XLOC_031673 (gene) - C. hemisphaerica

Overview
NameXLOC_031673
Unique NameXLOC_031673
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_167:1741808..1746050+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031673 ID=XLOC_031673|Name=XLOC_031673|organism=Clytia hemisphaerica|type=gene|length=4243bp|location=Sequence derived from alignment at scaffold_167:1741808..1746050+ (Clytia hemisphaerica)
CTTTAAGCGAGGGAAAGCGAGACAAAGTCAGACTTTTCGATGCAGCGCGT
TTTTTCTTTGTGTCCTTTTCCTTCGTTCACTCTTTCCATCAGTGACATTT
GAAAACCCACCTTCAAGCTTTATATACCAACGACTTCGAATACATAGCAG
GTACCACACATCTTATCTCTGTTTGGTTCGGACTAACTTATCTCAACTTA
GATTTACGTTTGACTtagtattttgttttaaaacttattttACAAATTAA
TAGCTGAATCTTCCTATACTATATATATGGGCTTTGTTCGAGTTCTTGTT
AAGCAGGATATTACTTTGTAGTAGTGTGCATCTTGGATGTTGCAATTTCT
GGGGTGACTGCCTCTGGTTAATGATTCTGCTTTGAGCACCAATGGATTCT
TTGCTTTGAGTGATCTTGAGGATAAATTTCTTCACGATCAGTCAGGAGTT
TTTGcctaatacacctttcctgCAATTTAAATTTCTCAGAACTGACCTGG
GAAAATATAAGCTCcacttttggttaaaaaaattctttgggAGGTGAACA
AACACATTTTTGCCTAACAGGGGTTAAGGTAAAAATTTCTAAGGTTTTCC
TCAAGACAATAGAAAGATTACAtatgccaaatatctcaaaccatttgatt
atccctttaatgaTACAAAAGTTAAATATTACACATGTTTTGTAATTAAT
CAATCAAATAAAAGTTGACTTTCTTAATGAGAGAATCCCTATTGGGTCAT
ttcagaatttgtctgtaacaggggggggggtggacgacACAGATTttcga
gggcaaaagtttttaccaaaattggaaatttccaaggcaagagaagaaaa
tgtatgaatttccaaggcaattgaattaaaaaaggcaaaaaaaaaaaaaa
atgcacgtcgtccgaaTGGGGGTAACAAAAATCTTCTGGAATGTCCCATT
AGTCAGGCAGCTGGGGTCACACAAAAAAGTGCTTTACTTACAAAGTTTGT
GAACAAACTTCTGTACTTCTgttgttttgaataaatatgGCCATTGTGAC
cacaaaatcatcaaccggaCACAAATTATTTACCAGGGGCGTCCGGGAAC
AATCTTGTTTTTGATGTCACAACCAAGGATAAAAAGTTATAACGCTTTGT
AATTTTGACGTCACAATTACCTTTTTTTCAGAATCAATATATCCTCtcaa
aagtcttctatatcaatttttgagagctttcgaatggtggtatgggtttt
catttttaagagtttgaattttcagattttttgcctCTCGGACCAGGTAA
AAGTAACGTTGCGGTTGTTAAAGAAACCTTTGTAACTTTTTATAGAGAAA
TTTTCACCTATGGTTACTGATCTTTTTCCTAATCTACGTTTGAAGACGCT
TcttttggtatataatatgatCATGTTTGTGAACGAAAATTTTTTAGTTA
GCTTAGGCCTATATGACATCATTTTGGGACCTGGAATATTACCGGGGACG
TCAGGTAAATAATTAGGATAGGTCTTGTTGATGATTTCTAGATATTTGAG
GTGTGTATTTTCGATTTAATTTGGTTTTGGATTGTTTGCACCCCGtccat
attttttttgtttcctcGGCTGCCTGACTATATCGGAAATTATCCCCAGC
TTAAATTTACGCTTGCTTTACTTGTTTTATTAAGAGACATATTTGAGTTT
AAGAAGCTGATATTTAGATCTGAGACAGAAGGAGAAATGCAAATCTAAGa
atttttggtggaaagaaaCTTGATGGATTTGGACAAGATATCAGTTAAAT
TAAGTTACCATCAAATTTAAGTGCGAGCAAAATTTTAATCACATGACTTA
AAATAGTTTATTCTTTTGCACAAGTTTTCTTGGCCAAAAAGTAGTTACAT
TTTTATTTATGCAGTTTCATGCCTTTTTCAACACCCTCCTCAaccaaatt
tttatgaaaaccaCTTGAAAAATCTCTCAAACTGAATATTTGTTGCATGT
GTATGAATTTTAATTGTTACATAGAAATTGTAGGTATGTAAAAATTAATG
GGAACGTTGGTTTCAATTTTTTAGGCCGGGTTTAGCTGGAATAAAATTTG
GCGGAAACACCTAAGCTATCTTGATTTCTAGATgttaaaacaacaaaatt
