XLOC_032564 (gene) - C. hemisphaerica

Overview
NameXLOC_032564
Unique NameXLOC_032564
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_201:464292..468700+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_032564 ID=XLOC_032564|Name=XLOC_032564|organism=Clytia hemisphaerica|type=gene|length=4409bp|location=Sequence derived from alignment at scaffold_201:464292..468700+ (Clytia hemisphaerica)
ATGATTATTACCCAAAACTTATGAAAGTAACTCCATGGTTTTAGTTGAGT
ATTTTGGCCAGTAAATTGAGATCAGCTAATAGGTTTTTGTTTTactcatt
ctagatttttgaatataaaatttatgaaattaacAGATAGAAACGTGACA
AAATACTTTAATTACACTAGGTAAATACTACAGTTCATCTAAgctaatat
tttcaaaaatagtgGTTTCTGAATTAATTCGGTATAGTTCCTCAAGACCA
TGTTTagattgaatgaaaatttctttgactTCATTCATTGCCATTTTTCT
TGCTTCCCTGTTTGCTGCACGCTTCAAAACAAGGTCAAGTTCAACTTCAT
TCAGCTTGCAAACTTTTATTGTATAGCCTTTCCTTTTTAAACGTATCATA
TAATCTATCAGTTCCTCATATTGTACACACGTTCCCTCTGCCACAAAACT
AAGTTGGTTCTCAAGAAGCCAGTCTGTTAAGATGATTGCAATCTGACGTG
CTCTTGgataaaatttatttacttCCATTTTACTAAATCCTGGTAGCTGC
TCCATGATTTCATCAGTGTCAACATATGCATATTTTCCATAGGTTTTGTG
GGgaagaattttgttttgaataaaggTAGTCTTGCCTGATCCCATGGGAC
CTAACACAAATAAAGCATCTTTATAGTATTGAATGGAACCTGACCTTCTG
TAAAATGtcttatatttttcaatgagTTGGTTATTGTCTTTTTGCAATGG
ACACATTTCTTTTGATGAATAGAATCGTTTATGAATGTAGTGGTTTCTAC
TTAAACATTTGTTATTGGTGGGTCTATATGCAGCTTCACATCTCAAGTTT
CTTTTTTGAACCATACAAACAACAGCAAAGTTGAACACATAAAATAGTTT
TGGTTGATTAGTTGAAGCAACATGATTAGCACATAACAACAAAGCTGGAA
GTTGAATTCTTTGAAAACCTCTATTAAAACTGGATGAGAGAATTGGAGCA
AGGAGAACCATAGGTGTGATTCCTTTGTTATTCAGTTTACTGTTAAATTT
CAGAagaatttgaatcaaaatttcTATGAATGAAAAATTAGAACATAAAA
TATTCATAACATGTATaataaaaggaaagaaatttgtATGTATTCATCAG
TAGCAGCTCAAATTAAAAGGCAAATCAAAGCTTATACATAAGTAATAggt
gaaatcaaagaaaactaTCTAATAAACATTTCTAATAATGGtaataaaaa
tgaataattCACTTTCTCATCATTTCGTTCGTTGGTGTTGGTGCTAAAAA
AAGAGCTTATGCTTTGAAGCCTCAGTCTCAGAACCTCTGGAGACATAGAT
AAAATTGACAACTTCAAAGTAATTAATagggaaaaataaatacaaaccCC
TTGAAAGCTACACTAGACGAATCTTGTCTGACTTGATGCTGGTTTCCAGT
AGGTACTGCAAGTGCAGGTCCGCAAGTGCAAGTGCAAATGCAAATGCAAA
TCATCTTTCTCAAATCCGATTTTGAATCCGACAATTACAAACAATTCGTA
ATCGGGAAAACGGAATACgaaaataacaacaaatatGGCGGCATGATGAG
GTGAAAGTTTCGAAAATTCAAATCGAGAATGAGCCTTTTATGGACAGTTT
TGGTATATTGCTTGAAGGTTTTACCGACAGCCTTATGTGCTTATGCTAGT
GATTTATCATTGATTCATGGGCCTCCAAAATTTATGCAAAAGTTTCagtt
ttcaaaggcaattttaGATAATGTTTTGGGTCATGGTTTGGTAGCGTTTT
TTTTGTGGCTTGCTGTTCTTGATTACAATTTATCAAACCGATGGCATTGT
TTTGAATGTTTCCTTAGCTTTTTCATTGGTTCTGTAATAGACATCGATCA
TTTTATTATGGCTAGGTCTTTGAATTTGCATGTAAGTATATATTATAATG
ATATAAAAAGTTCGTCCgtaaaaaatttcgtcactttcaccAACTACTAC
CCTTCCCTTTGccaccgacgggggtgctccgctgaggttcgaaaaatgga
ccctacgtgggactcgttttttctaaaattttgccgaattttgcgaaaaa
agtgacccggAATGGGACTGtaagtccaaaattttctcaaattttctact
