XLOC_035796 (gene) - C. hemisphaerica

Overview
NameXLOC_035796
Unique NameXLOC_035796
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_283:39804..50329+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035796 ID=XLOC_035796|Name=XLOC_035796|organism=Clytia hemisphaerica|type=gene|length=10526bp|location=Sequence derived from alignment at scaffold_283:39804..50329+ (Clytia hemisphaerica)
taataaataatttaatATATATAACATGTCTGAAGTTAGAAGAGCATCGC ATGCAGGATCGTGGTATTCATCCTCAAGTAAGTTCTTCTCCAGTAAATGA TTTCATAATTTTCTGTAGATCTATTTGAAAGAGTAGTAAATCTCTTCATC TTTTTTGAAAGACTATTTTAAGGTTATTTCTCACATTGTATCTTCTCATT TCTTTCTATATGGCTGGAAATGTTGTTAGCATTATAGTTTTTGTGCTTAC TaccaattattttaaaattNGCTGGAAATGTTCTTAGCATTATAGTTTTT GTGCTTACTaccaattattttaaaattgttctcaaATCCTAGCGGTCCAG GGGAGTCAAACAAAAGTTCTGTTTAGTCTGAcgtattaaaatttgaaata ttggCAAAATTTTCCTGTGTGAACAAATATATTTCCAGtgtaacttttat tttatgcCGGAGAAATTGGATGAGGATCATGTTAATAGTGGGAGATTCTT GAAGAAACTTTTCATGCCAGAGAAAGTGTTGATATGCAGGATACAGTTTT GTGTCTCATCatttaatgttttgtttatttcaattattattattattttt tttaatgcaaACCATGCTTACTTTCTATAGAGAAAGAACTGAATTCGCAA TTAGAGAATTGGCTTTCTAAAGCATCGTCAAAGAAAGTTGGAACCAGGGC ACTTATTGCACCGTaagaattttattgatttttttttaaatcttataaTT GAAATGCCAAATCAGAAAACAACAACCTTTAGGTTAAATTATGTTAATAA TCTCAAACACCAAGAGGAAAAAGAAATAATCAAGAATGCACACTAAGTAA AATTACTTAAAATCCTGTATCAATTATATGGTAATTTTCTTCTTagttaa taaaaaaaatgatttaaataaaatttaggCCATTCATTTTCTATCCTTAG TCATGCAGGTTATAGTTATTGTGGCGCATGTGCAGCTTTCGCATACAACA GGGTTGATCCAACCAACATGTAAGTATGTTGAAGATTTTGTTTCTGAGAA AAATTCTTAAACATTATTTCTCAAACATGAAAGGTCATCTGTTCTTTTTT CCCTTTTAAAAAATGCAAGGGAATCCTCTTACATTTTCAGGAAATTTTCT ACCCATGTTGAATAACAATGTTCAGTTCATTTCCTTGTTTAATTTATCTG TTTTAGGGGCTGTTCATATGGAGACAGGCTGGCTCGGCTAGGTGAGGTGG GATAGATCTTCAAATGTCACGTGATGTACTTTTAGCCATTTGATTCGTCA AAAACTGTGAGGTGACAATAAAAAATTTATCCCACCTCATTTAGCCGGGC CAGCCTGCCTCCATAGGAACAGCCCCTTAAAAAGCAGTATAAATGCTTGA GGGATTCTCACTTATCTATTGATGCAAGTAGTATGTTGATCATCAAATCA CTTTTTTCTTAGAAAGAGAGTGTTTATCCTTGGTCCATCTCACCATGTTT CATTGGGTGGATGTGCATTAACACAAACCAAGACTTACTCCACACCGCTC TATGATCTAATAGTTGATCAAGAAAGTATGATTTCTTATAAGATTACTTC TCTGTactaaactttttgacgtttttgtaaggccATTGGTCAGTTGAAAA ACGAAGCAATTCCATtagtcggttgaaaaatgaagcaatttcattgttcg aaattgacgtaacggatgaaaaaagtagaacttccttcaacttttttatg TTCGCACGaatcttttctttaaaaaaaaggttgagtgaaaaactgtcgcc catttagCGCAAAAGTGGATACCAGCCTTTATACTCCTATCAACTCTAAA CAGTGTGATCAGTTTTTGAAGACGCTGATACAACAAAAATGCAAGGAAAC