XLOC_031936 (gene) - C. hemisphaerica

Overview
NameXLOC_031936
Unique NameXLOC_031936
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_171:106913..114622-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031936 ID=XLOC_031936|Name=XLOC_031936|organism=Clytia hemisphaerica|type=gene|length=7710bp|location=Sequence derived from alignment at scaffold_171:106913..114622- (Clytia hemisphaerica)
CTGTCATTTTGAGGAGCGAAATTCAAATTCAATACAGCAATGGTATTAAT TTGTTTCACCGACTTCTGCTTTGGACGGATCCCACTATGCACCACTACTT TTTTGTCTGAACGTTTCAAGCAAATAGATACGCTCTTTCAAGCTTTTCAG ATTTTAACAAAGCTTCTTTTGTACTTCTAAGCCTTCTAAGCCTTTTGGGC TGACTTTCCAGCGCAGCTGGTTTATTTCAAATAATTTTTGTTCAGTTTTT TATCATGCAATCATATTTTTAGAGTATTTCAATTTTTTCAAATAGTTTTT GTTCAGTTTTTTATCATGCAATCATATTTTTAAAGTATTTGATATTTGCT ACTGAAGTTCAAAGATAATTTACAACCAACCATCAGTTCTTGGTTATTTT TATTTCAGAGACCTCTTGATTTTGGATGTTACCTTGATTGGATAAATCAT AATGATGATTCTTTGGTATTTTTTTCAGTCAACCACAAAATAACACACAA AGAAAGCAAAGAATTAAATAATTATAAAATGGGAAAAGAAGACAAAGCAG TTCTCTCACACAGCGAAGGTGAAGAATCAGACAGCGAAAATGAGGTTTGT TTTTCTGCATTGTTTTTTCTATTGCTATCAACAACAAATGTCCAATGCGG TCCAATTATCTTTTTCGATTGTATAAAGATTGAAGATTAAGTGGCACTTA ACATGAAGATATTAGATAGTTTAGTAGTTTTTCTATTCCACACTTAAAGG GCCTAATGTAATAAGATCCAAAAATGTCTAAAGTGAGTAGATAGTTTGAT AGTTTTTTTTTTATTCAAGTTGCTTTTGTGTGTTGTCACATTTCTAAACT TCAACTAAGAATCGGACTTGCTTATAAACTGGAGAATTTTTTCATAAATT TGGTAAATATTTTATCTACAATAAATTAAAAATCAATATATGGCCTTTTT CAGTTCTTGGAGGAGAATGAACGTATTTTGGGTGAGGATGAACCAACCGA GAAGAGAGAATTGATCAACAACCAAGTAAGCCTTGTTTTTGTCTATTCTC AGTTTTCTTAGTGTTCTGGAATGTTGGAATGTTTGATGTGAAGAACAAAA AGCTAATGATGTAACAAGTTGGAATTTGTGTTTTAGATAGTCAAACAGTA TAAGAAGAAAATTTTCTAAATACTATTCCCCCCTGGCTTTTGGATTTTTC TCTCTCCTCTTCTTTTACCCCCCCCCCCCCCAGATTTACTCCAATTTTCT GGAAAAATTGTTTTACAATATACCTATTTATCAGTGAATTTTCAATGTAC TGTAACACACCATCATTATACTCAATGTTTTACTGTTCCTAAGGAATTGA TGAAAGTAAGACTTGAAGAATTGAAGAAAGAAATTGATTGGATTGAACGT ATGGATGTGACGGTTGACCTCTCTGATTTGCCAGGTAACTATGTTCAACT GGATGATAAACCCCCTAGGCTATATAGTTTTAAGATATTTAAGGCTGCTT AAAACTTTTTCCTGAATTGCAAAACTGCAAAGTTTTCTGTGCAAACTTAT CCCTATTAATGTGGGTCAAGTAATTCTTAGGAGTCATCTGGTGTCTATGC TATGCTGTTTGCTTTTTTCTCGATTCCCAGTTAATAGCTATATTTTGATA TTTCAAAGGTTTGAATTAAATGTCAGACCTTTTGACCTCTGCTTCGCCCG TATAGATTTGAAACATTTCCCTTTACATCAAGGTCTGAACCCGACAGATG