XLOC_033041 (gene) - C. hemisphaerica

Overview


Name	XLOC_033041
Unique Name	XLOC_033041
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_212:32938..43428+

gene from alignment at scaffold_212:32938..43428+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_033041 ID=XLOC_033041|Name=XLOC_033041|organism=Clytia hemisphaerica|type=gene|length=10491bp|location=Sequence derived from alignment at scaffold_212:32938..43428+ (Clytia hemisphaerica)
GTGAAAACGTAATCTATGGGATAAAAGGGACGAGGTGTGATGATTAGGAA
CGAAACCTGTGTAAAAAAGATTGATTTATATTCGATTATATTGCTTAATC
TATCTATTTCAAGCGATATGGAAAACCTAAGGAAAATTTGGAGTCTTAGA
GATATCACTAAATTTTATGATTGAGAAATATTTAAATCACGAAATTGATT
TGTGTTGAAAATTTATCTATTTCAAAATGAGGAATAGACCCATCAGAGTT
TGACTGAATTCGGGACTGAATTATGTGCAGGGATTTGGAAATAAAAAACT
GAAATTCTAACCTTTGaattataatgtttttattCCAACTTGTACACATT
TTTGCAGTGTTTAGTCTGATTTGTTTTGAACCATCATCCGGCAATAAAAC
GTCCCCCGCATCACCTGGAAATGCAGGACGCAATGCAACAACACCATCAT
CACCTGGTAATGCGGGACGCAATACAACAATACCATTATCACCTGGTAAT
GTGGGACACGGCGAGCATGTGCAGAACGATCCAATGTTATGGTTACAACA
TAACGTGTGCACAGTACGATACTCCTTCCGAGACATCACAAAATCCTTTC
AAAATTGCACATTGATTAAAGAACGTAATCCAATATGTGGGCGTGACATT
ACTGTTGTCTATAGCCCGAATCCACCCTTCGCTATGGAAGGCAAGAATAG
TTCTGCTGGATTTGGGACAGGGCAATACAAAGGCATCTTATTCGGTGAGA
ATGAATATTGCTCGTCGcaacgcccccccccccacacTGGAAATTCGGTC
AAAAAACCTCATTTGCAGATATCCTAAGTCATAAGCTTCTGCTGTTTCAG
TTAATAAATAACCCTACTACCCTActaaacaatttttatttttgtgaaaa
cataTAAGCAACTTAAAAGGAGCATATTTTAAAGTGACTTCCAAGGGGGT
AACTCGGAACCATTATCTTTTGAgagaatttatgattttttttgaactTG
CCAACGTTCTTTGCCTAATGTAGGACTTGCACTGGTGTGAAAATGGAACC
TATGAACTTTTAACTTTAAATCTATGATTTTAGGAATCCTCGAAGAAACT
ATCATCAAAACATGTTGTATGAGTTGTAACAAGTTGAATATATTGCCACC
TGTCGGATTCATCGACAAATTCCACAACCGTGAAAAATATGACTTGATTT
TACCTATCGAGGGTggagaaaataataaaatgtttttctcgaCACCCTTC
TATCCATTGATGACTCTTAAAGCTATCGCGTTCATCGGGAAGCCCCCGGT
CCAACCGAATGTTGATTTGTTGGAGATTGTTTTCGATACTGTCTGGTCAA
GTTGGTCTCTCGTATTGCTGGCAATTATGATGGCATTTGCTGCTGGATCG
GCTATCTGGGTGTTGGTAAGTGTTTTGAAAGCAAGTACAGAACATGTCAT
ATTCAACGTTTGGATTTTTGCTGGACCCACGTTGAAgagcttaaaaatct
tttaccatttttattttttcctgcCAATAGTGGGGGTTAATGCGAGTTAT
GTCtggaaaaagtttttatggATAAAGAACTGGGGGTGATattacccttg
ccgaccgacggggtgTGCcgctgatttttgaaaaatggaccctgcgTGGg
actcatttaaaaaaaaaaaatccatatttttccaaatttccccAAAAAGC
TCTACGAGGGACagattttggtgtttttgcgaccctaccaggAACCCatg
gaggtgaaaaaaggtaccgGAGTGGAACATCTccgtacccctttttgccc
aagtaccccccccccagccCACGGGAAAAAACTCTTAACTCCTAAAATAA
GTTAAAAAGTCAATGGTTCTTCAAAGTTTAATTTAACCCTATTCTtatag
gcttttaggggcggttcaaaactagggggcttttcctgtagccatccctt
taacttttgatctagtgggtctttttggacgaaatttggcacacaagatc
cttatcacataaggtaacttttgataaaaaaattttcttctcataaatag
ctattgtattctaaggctttagaaaaaagttgcctgagtttaaaatactt
attttatcctaaatattcaataaattacagttcaaacgatatatttgaca
taagaAATAAATTCGttttggaaaagtgtcaatttttgtgacaccttact