ttttcccaaaattctccaaaaaaggcactctacatgagggactgattttt
ctattttggtgtttttgcgaccctacctccTGGGACTCGTGGTGGGGTTA
AAAAAGGTACActgaccagcggcgcatccccgtaacccattttgccctag
taccacCACCAAGGTgggctatgtttctagaatttagccaggggctattt
tccttagccccccccccctaaaaaatGTTGGAGGCTGGActcctctgcac
actatgtaaatcgattgttttctgaaaacaatggaaagacaatacttcgc
tctccaccgtttatCGATGTtaatccagagtctctataataaatccatag
AAGTAGTAAATTCCATCACCAGTTATTTGGCACCTGGGAGTACTGTGGTT
TACTATGTAgtgtactttaatcgtagaaattttagcgagactaattttag
cgtatattagcgagtcaggaaaatcttgattttttttggatttattttag
cgaatcacgatttcaaaaaattacgcgtggataaattttagcggatagat
tttagcgatctgttagactggagtcgtttataatgcatgtaatactaata
ataccaatactactaataataatacgggatttagtttgtataaacgactg
gaagaatccggtgttcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaacttgcgtagcgagaa
aacaatttatcaagcaacaacaaactctcaaaacgaaatcaactcaaatg
aaaaactttcaatacacaaatccacacaaattttttttctcgagaattat
tttgagcaggaaaaaattataatcgcaaatattgacacttttcttttgtt
tggagttagtgcgcaaaggtttctagacgactaaaattgttccattcatt
actttttgctttatttctactatgtatagattagtcgtctagcttgctag
actagcgatctgtcgattcggcgtgttttagcggatttattttagcgaaa
atagagAAAACTccctaaaacgctaaaattagtctcgctaaaatttctac
gattaaagtatgtgACGTTTCTCATTCCTCtgcggcaatgaattttgaaa
taagccgggtctgtgtacagatcAACTGTAGTTGTTGCCACTGCTTTTTT
CTGTATTGGAGGAATCCAGGAAACGTCTTTGATAATAAtaagtagtaagt
aagtatgttcatctggtggctgtcggcggagccgggagtgagggagtcta
tccccttttctatttgcgctagacctgggagatcgaatgctgaggtggag
cgccacacctactctcagctcccagtaacttaccgcctagatcagattac
ccaatctaagctactcattcgctgagttggcggtgaccggggatcgaacc
cacaacccttagattgtaaggcgaatgctctaccgactgagctacccggc
cacAAAAATAGATAATAATAAGAGTTGAGTTAAAGCCAGTGATATTCCCT
TTTCGGAAAGACCATACTGTAATAGctgttttccaatttttttcagaaCG
CATTGAATTTATCAAGTCGCCCGATGTTTCACAACACGAGTCTTCTCGTT
TTATTTCTACCCATCCACATTTTTATATGGAGCCTAAAGAACAAAGATGA
ATGGTATCACAATTTGCTGTTGATATGCGAGACGGCGATCTTGTCACATC
ATATAAGGGACGCTAACCGTCGGGGAATGTGGCTTTGGCCTTTTGGTAAC
ACACCACCGATCCGTCCAAGCTGGATTTACATTTCATTGATCGCTATTCT
CCCGATCGCTGTGTGGTAtgtcaaaaaacttttgaagaaaaggCTTTTCG
AAAGCCCAAGAGTTATAGACCTTGTataaattgtttcaaatttagttcaa
aatatttatttgccaTAAGTTGATAGGTTTTTTCTGATATAAagttcaat
ttatattttttatattgtaGAGTAGATAGATAATATGTTCtttcaatggg
cttttccagaaaaaaattgaacatggggtggaggatataataattttcag
cgatttacccccggacaaagtgacttttggcccccggacaacgggtttta
ccccccaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00051389TCONS_00051389Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_201supercontigscaffold_201:464292..468700 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.28	21.59	9.72	7.26	7.77	5.49	8.04	8.3	6.84	4.79	6.02	4.3	5.19	4.63	4.84	5.89	6.55	6.53	3.83	3.7	7.81	7.49	22.04	19.7	7.4	9.79	4.36	3.48	10.25	10.94