XLOC_033029 (gene) - C. hemisphaerica

Overview
NameXLOC_033029
Unique NameXLOC_033029
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_211:17365..22065-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033029 ID=XLOC_033029|Name=XLOC_033029|organism=Clytia hemisphaerica|type=gene|length=4701bp|location=Sequence derived from alignment at scaffold_211:17365..22065- (Clytia hemisphaerica)
CCAGGCTAGAAAATATGAGAAAATGAACAGCAGAGGTGACCTACCAAACC ATCAAAACAGATATGACGTGTACAACTGGTTGTCACAGCTTACAACAAAA GAACCTTTAATCAACCAATGGTTAAACGAAGGAGATGGAAACCATGTCAT TGAATTGTATAAAAACAATGGAAACCAATCGAATGGACCAAGTAAGTTAA ACTCTCAACCTTTTACTTGGACCCAATAGGGGTTGAAATAGCGAGTTTGT GTGTTTTTCTGCAACGGAAACGGATAGCTTCAGACCAGCTGAGGACGACG GTAAAAAAAGGCACTTTTACTGTCCTCGACTTTGCGGGTCAGAACAGCGG GTTTTTTTTAATCCGCTGGATACACTCTTCATTACAAACAAGAGTCCCTT TAAAAATGATTTCCCTTTCAACTCCTTCAAAATCTAATAAAAATACATCT TACATAACACGAAAAAGCCTGAAATTCCAAAGAATTTTCTCCACCCATTT CTGGTCGACCATGGTTCAAATGGTTACTTCTTAAAACAGATACTTGGTGT ATCGATTATTTGTCTAAAGTAGTCAATACCAGCAATATTTATGTGAATTT TTCAGGTCTATGGGTATGGGTGGTTTGTTTTCTATCAGTGGCTGTGATTT GTATGGGTATTGTGATTCTGATTGGATTGGGAAAGTGTTGCAAATGGTAA GTCTTCATTTTAGAATCTGTTTTACCGAGATGGGGAATCCGACTTTGGAG TGAGTTTAGAGCGAATCAACACATGTCAGANNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCTCCACCCATTTCTGGTC GACCATGGTTCAAATGGTTACTTCTTAAAACAGATACTTGGTGTATCGAT TATTTGTCTAAAGTAGTCAATACCAGCAATATTTATGTGAATTTTTCAGG TCTATGGGTATGGGTGGTTTGTTTTCTATCAGTGGCTGTGATTTGTATGG GTATTGTGATTCTGATTGGATTGGGAAAGTGTTGCAAATGGTAAGTCTTC ATTTTAGAATCTGTTTTACCGAGATGGGGAATCCGACTTTGGAGTGAGTT TAGAGCGAATCAACACATGTCAGACACCGATAGAGGAAATTTTACAAACA CCAATTTCATTGGTTTTGATAGTTGAAAGGAAAGATTTGCACTTGAAACA TCCCTGTCACACAGCCCCGGTGAAACCCATAGTGAGGATAAATAGGAATT TTAATTTTTCTGCGGTCAAAGGTCATTGGGGATGGTATTGGAGAGCAATT TTTTCCATTGAATTTTTTAAATGGGATGAAAACAAAGTTTTCTAGTGGGG CTGAAATTGTTGGGTATTTCTCCCACCGGGACGGAATTTTTGGCTAAATT GTTGAGTGAGGCGGGTCTGTGACAAAGGGATGTCTTGAAAATCGTTAACG ATTATCCAAATGAAACTGTATGGACTGGCGTTTCTTGTCGGGAAGAAAAT ATTCAAAAACACTGAATAATCGATCATGGTTGTTACCATTTCCAACTACC TCGTAACCAATATTTTTTTAATGTATTCGTTGTTTTAACTTAAATTACTG ACTTTGCGAGAAAAGATCACTTTTATTAGAAATCGGTGTCGAATAAAGAT TTGGCAGTACAGATAACGAAGTGACGGTTCTCAAAACAATACATGCTGAA TGATATCACTTTTATTTTCAAACAGGGAACCAAGCCATGGAAAAAATTAC GATTTATGGAAATTGACCAAGACTGGTGCTCGAAAGTTGTGCAAAAAGTA GGTCTTTATTTTATCGTTTATCAGTACTTTTCTTAATAATGCGATTGTTC TTTTAAAGAAAGCTAACTTGGGACACTACTCTTGGGCGGTACTTTTCTCT AATTTAATTTTTGCAATGAGAATTCTAATTCTTTTATTCAGAGCATCAAG GAATCAAGGGCGCAACGATAGAAATGGTATGACGTTTGTTTCTTTGTAAA CCTACTCGAGGAAGGTAGAAGTACAAATAGTCTCTCGAAACCTAGCCAAA