AGACAGAGGATGAAAGCAAAAAGACAAATGGTACCAAAGAAGAAGTTGTG GATGACTTTCAACGAGAATTACAATTGTATGTACAGTTTTCTTAAAGTCC TTCAATCTCAAATTTCAACCATTAGAAGAGTTGTAGGAAGAGTTACTGTA TGAGATCGATTGTTTGAAATTACTACTTTGCTGGAGTACTCTTCAAATAA CTCCACCTAATTTATGCACCCCCAACGTTTCCCCTTTTAACGAAAAAGGA TCGGTTAATCTCCAAGCAGATTCCAATACTCCGCGCATGGCACTTATTCA TTCTAAAGGCCATGGCTCCGTAAGAGATTCTGCCCAGGTTGGTGCACTGT TTTGATCTTTTTCATGCAGTTTTGGGATTGAAAAACAATCAAAGCAAAAG CGAAATAATTGCACCAAATCAAAACCCGATCATAAATATAAACATTAGAA CCAAGTCGCTTTCGCTTTCGTTTTCAAGCAAAAGCAATGCAGTTTTGAAT GTTATGACTGAAAAACCAGGTCAGATCGTCACATTTGCCATATCCACTAA AATAGTCTTTAATCTTTAATCCTAAAACTTTCATATTCTTTTGTCAAGAA TTTGTGTTCAGTATCCTCAATTTTTTTTCAGTTATCGTCAAGCACAAGTA TCAGCGAAAGAGGCTTTAAGTAAATTAAGAGATATGGGTGTGCCTACAGA GAGACCGGAAGATTATTTTGCTGAAATGGTCAAATCTGACGCACACATGC AAAAGGTATTTTAGATTACACATTGAAAATTATTTACCAAGACCTATGGT TTCCATTAATTCAAATGCAAATTTTTTGAACGAATGCTGCAAGGTACTTT GAAGCTCTAAATAAATCATATCTCGCCATAGGCTTTAAAAGTGTACACTC CTCAGTGCCGTGATATTGGGAGGGGCTGAGGTTTAATGAGGGAAATTTTG AAAATTTACGTTCAAGATGGCCAGAAAATGCCCTCAAAATGAAATCAGAC AATATATCTTTTTTTTATTTATAGAAGTTTATTTCTCTGGTCTATTGACC TCTATGAAACAATCTTACATCTACAATTTATAGATCTTATCATTCCATTC GCTTGTCAATTTTGTTAAAGAGTTTTACAGTTAGGCACCTGGGCCTCTAA CCCACTCTTCTTACAATCATGTTGTTTCTGTCGTAAATTTCTTTAAATAG AGTTTAGTCCTAGGACTACCTCTCACTTTCCATATATGACTCTTGTCTTT TTCTTTCGATGTTTTTTCTTTTGCTTTATGATGCCATTGTTTTATTATTT CCCGTTCTTTCCTTGAAAAATCGTCTGATACTCTGAAATTATCTTTATCT AGTTTGTGGGTTGATGCATAAGTATTCTAATCCTTTCTTCTTCACTCTCG AGAGTAACCTTTAATGGTCTCCATCGTTCATTTGTATACATTTCATCTTT ACGAGCACCTATGCGTTCTACCTTGATTATCGTCACATCGAAACCCATTT GTTGTTTCAGTACTTTTTCTATAAAATCTTTGTCACCAACTCGTTACTCT TCTTCGTTTTCGTGCTTGTTTTGACCTTAATCATGCACCATGATGTTGCA CTTGGTTGATTTGAGCCAACGCTCCTCTTCGTTCACTGATTTGATGAAAC TTTTTGAGGTCATCTCTTCTTTTTGTAGATCTTCTTTGGTGACTTCTGCA TATGATTATTTTTTTGTTTCTGTGTTGTAGAGCTGTGTTTCAGATCGTTT TTTGTTCCGTTCTTTGTTGACGTCTTTTTTATTCATAAGCTTCTCGACTT TCCTTTCTAGAGAGGTTATTCTCTCGTTGAAACCTAATTTCAATCCATGA TGCATGGGTCGCGGCACCGGGGGGGCCACCCGGGCCTTGGCCCGACCACA TTTTTTCAAAGTAAAAAGAAAATTTACCAATCAAACCAAATTTTGTCTAA TAACGTTAAAACAAACCTGTTTTAGGTAATCCAGAAGGGGTAAAATTTTC GCCCGTCGGCGCCAACCATGGTGGCGCCTCCTTCGTCAGTATATCATGGT CCTATCACTTTCAAAGTGGAGCCGCGGCCCCTGTGATGTTCATCTTTATC TGCTTGTTTTAATCCTCTCGAGAGTGGCGTTAATGTAACACAATTTCCAC ATTCGAAGCGCGGGCTTTTCTATTGCAGACAAAGCTGAATCTGATAGGCC