TTCTTTTTGACAACGGTATTGAAAACAAGTGTAGGCGCCCTCTTGTGAAA AATGTAAGATTCCCTTGCATTGAAATGATAAACTGACGTCAATTTAATAG ACCTTAGAATGCTAAAAATAGTTTACACTCCACCAGAAAAGTGCCTCTCA TATGGCACAGTAGTCCATACTAGATGTCACTCACGTTTTTCTACActatt gggctgttccattaaaaattgacgaacctttttaaggcaaaaaaaaattt ttaaaaatgtagtgataccctggaaaatggcaaaatttgcaaaagaagtc ttggaaaattttttttcatactttAAAAGTAAGAGTGGACGAACAGAAAT GAATctattaccccctggaaattttagaatagcTTTTACCTACTGGTAct ggaaaaatgaagaaaaaaaagccTGGAAATTATTCTCCGATTATCCCCTG TAAATGTTCGTCCAACctcctgtatggatataaaatgtaaTGGCCCATTA ACGTCTATTCAACTTTGtgactttttcaaatgtttggaCCCCGGGTTTTT TCGGGCTTTAAGCATTAGatattttgacgtcacttttagcTTCCGAAACa cctgcagtagcaaaaaaattgaggtttttagcccaattattttccaaagc tgagatatttgactttgaattttcaaatttttacttgaaaatgatagaaa ttcaacgtaaagaatcatttttagaattctatTTCTTAATGAGGGCAAGT TAGGGCCTTGTACAGACCATTGAATTATAGATGTTATAAGATTCCTTAAA AATGTTAGGTATTTCCATGATATCTCAAAAAAAAAGGTGTTTTTCAGTAA TCATGAATTTTATCAGGCTAAATGAGGTTATTtctattgatttcaaagcc ctgAAGGGGCTAGATCTGAAtgtcctggatgggaaatgaagctactTATA TCCCTTTCTCGTGACCCGTGTGTTTTTCAAACTAAATTTGTAAATGCAGG GCAAACTTAAGGCCTCACTTTTGCTTGCCTgggaaagattgaagatttcA CTCTTTAGCCGCTTCGGGGCTTCAAACTAAATGATTCTTCTTCTTTCCTC TCCTCGCCAGTGAATGAAGAATTACACAAGACAGGGAAATTTGACAAGAT GAGTATTTCGACGGATGAGGATGAACACAGCATTGAAATGCATTTACCAT ATATTGCCAAAGTCATGGAAAGGTATTGATTTTCCAGCATGGAACCTACA CCGGGGATCATTTTCTTTCGTCAATATGTCAAACAGCTTTTTATTCCTTA GGGTTCTAAACCTTAGGATCTCTGACATCTTTTATATAAACCCCTACTGA TCAGACTCAATAGGAAAAGTgggaaatataaattttttgaaagcttcACA AGCTGAGGCTCGAATCTGAGAATCCTGATAAGCGCTATTCTGGCTAAAAG GTGTCATGGATGTTGTTTACTATAAACTGCTTGACCCTTTAAGTCTTTGA GGGTaactttagaacgccatggctTGACCCCTTCCCACATGTGTTTACCC TTTCGATTTGTATTTAGATACACATAGAATGGGCATATCCCAACCAATCA AAAAAGTCAAAGCATACCATAccatgggcttttccagaaaagaacTGAAT ATAgggatggaggatataacatttcttGAAAATCGCCCCTGACACTGTGA CGTTTGATctccggacagcaggtctaacccctcCGAACAAGCaacagttg accccctggacattcaaaactaccctcaaacagagcaaatttacccccaa acagagcaaatttacccccaaacagagcaaatttacccccaaacagagca aatttacccccaaacagagcaaatttccccccccccccccagacaaGGCG AATTTTGTACGCTTTTCACTatcccccggacactatatcctccaccccat gtacagacattttctggaagagccttaTAAGGCTTCAAATccttttaatt taaatttatctGACACTGGGCTCAATCTTGCTTATCCttgaattcatttt ttcttgttaattttttttataagaacataagctatgaaggccaaaaaaaa ttaaaaatttgaaaacgttTTTGACTATAAGACCCGAAACTTTAAGAAGA CtcgaaaattctaaaaaaagagTTACTTTCTTTAAAATAATGTGTATAGA CTTAACTATAAGTTTAATAGTTTCTCGAattattctttcattttttagta AGAAAGGCCAGTTCACTGTTGTACCGGTTTTAGTTGGACACACTTCCCAC GATAAAGAATTGATGTACGGCAAAATTTTTAGCAAATATTTGAAAGACCC