XLOC_031977 (gene) - C. hemisphaerica

Overview
NameXLOC_031977
Unique NameXLOC_031977
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_176:15878..19245+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_031977 ID=XLOC_031977|Name=XLOC_031977|organism=Clytia hemisphaerica|type=gene|length=3368bp|location=Sequence derived from alignment at scaffold_176:15878..19245+ (Clytia hemisphaerica)
GAAACATACATTCATCATTTTATGTTGTAGgaagttttaaaaattctcaA
CGACCTCAACATCCCTTTTCTCATTTTTGGGTGTTGAATAATGGACTGAA
ACTTGACTATGAGGATTGATTTTCCCCTTGTTTTAATGCTGGCTGGGGTT
TTGTGTTTCATTgcttttaagtcagaaaatttggGGAAACTTTAGTCGGG
ATGGAAAAACTAGCACAGTATCTGGCAGtgaggatttttttatttgatta
tttccaGCGAGGGGACAGAAAATTggagtttaatttttcaatggGGACAA
TATTTTAGCCAATTATTTCAGGGCTGTGAGACTAAAGAGGTATTTCTTTG
TCAGATACTATGTAAGATATATATCTGTCCAAGACTGCTTTTCTTTTGTA
CCAAGAATTTGCTTCTAAAATCACCAACACGAGAATATATTTTCCACTTT
GATTAAATATAATGAGACAACTACAATCCTGGACAGAACTGTTTGTccac
ccccctccccccaataTCAGTGTTGATGTTGAGTCTTGTGAAGgtgcaaa
aattcaactccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNaaaaattcaactccaacattgattttggggggagagggg
ggactTGTCGGTAGAAATAAGTTATTGGACATCAGTTTTGACCACGATTG
TACCTCTTTTGATATCTGACTAAAGGTCACAACCACATGTTTTGATGTCA
TTAAAAGAGTattacagaaaaattttccttgttGTTTCTCAAGATAATCT
CATGTTTTCGTACCATAAAATTAACGTCAAGTAGCTGGCTTATCTTTTCC
ACGTGGAAATTATGTTTATATAGAAATTGATAAATAAATTATAATTAATA
GACATGTGGGCTCAAACCAATTATTCGGTAATTAAAATTGGATTAAATCT
TAAGTTTTAAGCAACACGCCTCTGTAAGTCTAAAAAGTATAAATAGCTAA
AGAAGAGCATAaggtttatttcatttttcagctCGTTGATTCTGAGGAAA
TTTTAAGATGAAGGTAAGAATATTCATAATTATACGAGACACATTATCGA
TAAACATGCCgctcaatttttttgcctgtgaGTCGAAGGGTTATCTTTTC
CTTTTCAAGAACTTTGAACATCTTCTTTGACCTTCCAACGACGCTGTATA
GTAAAGCGGTTTATGCGTATGATAAAACTACTGAAAACTACTTGGCATAC
CAATGTCAATTCATTAGAATACGAATAATTATAGTCTCTTTTCACTTTAG
ACTCTTCTGTTCTTCCTGTTCCTTGCTACTCTTGCAACTTATGCTTGTGC
TTCAAAGCATCCTAAAGGATCCGATGACGACGTCGACTTTGGGGAAGACT
CCATATCCTCATTGCTGCGAAACGAAATCTTGAATAGGTAATTTCTTGGA
GATTCTCTTGCGATTAAGTAATTAAAACATAATATTTCTTACAAcctaaa
aagttcaatttttttttaaagttcttaAAGTCATGAACTTTAAAGCTGCT
ATCATTTTTATGTAGTGATGAGGAAAACGAAGATAACGATGATAATGAGA
TTGAAGACAATGAAGACTTTGAAGACGAGGAACTTTTACAGAAGAACATA
ATGCAAAAAGATCCATTTCTTTTTTCTGgaagaagacgaagaagaagaag
atgtgCGAGTCCTGCTAAAAAAAGTAAGTTTcgattttaatggttttttt
ataaaaactccCCTTCTGATAATGCAAATAATCGATTGCTGAACGCCGGT
ATGTGCCGTCAAAAAATGGCTTTCAGAATCGGACAATGCagcccttgagc
agtgaaaaggtaaccttacagtgtattttaccaaagacccttacagtgta
gtttgatttgatttcttatttttctgGAGCCACTTGAAAATGTACCTGAG
AGTCGACACAATTtcgcaaaacaaatcaaaatgggagTGAGTCAAAACTA
TAATGATACATTAGATCtttactgtcagacttgcaattcagcagtcccca
aacacacccttacagtgtattctgctaaaagaagacccttgtagtgcact
ctttcaaaagtacacccttacaatgTATTTagagggtctcgaaaaacctc
cccttaagggccgcacatGTCGTGGGTCGGACCATACGAGTGCCCCTCCC
CAGGGTTTTTTCGCCGCTCCAAAAAGAAAAGATCTGATTTGTTCGAAACA
GTTGCATCAGTTCTGTTTTAAGGACTATTATGATCTTTTGTTGTATAATG
CATACAACAAAAGATTTTAATAGTCCATAAAACAGAATTGATACTAATAG
ACAAAACATAGATTCTATCGTTTTGCGTTTAGAATGCCATGTGGAAACCA
ATGGCTGTGGATCGggcattttcacaaaaattccaTACACTTACAAGAAA
TTGTTGACTCCTGCATGCCACAAACACGATGTCTGTTATAGCTGTGTAAG
TCAATGATATATTTGATACTTTTTTGGCAAattcgaacccagtcccttag
tttACTTTTTATGATCCCGATAGCAGTAACGAAAGGTTGTGTTACACGTC
CATcggtaaaatcaaaaagtgatgCAGGTGGCTCTGGGTAAtaaattgac
tttttttctgCTTTGAGAATAGAGAGCTTGCAAGAACATATTTTTCGACG
AAACTTGTGCTCTACTTTTGCAACGAAATTTATAATCTCAGCTTGTATCC
GATTTGAAAGTTACACTGCGCACTTAAATTAAGAATGGTAAATATCTACA
AGAATTGTCaacaatttcaataattttcacGTAACACTTTTTTGTTAATT
CCAGGGCAAAAAATATGGTTGGTCACAAAAACCTTGTGATGTTCGGTTCA
AAAGTGACATGTATCGATTATGCAGGTGCAAGTTAACAGGATGGAGGGTT
GTTCTTCTACCGAATTGCTATAAAAGAGCATTACAAATGTACAGCATTGT
GCGTCTCCTCGGAAAGAACTTTTACAACAATGTTGCTTCGGATTGGTGCA
AAAGCTGTGTGATTCCATATGGAAGCCCTAATTATACtgtttgaattatt
ttcatcttttgatgaCCTCAGCTAAATTTCGATTAAATATAGACTATATT
TTTTGCTGTTGGCAATGTTAACGGACTTAAAGGATGGGCTTGAAGGACTT
AATGTAAAACACGCACGAACCCAACAAACTTTAACACGAACTATTTCTGC
TGTAGCCAAAGCAAAGTCATTTTGCATTTGAATGATACTTCgtcactttg
aaaattttttaatctaCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050496TCONS_00050496Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00050496-proteinTCONS_00050496-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_176supercontigscaffold_176:15878..19245 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.04	0	0	0	0.04	0	0	0	0	0.02	1.52	3.22	0.06	0	3.19	4.41	35.14	51.76	3.01	2.56	1.37	1.32	1.28	1.41	0	0	0	0