GGGAGCTCAGAGCAAGCATAATTCTCAACTTCAGTTGAGCTAGAATCTGA CAATGAATGTATGTGTGTGTGTATGTCTGTCCGAAAACTTTGGGGCAGGC TGGAGACTTCAAAAATGATCGGGTTTGGCTGAAATTTGGCACACTTGTTC CTTGGGTGAATATCTGGGGGTTTTTTTTCATTTTTTGAAAAATTTCATTT TTAAGGGCGTGGTCACGAGTTTTCGCCAAAACGAGGCTAAAACTTTGGGG CAGGCTGGAGACTTCAAAAATGATCGGATTTGGTTGAAATTTGGCACACT TGTTCCTTGAGTGAATATCTGGGGGTGTTTTTTTGATTTTTTGAAAATTT TCATTTTTAAGGGCGTGGTCACGAGTTTTCGCCAAAACGAGGCTAAAACT TTGGGGCAGGCTGGAGACTCTAAAAATGATCGGGTTTGGCTGAAATTTGG CACACTTGATACTTGGGCGAATCCCTTTGGGTGGTTTTTCATTTTTTTTA AATTTCCATTTTAAGGGCGTGGTCAAGAGTTTTTAGTTGAAATTGGTTAC AATTTTACAATTGGGCCTACGAATGATTTAAAAACACTGAAGTTGAGCCC AGTGCGGTTAGCACGTTCGACAGTGGACAAGTCTATCACATCTCCTACAT CATTATCTGCTTTGACGGTGTTTGTTAAACAGTTATTGGGTGTGCAATAT CCATAATTTTATTGAATTTCCTTGTTAGAATTTTCGTTGATTTCCGCCAT ATTGTTGCATTTTCAAGATCGTCTCAGAAACTTTATAAAAAATCTATTTC TCAAAAGAGCACTCTATTCATCGCCAGTTCAATTTCTCTTTGATTCTTTT TAGATACGACAAAAAATGTTGAGTAAAAAAGAATCTATCGAGAAATCTGA GAAGGCAAAGAAACAAAGAACACTAAAGAAATATGGAAAACAGGTAGGAT ACTCAAATTAGAATATTAATCTTGACATGAACTGTACAACTGTATTGAAA AATTGGAATATTTTTTTTAATGATATATATTTCTGTTCTCTTCTTCTTGT GTTTCTCTGCACAATTAAGAGTGCTCAATACATAAGTAGAGCTTGATATA TTTCTGTTCTCTATATTTGCTGCTTCAACCTTTTACGTTTTCTATTTCTG TTGTATTTTTAATTGTTTTTTTTGTACAGATACAACACCAAGTGCTACAA AAAAGACAACAAGATAAAAAGAAAATGCTACAGGCTGTCGATCACCTAAA AAAGAGTATGCAACACTTCAAACTTTTCAACCCTTGTCAACAGATTCTCA CATAACGAATAACGAATTTCTTCAAGACATTTCGAAATGAATTTCTCCGC AAAAAAATAAAACTTAAAGCTTTTCCTTTCAAGAGGAAGCACTCCTATCT AAATGCAAAAAAAATTTCAAAGTACATACCTGGACATATATCCGGATATA CAATCAAAATAAAATAGCCGCCTTCTTTCTCACCGTTCAACACATAATCG AAAAAATTTTCCTTCGAAAATACAAGGGAATTTTTTCCATTTAAGAGAAT ACACTAAATTTTCCTTCAAGAATACATGGAATTTCCCTACGAAAATACAA GGAATTCTCCTAGGTAAATACAGGCAGTTTTCTTACGAAAGTACAAGAAA TGTTCCTTCAAAAATAAATCGGAATTTGCCTACGAAAATTCGAGGAATTT TCCTTCAAAAATAAAGGAATTTTTTTTACAAACATAAGCCATTTCTTCAA AAATACAACGAATTTCCCTTAAAGGATAGCCGATAAACAAAGATACTTTT CAAAACAGGGAATTTCGTTTCGAAAATTACTCAGGAGAGAGGTCTATTTT AAGCAAACTCTCCTTTTGTTTGTAGACAAAGGTAAATTGGAGAAATTATC CGGCAAAGATGACATGTTCGATATTAACACTGGTGACCGTAATCAAAACA AGTGAGTAGGTTAATCGAATATTGGATTGAATTTGGTAGAGTTACATGAT CTTTTTTAGAATTTAACATGATTTCATCATGTTATAATGTTAGACTTTTA GACAACAGGGGTGTGAGAATGATAAGGAGAATTACGATTGAGTCACGGCC TTAATTTGAATGTTTTTCTGACTCTAACGATGTTTTTCATCTCATTGCCG