XLOC_031948 (gene) - C. hemisphaerica

Overview
NameXLOC_031948
Unique NameXLOC_031948
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_172:1212..9414+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031948 ID=XLOC_031948|Name=XLOC_031948|organism=Clytia hemisphaerica|type=gene|length=8203bp|location=Sequence derived from alignment at scaffold_172:1212..9414+ (Clytia hemisphaerica)
TTCAAATCGGGGTAAATCGGGCTAATTGACGTGTTTTTAGCAATCCGATC AAAGAGCAGAAAATTTCTCACATTTTCACTTTCAAGATGTCTGACGATGG AGTTGAAGCCAGGGTCCAGGGCTTCCTCCACAAGAAGTTTCCAGGTATTG ACGAAGATCTCCTAAACTATGTTGTAGGTAAGCACTTGAATATTTCCTAA TAATAGAATTCAAACATATAGTAGGTACGGTCTTGTCTGGCTGTAAGTTT TTATGTCATATATCCAGACGAtgttagcaactccagaagatttttcaagt tttaatttttttttcaaaatctatcctatcttgaagagctttgaaaaaga aagaaaatgagtggtcataggcctccagaggattaggggttgtaaagata ttcaaattttagtgtaaaaaatttgactaaaaatgtcaaaaaaaaggtta ggaaaatagcttggaaaaattcgaaaaaNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTCttgcattttcaaatatt tatttgcTTACGCTCAAAGTTACGCAAAAAGGACAAAATACAaccaatgg gccattccagaaaattttcatTACCCCTGTCAGACAAcgtacattttcaa attttttccagcCTCAGAAATATTTTGTTTCCAGTCGTGGTTggaaattc cgatgaaaattcatgtacttttgcaaaatgtgTTGGGGAGGAAATTCCAC TATTTTTTACCGTTTttattcaattgccttggaaattcatacattttctt ccctcgccttggaaattttgaattttggtgaaaacttttgccctcggaaa ttcCGTGTTGTCcaccccctgttacagacattCTGGAATGACCCAATAAC ATCACATCAGggccagtatggattccacgaagatatttttccgtacagca agcctcatgccaagcaaaatttcttttgtaccaacatttaATTTTacaat aagggtgcaagatgggaaaagaggcgcataAATTGACACGAGCGTAAGCg agcgaaagcaaatttagccaaatgaaaGCTAANGCGCCAACATGATTAAT AAATTGACACGAGCGTAAGCgagcgaaagcaaatttagccaaatgaaagc taaaaatcgctggattatggagtcattcacgccgagctggaattattact ttacgccaactgaaaatcaaacaatctttgtaagtacccttacgccaatg cgccaaaaacgtttcagttgtacgccgaagatcTTCAGCGTTAGTTACAC AAAATCCATACTGGCATCAGGAAGATGATTgattaatgataaaaaaagta aaatattatacgtttttgtaattttcccaTCAAatcactttttgaaattt ttcttaggGGGCTAGCCCCCTTAGAACCCCCAACTCAATATTGCGCTCAC TTTGCTCGCACCTTATCCcacattcaatattttcaagACTTGGCAACTAc cttaagttggtctaatgtcgacatccctcttctaattttgttactcttct ttagagataggaataataaaaaggtcggaatcactgattgaaactaattt tctttgagTCCATAAGTGATTCCAAGTTTCCTATTATTTCTATCTTTAAA GAAgaatgtcgaaattagaagagggatgttgacattagaccaacttacag tatgcagtttttgtgattttttttatatgacAAAAAAGAATTGTCATGTT GCCTAATCACAAAAATCTCCAATCACTGctgccatcttgtttcactttaa atgtggtgttttaaaattcctcaGCTACATATTTTTTACGGAAAAGGTTT TTTCCAGGTTCTTTTAATCCCGAGAACTAAGTGAGAGTGCATAGTGGGCA GAGGGGTATCAAGCCCCCCCCCTTCAAAATGGCAATTCCCTCTTTTAGCT CAACCCCCTCTTAAGAATGAAAATTCCTTGACCCCCCCCCCACCCCCTCT TTTTTCGACCTTTTATGAAACCTTTTACAAACTGTTACAAAAGCAGCTGT CTTGCAAAGGTTGAAAAAGCAACATACTCCATCAAGAGTTTTTGCTTCAT TCAAATGAATGGAAATATAATAATTGTTGAGAAATCTCAAAATGAATCTT TTGCAAATTGCCAAATCTTCCAAGCCCCCCTTAAAAATTAACCCCCCTCT TTTTGTCCAAGCCACCCCTTTTATTTGAAATTTTCACAAGCTTCTCTTCT TTTAAATTCAGTAAAATTCTCAAACCCCCTTTTTTCAAGGGGGTGCCCAC