XLOC_031666 (gene) - C. hemisphaerica

Overview
NameXLOC_031666
Unique NameXLOC_031666
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:1538981..1542679+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031666 ID=XLOC_031666|Name=XLOC_031666|organism=Clytia hemisphaerica|type=gene|length=3699bp|location=Sequence derived from alignment at scaffold_167:1538981..1542679+ (Clytia hemisphaerica)
TATTCTCGAGAAATCAGTGATTGTATGCCTTAGTTAATCAATTAAATTGA
TTATTTGAGGTTTTTAATCTTTAACAAAGTGAACAGGCACCTTCAATTCC
ATTCAATCAAAAtcataatcaaaagaaaattgaaaaaggaaaCCAATCAT
TAAGTTCACATAAAAGCAATAATTAATCGAAAATAACAATAAGGTATAAA
ACAAACCGGGCCAAAAAATACAAATCTGGAAAATCCGGGCAATACGGGAA
AGAAATCAAaggaaaaacaagaaattaCTCTGACAGTGCGCTCTTGTTAA
AACACAATAGATAATTTAATGCGTCTTAGAAATTGACCGACTTTCTCTGA
TTGGGGGATTAAAGAGTACAAAAGATGGCTTACACAATTCTATGATACCA
TATTTCCACATGGATTAATTTGCTTAGAGAACTGGGATCTAGTCTTAGCC
ATCAAATTTAGTATAAATAGAGATGATTTTGGATAAAGCAAATCACTTCA
CTCTTGGAGAACAAACAAGAACAACACATTACAAACAGATAAACAGACAG
ACGGACAAACAACCAAACAGACAATATGAAGTTAACAATTGGAATCATTT
TCTTCGCTTTATATACAGTGAATGCTGTTGATCTAAAAATGTGTGAAAGA
CGTAAGTTACAACATAATCTAACAAAATCTATAGAGGGGAGGTGTTTGTT
CGAAGGGGGTGTTTactaaaaattttccttaaggGGGaagcgtttattcg
aggggggcgTTTttaagaagggggcgtttattcgaagaaatACGATTCGT
CATAATGCTTTATTTCCCTTTTCTATTCACTTTTCTGCTGATAAATTGAC
TCAATAACTGATTACTCCAATATGAAAGATAGATTTCCAAACGCTTTGAT
TGTTATTTCATCATATTCTATTTTTCAATTCTCTTATAGAACATGGTGGA
CTCGGCAACTGGATGGACTGGGGTCCTTGCAAAAACAAAATGGGCTACGA
ATGCAGACATCGATACTGTGATAGTCCCGTTCCCAAATATGGTGGATACC
CTTGCTCAGGAGAAACAACACAatatagaaaaattgaaaaagtcgaTGGA
GGCTATGGGCCATGGATGAAATGGGGTGCCTGCAAAGAAGTCGGTTACCA
ATGCCGATTCAGATTCTGTGACAGTCCTAAACCTATGTATGGTGGATCTC
CTTGTGAAGGTGATATGATGGAAAAACGAATGACGCCCGCTGTAAATGGC
GGATTTGGTAAATGGATGGCGTGGGGACCATGCAGTAAAACTTGCGGGGA
GGGCGGTGTTCAAACTCGACATCGATTCTGTAATTACCCTAATCCAATGT
ATGGAGGTATGGACTGTGACGCTAAGGACAGTATGGAAACTAGAGCATGT
CCAGCTATGTACATGGAGGCTTGCCCACGTAAGTATTTTCACTATATCAT
GGTCTGAAAGCGCAGTCTTCTTTTTCTGTTCTATTATAATTGTTTTCACA
GATCTTGTAAAGTTTTCCGTAAATCAATGTTGGTCGTTGAGAAACTTTGA
TGAAGTTGTATCGATATTTTGATGGAATGATTTCCAATCAACTTTGAGTT
GGAACTATTGAACCAAGGTTTACCAGTCCACTGATCTTAACTTTTCTTCC
AAGACGACTTTGAAGCTTCTTTTTGCCGATCTTCAACCTGTGCAAAAGTA
AATGCTCAAAACTTATTCATATAACTCCTTTAGAACAATAAAATCAGAAC
ACTTTTGTATTAAGTACACTCCTACTTTCTATATTACAGCACCAGGAGTT
TTGGGAACCAAAGGAACTTACGGTAAATGCAGCCGTGGCTGTGGAGGACA
