XLOC_031900 (gene) - C. hemisphaerica

Overview
NameXLOC_031900
Unique NameXLOC_031900
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_17:72539..76590+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031900 ID=XLOC_031900|Name=XLOC_031900|organism=Clytia hemisphaerica|type=gene|length=4052bp|location=Sequence derived from alignment at scaffold_17:72539..76590+ (Clytia hemisphaerica)
GTTAAAGTTTTTCGTTGGAGTGTATGAAATATACAGTTAAAGgtagaata aaaaaataaatgaagtacaaaaaattgattcataaaacttaaaaacaatA ATCATCAagtgttataaaaaaaaacggacAAATTTCTATAGAAAGTAAAA TCACACACAGTTGAATGAAGTGAAATAACAACTTTAGAATATTCTTGTAC TCAAATTTATCCAATGCGTGAGAGCTAAAAAACTTTCAGTTCCTTTATCG ATTTTTATGGCATGACTTTCAAAAACCTGATATCGAGCCCCTAAAAAaac ctgagaaaaaaaatatataatcgtggagattttcttcaacgCCAAAGGGC TCAATAAATACTACTATAGCTTAGGTAGCTGAATTTCAACTGATGTACTA TGTGTCTTGGGATATTGAATTAGGGGACTGAATTAAGTATctcattgaaa aaatcacaaCTTCCTTCGGGtagattttcttcatttttgtttaGTATTAT CACAATATGCAAGTTTATGAAAAACTGTTCCAAAAAGGTAATAATCGTTG AAGAAAACAGCAGAACTCACAACATGAACAAAATCTTTCCCTTCGTCATG AAGGATTTCTTTCACTTTGACATTTCTCCAGTCATAATCTTCAGGTATTT CAACCTTGATTGCTGAAGCTGAAACAAAGTCCGTTTGATTCATCAAGAGA GGACCCATTCCAAAGAAATTCTTTTGTGTCCCGGCGTATACGTGACCTTT TTTATCTACATGTACATTGTCTGGTGCATACCCGACATTGATCTGCGATA CACGTTTCAGCTGGCCTTCATTTTGTCGTTTATAAACTACGATCGTTGAC GTCGAGCTAGACGCCGCATAAATAAATTTCTTATCAGGGGACTGAGCAAG ACCATTTAAAACAGCACCATGAGCTACAATACTACTGTATCCTTTATTGT ACAATACAATATTTGCAGTGTTTAATGGAAAAATCACTTCAAATGTCGAC AAATACTTAAATCTCGAGCGAAGACAAAAAAACTTCACAAAGTTGGTGGC ATAAAATTCATCTTTGTCAATAATTGTTACGTCATTAAGACAGTTAAACA AATCATTTCGTATGGTTGATACATGGTAAACATCTGTAGGATGTTCAGAT GAATACTGGAATACTTCAATGGCATCAAAGTCATCCAGGTGGTTGACAAC ATACAATTTGACCACTCCATTCACTTCAAACACATCCATGCCATGAGGAT CAAAATTCTCCAAAAACTCTTTAGAAACATTCTTCATTTGCAAACGCTTC GCACCTTGATCAGGCTTGTTGAAGTCAAACAAATACAGGTTTCCTCTCAA GAAATCTTTGTTACAATTCGTAGAGGATGGACCGTTTGTCATAAATGCTA AACCATTGCTAGTCACACTGACTTTTTCCGATCCACATTGTATATTGGGG ACAACTTTACAGTTTCCAGGTCGGTGATTGATGTGGCGGGTAGCAACGCC ATGACTGCATAACCAAAGGTGGATTTGCTTTGCCAAAATGAAATACAGAA TACCAAACACAAGATGTTTCTTATTTAATGTCATCTTGGCGAGTAATCTT CAACCTTTTactctttaaaaagattaattttgATGTCGAATCGTTAATGG ACCAGATTGCTATGTTGTTTGAAAAACTCTAGAAAAAAAATAGCGGNATC GAATCGTTAATGGGCCAGAGATTGCTATGTTGTTTGAATAActctagaaa aaaaaaagtggacaaaattttacgaaatgggtttcttgaaaaacaaatag aaaaaatgtcgattttttgctcaatacatattttcaaacaaagagTTCGG TAGAATTACAGTGCAGTGTTTTAGCTCTAAACTAAGTtgcaataaaaaga aaattcaccAGACAGGTGAGTTTAAGTAATtataatttcatatttttctc tcaaaaagtAAAACAACTCAGAGTCAAAATGTAAAATGctaaatataaaa taataagaaacaaatttcataaagattaTGGAGCTAAGCCTTTTTTGCTG TTAGTTGCAGTATGCAATAATTTTGAACTCCAGACTTTGCAATAAGCAAG TTTATGAAAAACTGTTCCGAGCAAGTATTGGTCATTGAAGAAAACAGCAG