GGAAAACCTTTTCGTAATTTCCAGTGATTTTTGTCACTGGGGAAGCCGCT TCAGATATACGTATTACGATAAAAGCAAAGGAGATATACACCAATCTATT GAAGACCTGGATAAGCAGGTATTGTTCATGATAATTTAAACGCACATGAG ACAATTTCTAAACGGCTGAATATAGCATCTATAAAAAAGCCAATAGTACA TTTTATACTTAATAGCTGCAGTTAAGCTAGAATCCGAGAACGTCTGTCTG TATGTGCGTCTGTCTGTCTATCTTCCGTGTTTGAGTCCAATATACTTTAT TTAGATTATTGACTATTTGCATAGagctctttttggacctaccccggtgg ggtagaggtccgcaaaatgtcaatacctaaattgtgacgaagcccgattt tcgaaaagaatttatttccggccgaaaatgccggaaatatgccggaaaaa ctgtttttttggcattttctcgagattttatcattagtttttaatgattt tttgctcaaagatgtgtattaacaatgcccaaaacatgaccgagtccgat ttttgagaaaattttttttccgaaaatgccggaaatatgcttgaaaaacc ggttttttgactttttctcgaattttcatttttagttttttctgattttt tgcagaaagatgcgtattcgcaatcaACTGGAACAAATATATCCATCAAT AATCAATCGCGAACCAGAactttcaataaatcaaaatcatcataaCTATT TAGATACCATTCTCATCAATATAAACCAAAACATATCTCGCCATGTAATC AACATATCAAAATACCAATATCGAATAACATTTAACAACATCCTCTCATG GAGGACGTAGCCTTCCAGAAACAAGAACTTGATTTAATTTGCTGAAAGAC GCTCCCCGTTTCGTAAGGGAGTCAGCTAATTGCTTCGAAGCTTCGATCCA CTTGATTGACATTTTATTATCGTGTATCATTTCATAAATGACACCCATTT CAATGCGTAGCCTTTCTCCGATACCATAGTTGTTGAGTGAACATTTTGTA CCAGAGATTTGTTGTCAACAAATGACATTATGGGGATTCGATTCTGGTGA TCAGATTTTCCGTAAATCAATTCTGTTAGAAGACATCCGATAACGAAAAC ACCTTCACAACCATCAGCAAGTGACAATGTTTCTGCAGCAAGGACGGCCA GGAAATGGGACAGCGCTTATCTCCTTTGCCGAAGGGAAAAACAACTCGAC CACCAGTACTGGAAGTTCCGTCAGGAAGATTGGCGAACGATGCATCATTG AATAACATTAGCTTAAGATTACTCAGTTCTCCAAGACGTGGGAACTTGAT TTGTAACGCTTCAGATTTCAACTTTCTGATGACTTTATTCGCTTGCAGTA AATGATCTACTGTGGCTCGATTGGTTATCATACTCAGTTCAAGAACGCCA TATGAAAGATCTGGTCGTGTCTGTGTTGCGACCCAATTCAATTGACCGAT TGCTGTTCTCAAAAGTTTTTCCTCTTTGGATGTCACTTTATCGTTCTTTC GTAACTTTCTCGACGGCGTGATTGGAATCTCCTTGATTGACTTTACGTAG ATCAATTGTAATAAAGTTGTTTGATTTTGGTTGGTCGAAACTTCCAATCC GATGTATTTGAAAATATCAGTTTCCTTAGAACCAACTTTGTAAACTTCAC ACACCTTTTTCACAACAGTCTTTAAGAAGGTCTGTGAACCAGcatacaaa aagtcatcaacaTGTAGGATAAACATTCCTGCAAGCTGGTTAGATGAATC ACGCCACATGAACAGTGCTTTGTCGATGGTTGATTGTACGCATCCAAGTT TTAGTAGTGTTTCTCGAATCGTAAAATACCAATTACGGGATGCCTCGTTG AGCCCATACACTACTTTTCGTAGCTTCCAAACTAGGTTCTCGGCTACTTT TGCTTCAGTGGACGGTTTGACATAGATTTCACGATGAATGTCTTCTCCTT GTTAAAACGCTGACTTAAATCAATCATTTCGATAGGCCATTGCTTTGTAG AGGCAATAGCAAAACGAAGAGAGTCCTTGGATATTGTGGGAGAGTCACTT GGTATATCTGATGTCTCTTCAAATCCTCTCACTACAAGTCGAGCTTTAAC TGTAAGGTTAGGTTTGGGTTGTTTCTCAGTCACTACCCATCTTGTTGAAA TCAAGGGTTGGTTTTCGGATTCAACCGGTTCATATACGTCAAATGACTTC CAATTGAGAAGCTCTTTTTCTTTAGCTTCTTTGACAAGTTCTCTTTCTTG