CTTTGTTTTGTATTATTTCTCGATCTTGGCATTGTCGGACTCTCTATCAT ACAGTTTGTTTAAATTAGTTTTTGAGATTTGCCTCGCATATTTCAAAATT ATTTGATAGTGGAAGAATATTCATTCTTGACAACAAAACAGATTGCAATT CAATGTCCTGATGTGAGAAGCAAACAGGTTAAGCAATTCTTGAGAACTGA AAAATTTTAACGATTATGGACCCCTTCATTCACTCTCCTTTGTTCCTTAA AGACGTTTCAAATTGATGAATGACTGAAAAATTTTAACGATTTCGTATTT ATGTGACCTAATCTCTCTATCCCTTCCTTCTTTCAGACAATCCGGAGGTT TAAAACGAAAACGTAAAGACGATAAGTTTGGTTTTGGTGGTCAAAAGAAA AAATTCAAGAAGAATTCCGCCCAAAGCTCCGCCAACGCCATGTCTGATTT CAAACGCAATGTTCACGGCAAGAAANCAAAGCTCCGCCAACGCCATGTCT GATTTCAAACGCAATGTTCACAGCAAGAAATCTGGATCAGGGAAGCCAGT GAGTTGAAATTGTTGAATGCCTCATGGTGTCTTTAGCTTGATATGCACAA CTTTAATTCGATTAATTTTCACGAATCGGCAAAAATCAGTTGAAAAAGGC CTTGAAAACATCATATTCCGTCAAAAATTGCACATTTACAGTGATAATCC TGATAATCGCCCACGCGGACAATTACGTACGCTGTGTAACAATCCACCGA TTCTCCTGAGCTCAGAAAGAAGGCCTTGAAAACATCATATTCCTTCAAAA ATTGCAAATTTACAGTGTTTTTTTTCATGTCGCGATTTTATTGGAAACAG TCTTATCACAGATACCTTATCTAAAACGCTATTATGGACACTTACTCTGT CTTCCTCAAGCCAAGGCAAACGAAGGAAAATAATGCACCATCTCTGCTGA GTAGACCACAGTTCACAAATCATAACAAAAAAACTAGTATTGCAGGAAAA TAGGAGGCTAAAGGATGGTCTTAATTGATCAAATTGCCGACACTGAACTC GGTAAAGATAACGCATTATTTTGCTTTAGTCAGGGGCAGAGCAGCTCCAT CTAGTGTTCTCTTTAACATATCTACGGTCTGTATGTATGAACTATACAAG AAATTTCCATTCGATTTCTTTGTAGGGCGGTAAATCAAGAGGCGGTAAAC CACCACAGAAACGATTGGGAAAATCTCGTCGAAATAAAAACAAAAGTAAG AACTAACGAACGAAGCAGAAAGTAGATTTATTTGAGGTGAAGGATCGTGG ACAGTATCTTGAAAAGTCGATAACGTCGAACCACCTCAATTGAGAAATTC ACGGTATAAATATAAGTACGGTATAAATGGATGCGAAAATCAAAAATTGG ATTTGTTGGTTCCTTGGGAAATATAGCAAAGAAAATCTATCCTCTGGGTG TCAAATAGGTTTGCTAAACAAGCTTTATTCTATCATGCTATTTTATCAAG GAAATTGTTTTTGTAAACTTCATTTTTATAGGAATGAGATATTTTTATTG ATGGACAAAGAACAGACGAAAAGTTATTAGCTTTAAAATCGAAATCGACT TCCATATTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050434TCONS_00050434Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050434-proteinTCONS_00050434-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_171supercontigscaffold_171:106913..114622 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
EBNA1BP2probable rRNA-processing protein EBP2 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
50.95 51.14 16.37 12.98 79.42 61.49 67.18 64.91 52.48 44.31 45.3 46.79 54.58 63.22 50.52 51.39 44.34 49.34 15.47 17.44 54.22 50.03 59.51 53.99 68.74 72.84 20.41 23.69 29.89 37.52