TATGGAGTGGTTCCTCTTGCTTATTTTCCTTTCCACATTGAGCCAGAGTT TCTGAATATGAATTCTGAATAGAAGAAAACCTAAGAATAAAGCAACAGTA TTCTGCTAATTAAAACCTAAATATTTCCAGGGAGTTTTATTAATTTTGTA TTACAATGATTAAAAAGCCTATATAAAGCACCAAGAAAAAAACCCAACAT AGAGAATTTTCGTAATACCTTGAATCATCAGAAATTTTGCCTTCTCAAAG CAAAACAACAAAAATCAATCTCACTAAAGCAAAACATTGTGCCTACAGGA TTTGGTTATTTCACATTTAAAATATCCAAGTCAGAAAAATCTTTAAAATG ATAAAATTTGCAAAAAAACGAGGTTCTTTAGGTAATAGATCAATTGCTCT GTGTGTTGAAGCAGTTGACTAAGAAATGATTTTTTAATTATTTGTGATTG TTAATGTTATAAAGATTGTTTTCTCCAAAAATGAAAATGTTCCTTGGCTT GAAGAATATTTCTGAAAATCAGTGATTTGTAGGGTGTGGGGTAACAAATC TATAGTTTCTGTAACTACCTATCATTCCCTTTTTTGTAGACTAGTAATAT ATACCCCGTTTTAACATTTTGGTGTGATAGAGTATGTTTCTTTAAAGAAA CAGGTTTGATACTCCTTCAAATCGGTCTCAACCATTCTCAGCTTTGTGTT TCATATTTAAGTCCATGATTATATTTGTCATCATTGTTTTAGATGTCACC AAGACAAGTGCTGAAGATTTTGAAGATGCAGAGGAAATATATGACGCAGT TGGTGGGGTTCTTCACGAAGCTACAGAAAATGACGATGAAGATGAGATCA AAGAAATCTGCAATGGGATTATGAACCTTATCAAAGGGTAAGACAATACA AAAATCTTATCTATATTATCTCAGATTATCTATATCTTATATATGATCTG ATctgatttttaaacttttacatCACTTTTGTGGGCTTGTAAGTTTGATT AGAAAATTCTGAGCTTACCTTATTTCCTCACTGTGGTCTACATAGATTGA TCAGAGAAAAGAAAGATGAGAATGCAAAAATATGTTAGCTTATCAGTATC TCATGGTAAATGCAGGAATTTTCTCAATGAAAATTTGTATAAGATAGGAA AATATATAAGGTTTTGTGCaaggaaaatatcaaattagatCAATTACAGT GTAACCAAATGTTTTTCTCTACTTTCCTTAAGGTGTATATTGTACATTCT CTTTGAAGAAATTTATTATTgttccctattgttatattttgctgaataaa caaaaaattattttttcctctttctgaccaatcttgctccactttcgtgt caattcaatgtgaaaaagcttgtaaattaaagtCGATAAGAAAACAAACT ATATcaatcttatttaaaaacaaaacctttaaagatcTCTAAGAAAAACG CCAAATAATGTATTCTTCAAGGAAAGTACATGATTTAACTTATTATTCAA GGACAATTTGGAAGAACATAAGGAAAATATAGAATAACATCATTCTCAAG AAAAGTGAAGAATAGCGTATTCTTTAAGGAAAATAAAGGATAGTGTAttc tataaataaaataaaataaaaatgataaaaaatcaactagtttgagtaaa gaaaacgatttaagttaattttatactcaaagtttcatgccatcataaaa ttaacttaaatcgttttctttactgAAACTAGTATAAAGCTCTGTTATCA TTAACATTGAGCACTGTTATTGGTTTTGGCTAACACAAAGGATAAAAGAA TCAAGTAAAATGTGACTTctcaagcgatttggagtacacaaAAGACCGAT CGGCCCAAAGCGGGTAAAATACCGGTCTTAAAGCGGCCGaagtaaaatct ttttgctTATTGTTCGTGAAGATCGGCCTCCAAGCGGGCGAGAGAATTTT TGAAAGGTCCACTGTAGGCCACTCTTTTAGCGGCCCTTTTTGAGCAAGAG ACTTCCAAGCGGCATCTGGAGCGGTCGAAAGTCCGGTCCAAAAAAAGTCT GGTTCTAAAAAACTACTCAATCCCCAAAAGtacaatctttttcaaaaagt agaaTTGAGGAGACGTCAATAACGTTTagcattttaaaatctttcgaTAT GAGCCATATAATATGATTAAGATATGTTGAAAAAGTGTATCGATAGTAAA ATTATCTATCTTGTATCGATAAGGAAGAGACGCTCGTGaaaattacgaag aaagcgtattgataaaactaagcataaaAGACACCCGTGaaaattacgaa gaaagcgagttgataaaactaGGCATAAGAGACGATCGTGAGAATTACGG AGGgagcgagttgataaaactaagcataaCAGACACATTTAAACgctaca aaaaaatcaaattcagaaAATTAAGCATGAGAGATGCTTGTGAAAGCAAT GTAGGAAACGAGTTTTATATTTGTTGACTATTCTTGTTAAAACatacaaa gaaaaacaagttgGTTAAAGTATGCATAAGAAACTCTAGTGAAATTTATG AAGAAAACAACTATGCTTTTGTTGCAAATAGAAATAGATCAGCTCAATAA AAGTTCTGGCTAAGAGAAAAATGAGACTAAGTAAAAGTAAGTATATAAGT ATATAAGTAAAGAAATCAATAGCGGCCATCGGGACGAAGCGTACCGGGCA