GTCATTTGTGGGACGAAATATAGCATTGAAATTGACACTTTCACTGGTAT TTTCCCATTCAATTGCTGAAAAGTCAAGACATAAATGTTCACCATTTTCT ACATTTTCGACATTGAACCACGATGCAAACTTTCCTGTCGCTTTACCTCC TCTGCTGATGATACGGGCAGTTTCCCATTCAGAGTTATTTTGTTTAATAC GCACAATGTCATGTAGTCTAGGAAAAAGTTGTCTTTCTGATACAGCTGCA GGCATTGGTGGTGGTACTACAGGTGTTTGATCCGAGGTCGGTGGTGTAGG AGCATCATCTTCATAATGAATTGTCACTGGGCTGTCAATCGGTTCTGTAG ATCCGGTATCGATGATTTCCGATTTGTCACATGCTGTTGGGACTGTAACT TTGGAGTTAATACGTTTGGTTGGATTACTGTTTGGATTTGGGTTGAATTC TTCTCCGACTTTGAGGATTCGACAACTGGGAACTCTTNGTTGGGTTGAAT TTTTCTCCGACTTTGAGGATTCGACAACTGGGAACTCTTACATAAACACT TCCATGGCGGACAAAGATATCTTTCCGTCCTCACCAATAACTTTTCCAGG ACCTTTCCATTTGTTGCTAGACTCTCGTTTGTAGTATACAGCATCACCGG ATTCGAAAATTTCGCAATGCACGCCTGATTCGCTCTGATGATTCAGCTTG TATAAATGCACGTCTCCCTGAGTGTAGACTGTTAAGATGTTGATAGAAAC GTTCAGATGTTGTTGTACCCTCTAAAGCTGGTGGCTTATCGACGATCACG GATAGAAGATTAGGATTTTGTCCAAACAAAAGCTGATAGGAACTGTAGCC GGAGTTCATTTGTAAACAGTTTTTTGCATGAATTGCCCATACTAGGGCAA CATCGGGTTtcatttttgggttttcttcCAGGACTTTTTGCAAACATTCA TCAACAACGGCATGGTTACGTTCACATAATCCATTTTGCCATGGACTTTC TGCTGCAGTGTTTCTgattttgatatgaaattaaacGAAGAATGTATTTA CCGTCTTCCCACTTCTTGAGATCCATCACTACGACTTCATTGAAGGTGGT GGCTAATGGTAAACTGACAACTGGCCTTGCaggagtttttttaaatttac gaCAAATTTGACAATCAGCTGAAATAGCATCAATCACTTTGGAGCAAACT GGCGACAGAACTCCTGCATCTCGTAATAAACCTTTTAAGCGTTTCGGGGA CGGATGAGCAAACTGCTTATGAAGTTTTGTGACAACTGCGGAAATTTCCT GATCACTTTCGACACCGGTAAAGCAACATTCTATGTCAATAGATGTGTCT CTCAAAGGGATGCAATAATGGCCTGCTGATGTACTTTGTAGGTTAACAGC ATTTCCGTAAATTTCAGCTTTATCGTTCACCAAATCAAGTTTCATTCCTg cttttttcattgcatttttaCTTAAAAGCATCGGAATATCACTATCAGTA ATATCTGTTTCAATGGTGCATTTTTGTCCAGCAAGGTAGCAGGGCAACAA TGCTTTACCTTTTGATTTGAGTCGTTCACCACCTCCAAACTTGTAAATAG TATCACTATCTTTGTAAATAATCTCACTTTTTTCACTGTCACTTAGTGAG TCAATAAAACACTCCATCCAATCTTGTCCAGAAGCTGTTGACGAGCATCC ACTGTCGAACACGGCAGCATTGGTAGATTCTGTTAACAACACTGTCATTT CATCATCATTTTGGCCCGTAAACAGAGCAAATTGTTCAGTCTCATGTAGA ATGAATGTTCAAGATTTTCATAAGCATGAGGGCAATCTTTCACGAAATGT AATGTTGAATCGCATGCCATACAGCGGAGTATGTTTCCATCACCATCCAA TGGGTTCGTTTTGCGACTGGTGGATTGACCTCTTCCTCTGTTGAACGGTC TGTTTTGGTAGTTGGTGAAACGNATGGATTGACCTCTTCCTCTATTGAAC GGTCTTTTTTGGTAGTTGGTGAAACGTCCTCTGCCTCGTCCTCTGCCACG ACCGCGATTTGGAAATTTCTGTTTGAAAGTGATGTTAGCTTCCTCCTGGT TCGATTCATGGATATCCAATTTGATGCTTTTAAATGGTTCGGTTGCGATG GGTTTTGCTTGTTGtccaaagaaatttttcaatgagtttttcatttgttt atataACGTGGTGTGTTCATTATAATTAACTCCTGTCAGAACCATAAGAC GATCATTATTTAGCAACCCTGAGTTCTCAAGTAGTTTAAATGCTAGGACG