CGTTAATTTAGTTATCCACGATTAACTTCAAATCTAATTGGGTAGAAAAC TTTTCAATTCGCCAAAATCAATTAGCCAGGGGATGCTTAGTAGATCCCAG AGTATATTCGACACAAAACAGATTGAATGTTTTTATTGGTTGTTCTGAAA GAAAGGTTCACTCCTCAATGCTGATAGCCATAAAATTAAATTCATTGATT CATAGAAAATGGTGACCCTTATGAGAGGCCAGTAGCCATGCAATTAGATG AAATTATTGTGTACCAACAAGGACGAAGAGTGACTCTCGAAAATGATGAA AAAACTCAATTGTTGAAAGAAACCATAGAGAACCAACAAAGTGGTAAGAA ATTCTAGATCTCAAATGTAACAGAAGACAAGAACTGAAATTCCACAAAAA AAATTTATGTTGTCTGTAGCATTATTACATTCAGCTTTCTTTTTAAATTA AGATGGCATGAAAAGGTATAAAGTTTTTTTTTGGATTTCAAATGCGCGTA CACCCCTTAACTAGGTCTTAGGTCCATACCTAACAAAGATTGGGCCATCT CATATAATGCCAGTGGCACTTGATGGGTTAATCAGACAAGTCTTGACCGA AGGTCTTCAACAATAGCCTACAAATTCAGTAAACTTAACTCCTTGAATTC GTATTTTTTTAGATTCTGATCGAAGTTCACCATTTTCGCCTCAACGATCT TCAAAGAGAGCAAGTTCCAAACACAATAGCGTGCATTTCAGCCCAGACCG CGTTTCTTCACCTAGCCTGAAAGCGAAACAAGCTTTACAAAAAATTAAAT GTTTAACAAAAACACTATCAGCCTCTGGGACAACACCTGATAATAAACCA ACAGTTGAGAATTTCCAGGCTAGACCTTTACCTCCATTGCCAACTTCACC AGAGTTTGTTCTACAAGAAGATTCACCTTTCAAAATTCACAGTCTATTTG ACACTAGCCTGGATGAGCAACGTCATAACTCACACGGTGAGACAAAGGCT AAATTAAAATTAGAAGACCTTGAAAGACGCCTCCAAAAGAACTCTAGTCA ACAAGACTTATACTTGATTGACTTTACATCAAAAAGGAAAAACACTTTAT CGGAATTTAGAAAACATAAATCGACCTATAAAAATCGTGCAAAGGAGATA AGTATGTTTGAGATGCTGCGGAATCGATCTAGTTCCATCGATGAGCGATT ATCAGAAGCATCATTGAAACGACAGCGAACTCGCGTAAGACGATCACGAA GTTTAGACGACTTGGATAATGTTACGGTAAACGAAATCTATGTCGATATC AAAACGTATGAGGAAGTACCTGAAGAAATGCAAAAACAAACCCCCCTGAA AGAACCATACGATAGCAACCGTGTAACGGAATATTCACCTAGAGACGGGG GCTTAGCTATGATGTCTCCCCGAGACGGGGGTATGACAGTTAGTACAAAT ACAATTTATGGTACAATCAAAGGTGAAAACGCATACGCAAGAATCACCGA CCTACCTGCGGTTGCAAATCGATTAGCAATACAGAACCGCCCAATGCCGC CCACTCCAACTTTACTGGACTTGTGTTTCATGAAGCAGAATCCCGCCTTG CCACCCCATCAACAGAATAAAAAACCAAAAAACCATATCTATCAGAGAGC AAATCGCGGGAGACCTCTTTCGCAACAATTTCCATCTTTTAGAAGTAGTA TTTCAGGTACAAGCGGACCCTATGCCAAGATCAACGATGTTATGGGCTTA CCAAGAAATTCAAGATTTTATTCATCAAGTTAATATTATCATAGATTTCG AACTGTAAAGGGTGTAGATTTGTTGCAGTTTTAATGCATCTTATTTTTGT GTAAATAGAAAAGGCAGTTTATATTTTGATGAAATAAAAAATCATTCATA CCATGTCTTTTTTGCTCAGCTCTCTCCAAAAGTGTGTGATAGAAGTGGTC T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052164TCONS_00052164Clytia hemisphaericatranscript
TCONS_00052163TCONS_00052163Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052164-proteinTCONS_00052164-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_211supercontigscaffold_211:17365..22065 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.33 0.22 0.85 0.93 0 0.02 0.09 0.08 0.15 0.14 0.27 0.07 1.57 1.21 0.82 0.78 15.94 29.1 1.46 1.28 9.31 8.5 3.35 5.96 8.37 8.17 5.24 6.53 0.17 0.17