gaACTATTATATTCATAAATTATTTACTCCTTGGGccctaaaattttaaa
aatcccACCATTTATATGATGTTAGCTTTAAAACTCAACAAACCACCTTT
TATCAATAGTAATTCAAGCTGAATATCAGTTTTAGTCTGGCAGAACTAAA
GCACTTTTAATGAATGCTCTGTCATTTCAACAAGCAGAGATTTTCTAAGG
AAAGGAATATATACCATTGCTGCTGTGGAATAGCCGTCATTGATCTTGGT
TTCTGCACAAACAGTTAAGGATTAGGATACCTCTCCTAATTAGGAGTATC
AGGTATGTTGAATAGGAGAGCAGACACTTTGACCTAAATTTTTTCAGGTA
TTGCTTCGATCTGCGTTCGGAAAACTAAAGAAACTTTTTATTCATTGAGA
TTTGCACCAGTGACctaaatttcaagtaatttctcGGCAAGTTCCTCATT
AATTTGCCGTGCAGAGAGAAAATTTTGGGAACACgagctaaaatttgtca
ttctttcacAGAACAGCCTGATACAGTCCATATTTTTTGCGCGGGGAACA
AGCGTTTTTTTATGGTGTGGTGTGCTAATTAGcacgttttgagtggtttt
ggGCTACAGTTTTACATTCCGCCAGTCAAAAGTTCTTAAATTCAGCATAG
AATCTCACTTGCTTGTTATTTACATTTTGGAAGTGATAAGATTGCGCAAA
TGTCTCTGGTAGTTGAAAAATACAGCATTTTCAGTTTTTAGTATCTTAAT
TAGGATGttgattgctattttgtatacttttttgtaTCCAATTTAAGATA
CTCTCCTAAGTAGGTTCTGTAGGTATCATAATTCGCAATAATCCTCGACT
AACAAATATTTTCAGAGGGTTGACTGTCTATCATGGGCTAAATgagaaaa
ttctaattttataGAATGGCTGATACAGAAGAACAAGTCCCACAAACTGA
AGAACCAACCACTGAAAAGGTTGAATCAACAGAAGAGGAAAAGCCAGAAA
CTGAGGAAGAAGAAATCACAGAATTTATTAGAGACCCTATTCTTGATGAA
GAggaaatgaaaaaagtttttgttggtGGAATTTCAACAGAAAGTACTGA
AGATGAACTAAAACAATACTTTGAAGAAAAGTGTGGCGGATCTGTTACAG
ACACtgttattattaaaaaagaCACTGATAAGAAGAGTCATTTTGGATTT
CTGACCTTTGAAACATCAGATCTTGTTGATGAGGTCTTATTGAAAAGGGA
GGAATTGAACTTCAAAGGTAGACAATTGGATGTGAATAGAGCTGTCCCAA
AGAATAACAATAATGCTGGAGCCCATGAAAGAACCAAAAAACTCTTCATT
GCCAATCTTCCAAAAATGAACTGTTCTGAAGATGATCTTCTCAANtgtac
taactgattttaccctcaaaattggtgtataccacccccaaaaatgccaa
atttggcaattttttcactgaattcctcatttttgataccattttgctgg
gtacgtcttattaacggccgttcaagagttaaatatctcaatcattttcc
aagtttgttaaaatatctttcatgccttgattgaagaaaaaaatttgatt
ttttttttacttttgaaaaaaatgatttgaatttttttgcttccggaatt
ttcaaaaacctNCTGAGGAAGAAGAAATCACAGAATTTATTAGAGACCCT
ATTCTTGATGAAGAggaaatgaaaaaagtttttgttggtGGAATTTCAAC
AGAAAGTACTGAAGATGAACTAAAACAATACTTTGAAGAAAAGTGTGGCG
GATCTGTTACAGACACtgttattattaaaaaagaCACTGATAAGAAGAGT
CATTTTGGATTTCTGACCTTTGAAACATCAGATCTTGTTGATGAGGTCTT
ATTGAAAAGGGAGGAATTGAACTTCAAAGGTAGACAATTGGATGTGAATA
GAGCTGTCCCAAAGAATAACAATAATGCTGGAGCCCATGAAAGAACCAAA
AAACTCTTCATTGCCAATCTTCCAAAAATGAACTGTTCTGAAGATGATCT
TCTCAATTATTTCAAGCACAGACATCCCAAAAAGTATGGTACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00049992TCONS_00049992Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00049992-proteinTCONS_00049992-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_167supercontigscaffold_167:1741808..1746050 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
83.11	78.84	186.19	225.68	365.78	349.68	215.12	279.21	85.19	87.69	113.57	107.31	105.84	132.37	115.43	122.92	150.01	136.92	45.67	44.2	93.51	90.2	71.97	70.15	205.96	222.5	83.68	78.86	50.39	57.52