGGTCAGCCAATAAAATTGCGATATTG ACCTTCGACCTTGCGAATTACGTGATAGACCCTATGTGTGATCAAAGTGC GTCGTTCATCCAAGTAAAAAACACTCATCCAAGTGAAAAAGAAATCAGTA AGGTTTCCTCGTTAAAGAGATCCAAAGCCCACGAAAACATCTTTAGTACA AGCATGTAGCAAGTACAACACAAAATACGAGTCTATATAAAAAATAAAAA TACTTTCTTTTACAAAGTCTTAGATTAGAAGAATTACGTAAACTAGGGGG AGAAGAAAAACCAAGAGATTTCAAAACCACAGAATCTCGATGATGACATT TTTGGATGATCACTCACTTATGCTTTTCATACAAAACTCTGTTGAAATTG TCTAGATAACTCTTAAGTAGAGCCCAGTAAAGCTATTGTACATTGCACTC CCCATAGTTCGAACCTCTATAACTCGAAATGTTCCTTCAGTTAAAAATGT CTTATAAACTAGCCTCAACAACTCGAAATTTCCTCAACTCGAATAAAGTT GTGTACCCCGTGCTTGTTTGAGTTATAAAGCCCCCCTGTAGTATTTTTGT TTGGGTGATAGAGGCAACAGAAATTTTCCCCATCATATTAGAGAACGTAT TACTTCGACAAACCTTTAAGGATTATCTCTCTTTTTGGCGCTGTAACAAA AAATCTCAGAGATACAAACATCATCACTCATGCATTATTCATCATACTGG CGAAGAAATACTTCAGAAAAAAGAGGAAAAAAATAAAGATATAGATTTCA GCCTTAAAATTTCACTATGTATATTATATTACATAGTATTGGAATATCAG TCTCGAGTGGTCCCTAAAATAAGGACATCAAAAAAGTTTGTCTGAGTAAT ACAACGCCAATCACTCCCATATTATTTTTCTTCCCAGCCCATCATCGTAT CAATTCAAGTGATATCACCTTACACTCTATTCTCTTCTTTCTCTTATATT TTCAGTAGAGCAGAAATCTTTCACTTGAAATCGAAAAAAATCTCCAGTTT TTTCTCTCTTCCCCCCTCTCTCTTATTTTTATCTGGGAGTAGGAGGTAAG ACGTATAAAATCTTGAACTGTTTTATCTGGTAAGTGGGCGGGTGACGTCA CATAATCACAACAAGAGATGTCTCAATATTTTGATCCGATGAAAACACTC CGTGTTTAGTCTGTTTCTTATTTAGGACATTACTCTTCTTGGCCTCAAAA CATCTCTGCTTCACTGACTTTTATATATCCCTGGACCAAGCTATATCCGC CATCTTTGATCGATATTTTTTGCATCGGTACCCGTAAAGAAGCCATTGCG GTGTTATAAATTAACGTCTAACGGCGCTACATCATCAAAAGTTTTCGAGG GAAAGTAGATCCATCGCCCTCGATGCATTTACACCGCTATTGAGTAGTCC CATTAGGGTACCACTTTTCAAAAAAAAACTCCGATCAAAGATTTGGCTTG GTCGGGATTGAGAAACTTGGTCCAGGTTATACAAAGGTCAGCCCTGCTTA GGACAAAAGTAGCACTAAAGGACTCAGGACAAAACATTGAAGAAGTAAAC TATAAAACAGAAAGGGTTGAAAAACAACGAATCTCGAAATATCTCTATTT ATTCCAAATAAAATTTCTCTGATAACCGAATAGTTCCAATTCATATACGC GCATTGCATCGCTTAGTTCTTACTTTCAAAGTTCAAAGACTCTTACCAAA TAAGCCACCCTACCAAATACTGTTTACAAAAATCCAAAACATTAGCCTGT CACCACACTTTACTCCGGTAAGCAAAAACAGCGCACAGTGTTTCAAAATG GTTTCCGGGTCAATGGATCTATTTGCCTCGAAGGAGAAACTTTCTATGAT AACGGTGTTCCTATGATAACAGCAGACTTAACCACACAACGTCAATGTAA TTCAATAATCAAGTTGTGAAACAGAGGAAAGAAAGAATCCTTGTTCTTTA CCATTGACAAGAAATTTTATCTCAGATAAGAAAATAAAACCTAAACATAA ATAAATAAGAGTACCTTTTTACTGTGCTCCAAGTGCGGTTTATGAAACAA GTTTGTTACTAAAGAAAATGAAAGAAGCATTTTAAGAAATTTCGATAAAG CCAGTCCCCCGGTGCTAGGGGAAATTTTGCAAAAATATCGCGAAAGGAGC GAGCGCGAAATTTTTTTCGATATTTCTCCATTTTCTAGGGCTAAAAACTG CCATTTGTATGGTAAAAAGGGGAAAGAGGCGCTGAAATCAGTGTTGTGAA AAGCCTTTTTGCGCCCCCCCCCTAAAAAAAAAACACGAAAAAAACACCAC GCTAATGCACATATCCTCTTCCAAAGGTCAAGATGTCACAAGATGATCTG TGAAAGTTGGCATTTTAAACTTTCTAGCAAGGACATTTGACTAAAACGGG CTCTCTTGTTTCGTCTGAGGCCCAATTCAACTTGACGGAGAATATGTATC CGTGTTTAACTTAACAATCTGGCAGGGAGGGAGCGCTATGGACCCGTATA AGGAATACCAAAGAAGAAGGAAATTTCACAGCCGTAATGAGTAACCAGGA CCACTGCACGCTAATGACGACTTACTATTGGTCCAAAATTTTGAAGATTT TTGCGTCTATCCAACCGGCAGTCGTTACTAGAGCGCAACCAGTCCTGATT ACCCAGGATTCATTTCGACTGTGAAATAGCATATACTATATCATTATTGA AACTTCCAAAGCACAAGCTTGAAAATTAACCATACCTGTTCATTTTCAGT TCATGCCTTTGTAAACGAACAATCAGGTGCATCCAGTCTAAAAGGAAAGT CAAAGTTGTGAGTGATTGGTCTAGAAACTGCACTTTATTGAATTCATTTT CTCTTTATTTAGACAACAAATGGAAGAACCACTCATCACCGAGGAAGATA AAGAAATCAACACTCTTTAGTGAGTGAAGCCAGACTGAAGGACTCCGTGT CGCCAATGGACCTCTCGTTGCCTAGTTATTTTGTAAGATATGTTTATTAG GGCTAAAAGTGTATTTACAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050104TCONS_00050104Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050104-proteinTCONS_00050104-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:1229898..1236668 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.24 0.09 0.74 0.41 0.92 1.17 0.36 0.22 0.47 0.45 1.07 0.88 1.92 2.45 1.08 0.91 1.26 1.93 1.43 0.84 1.16 1.76 230.91 98.46 0.41 0.31 0.89 0.81