CTTTCCGGCaactccattttgaatttttttgttttattgtaaCGCTTCTC GAATTCAAGTATGTACGTATCCATTGTTTCACCTTCAACTTTCTTATATC GATCGAAATTGACGTAATATTCGTACACTTCCGCCAACTCATCTTTTTTA AACACTGTATCAAAGAACGCTATCAAAGTTTCTACGCCATCGTCTTTTTT CAGATCATCAAGATCATCTTCATTGAATACTTTGTCTCTAATTTGGGATT TGTCATCCTCTGGTAGAGACAAAGCTACCGCTAATCCTTGCTTCTTCTTG GCAAGGTTTGTGACATAAGTCCAAGCACGCAATTCTTCTACGTATCTCGT ATAAGGTTTGTCATCTCCAAAGGCTGGGGGCTTTTGAAAACTTTCTGATG ATGCCATTTTGAACCACTTCTGCTACCATGAAAAGTCAATAAAGCTGAAT AATATAAAAGCCCCACAGCCACACCAAATgctaatattttaaaaatatat actaGCCTATAACGATCAGAAGAATATGAACGTTaacattttttccttat atttctatgtttttcacacaaaaacattattgataacaatgctcaccatt aagcatgattcaattaataatcaataaaactgatttttgcgaccagaact tcctatttattttttccctacaacccttccctctccccccatcaactagt cagaaaatctgccgtatactatcttcgctttctaaTTTGAATGATGACGC TACTTTTTCCACCATCAGATTATCAAAGGCAAaggtgttgtgtattttcg ctaaacgctatatctTCTGACATaggtcttcttttttcttttgaaggGTA TGAAGATTATCGAGCGACTACATACATCAGAGTATTATCAATATCTTGAA AGGTATTCAAACACGATATGTGGAAGAAAACCTATCGGAATTTTCTTGAA TGTAAgtgtgttaaaatattttgtgCATGAACAGCGTGCTGGGTCCGGAA AAAAACAACTGAAGAATGAGAAATTAAAATGATCTTACTTTTTTGTTTAT CCAGCTTTGCCAGCATAGAAGCAAGCTTTCTTATTAttatatcataaaaa agaatCCAATCATTAGGTTTACCATTGCTGCAAAATTTTATTATGTTTTG TCTGTTACATAGATAACCAGTTCAATTGAACCAtagctttttttgttttt caatttcaggccgTGGACCAGTTAAAAACAGATGGTACAATATTCGAGTT CCACCAATACGCACAAAGTAGTAAAGTCAAACGGATGAATGATAGTTCGG TTAGTTATGCGGCTGGTACCCTGGTCTCGTTGTAACACTCTCTTGGGACA CAGTTTCATTGCTCGAAAACTGTATTGCTTACCAGATATTATGTTTACTT TGCTTGAGACAGTACCTGACTGGatgatttcaattttcatattgcCTGAA CAATTCGTCATCTACAAAAAGAAGGAATTGcaagttgaaatttttatgtT GTTAATGTTATCATCAATCGACTACTGCTTACCGACATCTAGAGACTTAG ACTATCTTACGCGTTCTCTGTTCTTGAGGATATGGATTTCCTATCAACAT ttcattaaaggttttatttttaaaaaagtgttcccgtttcatatcagaca cattttatatcaggacagtcTCTGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00056820TCONS_00056820Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00056820-proteinTCONS_00056820-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_283supercontigscaffold_283:39804..50329 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
MEMO1PREDICTED: protein MEMO1 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (18.57 tpm) - - (64.45 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
56.61 60.21 61.81 64.45 28.63 22.01 39.27 43.32 36.62 36.92 27.24 23.1 22.84 18.57 25.82 27.65 41.29 37.47 19 26.44 27.58 27.42 46.02 48.12 28.24 33.54 34.75 26.06 33.68 36.56