XLOC_032117 (gene) - C. hemisphaerica

Overview
NameXLOC_032117
Unique NameXLOC_032117
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_183:11399..15525+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032117 ID=XLOC_032117|Name=XLOC_032117|organism=Clytia hemisphaerica|type=gene|length=4127bp|location=Sequence derived from alignment at scaffold_183:11399..15525+ (Clytia hemisphaerica)
ATTTTCGCGGGTACTAAATATTCACAAATTGCGAATTTTCATgaggtcgt
ggcttcttcgtaaagacgaaagacagatctggacttatttcgtactttcc
agtctcctgttcgtagtttttctgactttctggttctgtgtgagttattt
actatgttttctaacttactgaatgacttaccgacagatcgccaccggtg
ggattcgaacccactaaatgcaaagttccgatgaatttgaaacccaatgc
cttatccactgcgccacggattcatgccgaaAGAGCGTTTCTgatggcta
tttatattgtataaactgcagaccagactgtattaagagaaaatcacaaa
agagtgcttttttcgaactccaaccctaaccctaactgataataacccaa
ttcctagccaatctgatacgtaaccacacccaaaccacacccaaacccaa
ccctaccaggtcgtctgcaggtcctgacactattcccgcataccggatcc
gaaaaatagatacatgtctttcgtctttacgaagaagcttTCACCTTTTC
ATGATGACCACTCTCTGGAATTTTTCGCGTTTCACTAAATTGgttatttt
tcaagaaaaggtTCAAAACAATACCTGACGGTCGCAGTACCAAAAGAAGG
TCTAAGTAGGAAATAAAGAGAAAAGCGACTTTGCTgtatataaatttaaa
atttatttcctAAAGAAAAAgtaactgaaaataattttaccCATACATTA
TTAAATTAAAATCATTTCCACTTTCAATTCAATTTAGACCAAATTAGCTA
ATAAATGAGGACTAGGTTGGTTAAAGAAAGGTATAAAATATATACTTTAg
caataaatcaaaataaagtgaaaataatAGCGACGACGAcagacgaaaaa
tgtaataggtgAGTGagtttcgaccaatcaaatctcGTATTTAGACTAGC
CTGTTACAATTTTCgcccgtcgtcgtgattatcctggtaaaATCTCAATA
ATATAGAAACTTTTGGACGGGTGTATCACACTTGATGCACTTTCGTTGAG
GAATGATCTCTCgttatttcaaaccaaaacTTAGATGTTGCCCCAGGAAT
GAGAAAGGGTGAGAAAGTTTAGCTATCCAATGGTATAATTGGGGCGATAG
CTTCGGGTGTAGACCTCTGTCAAAAATGGTGTGTAAAGGACCGATTCTTT
TTATTCGCTTCATACAGTATCTGAGGTAAGACTCGactttaattgaaaaa
aataattggaaatcaaaattaattagTTATGCTTTGTAAGATATGCATAG
TGTGCACCCAAAATAGTGGGGTGGGGTGGAGGGTTGGTGTTTTGGGTCGA
AACCAGgtgggatttggaaattttcaggttttaggtGGGAAAAACAAGTT
AGGGTGGGGATTAATTTCTTTGGGtgggatttttggtgttttggtaaaag
ttaatgttaattttttcttatttccaatttaattttaattttttcaaaat
tttatattatataaataattcttttactatactaaacttttctcctttta
aTTATTAAGCCTTAAACAGTAAGAATTTTTGTTTCGTACCTCGAATTAGT
ATAATTTTTCGTGGGGATGGCATTTTAGGGTGTGACCTGGATTTTTAGGT
GTGACCTGGAACAcccttgcacactatgataTGAAGAAAGtaacgagggg
taaatcactcgaatAATTTTGTTCAAGATTTTGATTATTGACTtactttt
gatttctgatttatttctgatttatttctgatttattatTGATTTATTAT
TGATTTATTATTGACTTATGATTAAATTTTGATTTATTTTTTTTTTAGGA
TTTTTTTATTTATCAATCATATTTATATTCATGTTGCTAGGGTGAAAAAT
GAAGACAATGAAAAGTTTTGTTTTATTGTTTTACATGGTGGTCGTTCAAT
CATGTAACAAGAAATGGGTGACGGAAGGGATAGATGACTTTCATCCTACT
TTAAGGGCAGAAACTTTCGCGGGCAGAAACTTTCGCGTTTTTGGCATTTT