ACGTCAAGTTACTTACCCTTGCAACATGCCAGAGGTTTACTCTGCTGATG
CCAAATGTTACATGGGATGTTCCAATACTATGCAATATGAGAAATGCAAA
TGTGAAAGTATGTTCCTCTTTTTCGTTTATATTGTTCTTTACACTTTCTA
CTGTTGTGTAAAATCTTCAATCGATAGGCTTTCAGTTTCCCCTACTTATG
aaacttttttaataataatGTTTAAGAGTGGAGAAATGCGGTAAAAAAAG
CTACTAAAACATTGCAAAGCTCTAACTGATCAAAATGCGAATAGCTTTTA
AGCACAGTTGTTACCTACATTGATGAAATCTATACACAATCTTTCCTTTA
TCCACCAGGTGATGGACGAAATGTTTGCCGATCTTGTAAATCACGAACCG
ATCGAATGATCCAAAAATACCGTCTTAGTAAGTGTGATACCAAAAAAGAA
TTTATACTCTAACTCCCAATCAGTCTCTATGGTTGCGTATTTCTCTAAGA
GAGTGATGTATTTTGCCCTTAAAAATCGTATATTTCTTGTAACTCTTATA
TTGCATTCAGTTTAAGTTTATGTTTTGTGAATGGATAAATGGTTTCAACG
AGAACCAGAATGCTCTAAAATAATTGATAATCGCCAACGCAAGACTCTCT
ATTTTAATGCAATAGAAATCTCTAAATAATCGAAATACTTCTTTCACTGT
TTAGATGTTACCGATGTTGGACTTGCCTGCAAATTAGAGAACGATTTAGC
TGCCAAGATCTGTGGTCGTCTCTCAGGTGGCATCCGTGATATGTACCCTT
CCAACGATTTCTACTTTCTTCATTGTTCTGATGATGGACCTTGGTGTAAA
CCATGTGCCACTCGTGATTTGGTTTACAACCCGAAATGCGGACAATGTGA
AAAGACCAGAACTTCACCTTGCACAGGACCAAGTAAGAATGTCTTGTAtt
attttagtcattttcaaaAACCGGATTGGTCAAATTGTAAACAATTGGAA
CAATAAAGCTTTACACTTTTTTTGTATTAGAACacactatataagaacat
aaggctttgatgaccAAATTGATAAGAacacaagttaagaacatctttag
acTTCGCGGACTCAAAAGcatccgatttcttaggaaatcgcTCAAAAATA
CTCCCAGAGAGTTGAAAATAGGAacttgttaagaacatttttaggctaaa
aagtcaaaaagataagaacatccgaaggcttcaaaaaattttaatgttct
tataaaaaaaacgtgtattccacAAAGattctcttcttcttcatccTACT
TTAAATGAAGATTATTTTCggaatatttttaaacaccattTTCAACATAA
CATTTCATTTACTTTGCTACCGTATCTTAAATTTATCTCAACTTTCcctt
tcttaggaaaatgggtcaAGAAAGATGCTCCATCCTCAAACGACCAAGTG
GCTGATATTTTGAACGATGCTGACCTTTGGTAAACAGATCGAAAATAATG
ATGATCAATAAACAACAttcaaacaacaaacaaacaaacaaacaaacaaa
cacaaaaacgAAAAACGTTTCACTCAATAAAGAATACAATGCCAAAAGGC
AATTCAACCAAGCAGAGGGCAGCTTCCATCAAACCTGATGATCAGAATGG
TTGACATATTTTTTTAACCTGGTTTTTTAATTGTGTTAAATActaacatt
ttttaaactttctttgtctttttcgaatttttcacattttgtaaagtaat
tttttaccttttttaacaaacaaaaaaaatattttcaatttattttttac
aacGATGTCTTGTTGACGagacaaatttcaatttttatctgGGTTATta
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049972TCONS_00049972Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049972-proteinTCONS_00049972-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:1538981..1542679 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.89	0.38	1.03	0.98	0.75	0.84	0.2	0.19	0.37	0.3	0.51	0.41	4.17	2.11	17.14	14.84	0.25	0.33	0.08	0.17	0.11	0.3	0.31	0.42	1.49	1.9	0.24	0.08	0.26	0.15