TTGGACCGCTCGGGCCCCTTTAGCGGCCTCAAAGTCTCTTTGTTATGGCC GCTTTTCATGATCGGCCATGCAACGGCCTCTTTCGATATTTGAACGGCCT TAGCGGTAAAAAGACCAGTCCAATAGAGGCTATAGAGGAACGGTCATTAG ACCGATCGGACTTttgtgtactccaaatcgcttggggagtcacaaatGTG GTGCAACctattctttaaagaaaattattggtcaatgtattcttcaagga aaatgtTGGATAATTTATTCTTCAAGGAATTTTCAGGATTGCAATATTCT TTAGGATCACAATATTCTTTAGGATCATGCAGGGCAAGGTGTTCTTTAAG GATAATTAAGGATAACACATTCTTCAAGGAAAAGCGAGGGTAGTGTATTC TTTAAGGAAAATATACCATAATGTATTCTTTAATGAAAATATAGGTCAAC GTATTCTTTAAGGAAAATCTAGGGCAATGTATTCTTTAAGGAAAATCTAG GTCAATGTATTCTTTAAGGAAAATATAGGTCAacgtattttttaaggaaa atataGGTCAAcgtattcttcaaggaaaatcTAGGTCAAcgtattcttca aggaaaatcTAGGTCAAcgtattcttcaaggaaaatcTAGGGCAATGTAT TCTTTAAGGAAAATCTAGTGCAATATATTCTTTAAGGAAAATCTAGGGCA ATGTATTCTTTAAGGAAATTAAAGATCATTGTATTCTTCAAGGAAAGTGT GGGATAatttattttccaaggaaaattgaGGGTAGTGtattctttaaccc tttgagtgccagggtccttttttctaagttttttttaaaaaatcgctagt tcaaactttaagggcttatatctcctgatctagaaggcattagaagctcg tatatagctcgttggatagcttagagtctcttctttNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGGCGTAT TGTTTAAAGAAAGTATAGGTCAACGTATTCTTTAAGGATTATTTGGACAa tgtattttttaaggaaaatctaGGAATGTAATTGTCACGGATAATGTTAG ATAGATCAAGcattcttccaaaaaaatacatgatgaaatattttttgggg aaaatttaggTTAAAgtattcttcaaggaaaattaTCTCTTCTTGGATAA TGTTTTACAAAGGCTGACGCATATCCTTGGTTGGTAGTTTAGAATGGttt gcaaaatttttgtttcatacaCTTCAAGTTCCAAAGATTACACACATCTT TATCCTAATGTTTTCAACGTAAATAGCTCCGAGCTTTCATCAAACACTTT TGGTGGAGAGAAGAATTAGAATTGATAAAATGTGTATATAATGTATAATA TGTATACAAACATCACACATTTTCCTTAGTGGTGAGGAGGAGAAACCACA ACAACAAGTTAATGGGAAGCGAATTCTGGATGCACCAATCCACATAGGAG ATCGAGCAAAGAAAGATGATGAACATCAAGTTGAACAGAATAGTATATGG ATGAAACAAAATGTAGAAGATACTACCCTGGTAAATTTCGCTctcaatat tttatcaaaatacttTGAGTTTCTCTCATCCCTCTCATTTTATAGCAAGC ATCTTTATATTTCTTAATATCTTCATATTTTAGCTTCAACACAAGATGTA TATAAACATTCTGGAAATACCCATGTACATTTTGCTCTCAGCACCATATT TTAATTCTTCAAAATCTTCCTTTCATAGAAAACAGTCGATTTGAAGAAAC TGGAAAGAGCAGAGGCTAAAcagaaacaaaaacttgagAGACGTGACAAA GACGATAAGGATGACGAATCTTCCGCTGGACCCACAACCAACCAAGTCAT CCAAAAGAAGGATATGAAACAAGAACTATTAGGAGGGAAAgttgttgata tacgaattgaaaattttgatcttGCATATGGCAGTAAAGTATTACTTCAA AACTGTAATTTGGTCATGGCCTTTGGTCGAAGATACGGTTTTGTGGGTCG AAATGGAATGGGAAAGACTACATTGTTAAGGGCTATTTCGAAACGTGAAT TGTATATTCCGTCACATGTCACAGTACTTCATGTAGAGCAAGAAGTTGTG GGGGATGAAACGCTTGCAACTGACAGCGTACTTGAGGCCGACACTGTCAg gta
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050446TCONS_00050446Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050446-proteinTCONS_00050446-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_172supercontigscaffold_172:1212..9414 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
97.58 96.21 60.92 52.93 100.97 80.99 126.84 133.99 123.1 104.32 174.55 186.86 200.54 229 135.43 140.82 100.08 117.91 104.44 102.47 119.04 117.8 78.05 87.38 172.93 180.73 70.04 93.89 64.41 70.05