TTCGCGAAAGTTTCTGCCAGGTAAAGAATTAAACAAGAAATTGGCGAAAG
TTAATTTCGCGAAAAATGAAATTTTCCTAAAATCGCGAAAGTTTTTTCCA
AGTTTTAAAAGCCGAAAAATCGAAATAAACATAGGTAACCAGTATTTACT
GCCAATCGCAGATATATCTCCGGAGGAATTTGAATTATTATGCGGAATGA
GAGTCGATATTACCGCCGAATATAGCAGTGACGAGGATTTGGAATTGGAG
GAAGAAGTGtaaatagtttatttttcatttattagcatatcactctttca
attgaagaaaaaaatgagatttaaaataattctttattcactttccctag
ccattcgcgaaagttattgctactaaaattgaacattcacaaaaaaccgc
gaaagtttcttccgtaaattttcttcaaaaagtaaaaatcgcgaaactta
aatccgcgaaatttcgcgacttttcggtTTCTgtccgcgaaagtttctgc
ccttaaagtagtaACATCGACCGGCCGGATTGCCAGTTCTTCAgagattt
aatttatttttagatttttgattaaatttggatttattttttatatttga
tttacgatttactttttaatttatcaattaattaatttatttatCAATCA
TATTTATATTCATGTTGTTAGGGTGAAAAATGAAGACaatgaaaagtttt
gtttaATTGTTTTACATGGTGATCGTTCacttcgattacgttcaatcATG
TAACAAGAAATTGGTGACGGAAGGGATAGATGACTTTCATCCTAGCAACA
TCAGCCTGCCGGATTGCTAATGGTTCAgagatttaatttatttttgatta
aattttgatttattttttatatttgatttacaatttattttcgatttatg
atttactttttaatttatcaattaattaatttatttaCCAATCATATTTA
TCAATCATATTTATATTCATGTTGTTAGGGTGAAAAATGAAGACaatgaa
aagttttgttttattgttttacaTGGTGGTCGTTCacttcgattacgttc
aatcATGTAACAAGAATGGGTGACGGAAGGGGTAGATGACTTTCATCCTA
GCAACATCAGCCTGTCGGATCCATGGAAAACTCTTTGTTGACAGGGAATG
TAGATCgtttaatgattgttttttctAACAAGACATCATATGTCACAATT
CCTGTATATTCACCCTTAATTCACGCAGCGGCCAATGTGAAATAGAAGAT
GGATGGTCCGGATCAGGAGAAGCGAAATACAAATGCAAATGTTACAAAGC
TGACGAAAGCGCTGGATTCAACAACGTTACACCCTCATGCATCAAAAGGA
CTGATGGGAAGGAATTGATAAATGTATTGGAAAATATGCCACATAATAAC
AATACTAacaaacaaacgattttcttttTGGCTGATGGGTTCGGAGTAAT
CAAGCAAGCTCAAAGAATGTGGGAACGAAAAGAAAGCGATCTCGTGGATT
TATGGAGTTTATGGAAACCTTGGACTTTTCATGATGATGAGAAGTTGTGC
AAGAAATGTAAGGTCGATCTTTAATCtattaaaaattattattaCGTTAT
TAGTTATTTAATCTATTAATAGTAAAACTCTTTCAATAACAACAGGTTCA
gggaaaaatgaagatattaattacattcgaaagaGCAGATGGATGGTCCG
GATCAGGAGAAGCGAAATACAAATGCAAATGTTACAAAGCTGACAACAGC
ACTGGATTCAACAACGTTTGAAAATCTCTAAAGCTGACAAAATGATGTCA
CTTAAGTTGataatgatgtaatgataatggTGCACATAATTCATGATATC
CATGACGTGATGTTTTGTACGGAAAGatcccggtttttgccagtagtgac
aactttaaactagacaaaagttaagtataaaatttgccactactggcaaa
aaccggggtctttccttAGAAAACATCACGTCGTGAACATCATGAATACG
AACAAAGACGTACATTCTTGCAACCTAATTGAACAATGgaactctattgt
tccaaggtatGATTTAATTACCAATGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00050688TCONS_00050688Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_183supercontigscaffold_183:11399..15525 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.73	0.7	0.53	1.04	2.88	2.17	3.51	3.85	1.88	2.56	2.2	1.73	2.51	2.05	1.87	2.04	1.76	1.72	1.62	1.37	1.78	1.84	0.91	1.1	2.76	4.12	1.32	0.7	1.63	1.05