AACTCACGACATGAACAAAATCTTTCCCGTCGTCATGAAGGATTTCTTTC ACTTTGACATTTCTCCAGTCATAATCTCCAGGTATTTCAACCTTAACTGC TGAAGCTGAGACAAAGTCCGTTTGATTTTTAGTAAGCTGTGCAAATCCAA ACATATCTTTCCCTATTCCAACATACAAATGACCTTCTCTGTCGATGTGA ATGTTATCGGGGAAATACCCTACCTCAATCTGTTTAACACGTTTCAACTG GCCAATATTGTAACGCTCGAACACAGATATACTTGAAGTGGATGTTGATG CagaataaagaaattttttatcaGGAGAAAGTGCTATTCCGTTGAATAAG GAACCGTGAGCAGCAATAGCAGTGAAGccttttttgtaaaatacaATGTT TGCCGTATTCATACCGAAAGCAAGCTCAAAGAAAGTTAAGAAATGGTATT TGGATCGGGAACAGAACTTGATGAAGTTGGTGGTATAAAATTCATCTTCA TCAATAATCGTTACGTCATTAAGACAGTTAAACAAATCATTTCGTATGGT TGATACATGGTAAACATCTGTAGGGTGTTCAGATGAATATTGGAATACTT CAATGGCATCAAAGTCATCCAGGTGATTGACAACATACAATTTGACCACT CCATTCACTTCAAACACATCCATGCCATGAGGATCGAAATTCTCCAAAAA CTCTTTAGAAACATTCTTCATTTGCAAACGCTTCGCACCTTGATCAGGCT TGTTGAAGTCAAACAAGTACAGGTTTCCTCTCAAGAAATCTTTGTTACAA TTCGTAGAGGATGGACCGTTTGTCATAAATGCTAAACCATTGCTAGTCAC ACTNATGATGAGGCTTGTTGAAGTCAAACAAATACAGATTTCCTCTCAAG AAATCTTTGTTGCAATTCGTAGCATCAGCGAACCCATTGGTGATGAATGC TAAACCATTGCTAGTCACACTGATCTTTTCTGAGCCACATTGTAAATCGG GCAACACTTTACAATCTCCTGGTCGGTGATTGATGAATCTCACATTAACA CCTTTACCGCAAAGCCAAAGATGAAACTGCTTTCCAAAAACAATGTACAT GATTCCGAATACAAGATCTTTTTTAGTTAATGCCATTTCTATAATCTGCC AGAATCTGCttgtaataaaatataatcATTTGTTACAAGCGGGTTTTCAA AAGGTGTATTGTACACCCATTTAGTACTTTCTTATACAGTGTAGTGATGT CAGGGGAATTTCTTTTGTGATGGAACACCAGAGGAAATCCCACAAAGAAG CCTATTCATGCACCCCAATAAAAAGATTGACATTGGTAAACTACAAATTT AGGCCCCATCAGTCCTTAATGAGATAACcagctatttttcattttcaaac atAGTCATGCAGCTGCTGTCACGGGAAAATTGGGTAGGGTGCTAACAATA AAAAACCTACGTTAATGTCAATCGAAACGTCTCTGCTAACATGATTAGGA AAAAGATCAGAAACCTGATagctgaaaaacttttttatagaAGAGCATGA ATCTGGTAATGTGGCCCACATTTCGATTTATTACTTTTCCTACTTTGAGG CTTTGGTGAAATCTCTAAATAGGTATATAGTCAtatcaaatcttattttt tctggtcaattttgaaatggGCAAGCTTAAACAGTAATTTTTTCTGATAT AACAGGTACTCAAATTTTTCTATAGGGTAATAATTCATAATATAATAATT CATCAACAACATGCTTTTTCAGCTTGGTTCTCACAGCCAGaggatatgaa aaatgaaaaacacagtaagaaccggaaaaaaaagtttttttggcatataa aatcaaaaatgttgcagacataactttttccgttcacaaagttatgtccg ca
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050374TCONS_00050374Clytia hemisphaericatranscript
TCONS_00050375TCONS_00050375Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:72539..76590 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PON2serum paraoxonase/arylesterase 2 isoform 1 Homo Sapiens
PON3serum paraoxonase/lactonase 3 Homo Sapiens
PON1serum paraoxonase/arylesterase 1 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.99 16.95 5.8 5.2 5.31 4.88 8.35 9.73 10.17 8.63 48.08 10.38 11.65 10 13.28 21.25 8.47 9.29 10.92 14.03 7.63 7.25 16.62 15.6 12.02 9.97 2.58 2.6 9.68 10.42