ttCAGAAAtatcatcatgctcaaggtatataaaattttaggtgtctattt
ttttttttttgaagctaaataaaggTTTacagaatttacagaaaatttca
tggtaAAAGCTtaattatttcaggagctattaccaataatttggCCTCTG
AACAGAaaccctaggccgaatagggttaaggaaaATAGTTGACACCATTG
CATTCAGAGCATAAAATTCTGAgcccggggggtacttaggcaaatggagg
gtacggtatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggggggggggggggta
aatttctaaaaattgttATGTCCTCTACCCACCAGATTCGATTTTTTTGG
AAGAGTCTATTGAGAGAAttaacaataacttttatttttacagGACACAT
GGTACAATAAACCACAATTCCCACGCTCCTTTCCAAGAGGACCATTCGAA
GGATTTTGGTGGGCTTACGTATCCATGACAACTGTTGGGTAAGTGGCAGT
GAGGTTTGAACCAcaaatttataaagcccgaagggctacatgtcatgctt
taagccatcgcaggcaaaaaaaattaatgttggaaaaaatattgttgcta
ttattttcgaaaacccgaagcgaagcttctgattggtcaagcactgaaat
tctattgtaaagtcACGTAATCTAGGTAGgtatttcctacctaaccacgg
cacactttccAGCTAAAGCtttacatctagcccttcgggctataAATCTG
TGGTTTGAACATAAAAGGGaacaaatgaatgaaaatatttgtaGAACGTG
TTTACGTTATCAATACGATCCAAGAATTCTCCACATTTTATTCGCAATGT
AGTAATCAGCAGAGGACCTTGAGATAAGTCGAATAAACGTCCCCTGGTTA
TTTTTTTAGCTATCAAAAGCTGAATTGCTCTAAAGGGGTCTAAATAAACT
GGTTTTAGTAAAAATACCCTTTTGAGGTTTTTTAGATGTACAATTTCCAG
CACCATCCCGGATCCCAGAATTTTGAACCCTTACCTTTTCGGGATCTTAG
AATATTATTTTTAATGTTAGTGATTGAAGTGGGAGAATTCTTCAGGACTA
AAGGGGCTGGTAACGATGTTTATCTAATTTATTCTTAAATTGAGATCGAT
CGATCACATCGCATCATTTTAGGTACGGTGATCGCACTCCTCAATCGATC
GCAGCTCGACTTTTCGCGATCGTTTGGATCCTTATTGGTATTGTGTTCTT
CAACGTGTACACTTCTATGTTCACATCGGTCTTGAGTGTTCGCATGGGAA
CTAATGTCCAGTTCAGCGTCCTTGGTGAAAAAGTATGAATGTTTTTTAAT
TCAGACAGAACTTTATCTTATATTTACTTTGAGCTTCAACAAAATCGTAA
AACtttttgcctgacagcaaacaatttgcaaaaaaatatgcagttgacgc
tctctaaagaCCGATCTTCACTTTCGCGTGAAAATGAGCAAACAGTTTTT
ATCAATCGTTCCTTAACCTTTTGACCCCAaatgccgtacatatacgtcTT
TGATACGTTCCTAATACCGTACATTTACGCAATTTGGTAGACACGTCTTT
CTCGTGCCATATCTTTTATTGGCTTGCTTGGTAAtcgttcaaaaaagaag
aaaacgaaagtggaaaGCTTTCCGTTGATATGACAACGGAACAGCGGGTT
TGAAAGGAATTCGATTTTTAGAACaaagcgtcgtttatgagagttttctT
TTGACGGTGTCTTTCAAAATCATCGAGCGTCGTATccaatagtagaacgt
cgaaatTTGGGAGTGTCAACAGAGCTGAAATGGCTCTTATTGGACAGAAG
ACTtatgtttcttttttactttctgACATAGGTTGGAATCTTGGAAAACA
CATCAGCACCTTTCGTTGGAGCCAGTGCAAATATGGCTCTTATACAAGGT
agattaatttcaatttttcattttgcatTATCAAAATTNGATCACATCGC
ATCATTTTAGGTACGGTGATCGCACTCCTCAATCGATCGCAGCTCGACTT
TTCGCGATCGTTTGGATCCTTATTGGTATTGTGTTCTTCAACGTGTACAC
TTCTATGTTCACATCGGTCTTGAGTGTTCGCATGGGAACTAATGTCCAGT
TCAGCGTCCTTGGTGAAAAAGTATGAATGTTTTTTAATTCAGACAGAACT
TTATCTTATATTCACTTTGAGTTTCAACAAAATCGTAAAACtttttgcct
gacagcaaacaatttgcaaaaaaatatgcagttgacgctctctaaagaCC
GATCTTCACTTTCGCGTGAAAATGAGCAAACAGTTTTTATCAATCGTTCC
TTAACCTTTTGACCCCAaatgccgtacatatacgtcTTTGATACGTTCCT
AATACCGTACATTTACGCAATTTGGTAGACACGTCTTTCTCGTGCCATAT
CTTTTATTGGCTTGCTTGGTAAtcgttcaaaaaagaagaaaacgaaagtg
gaaaGCTTTCCGTTGATATGACAACGGAACAGCGGGTTTGAAAGGAATTC
GATTTTTAGAACaaagcgtcgtttatgagagttttctTTTGACGGTGTCT
TTCAAAATCATCGAGCGTCGTATccaatagtagaacgtcgaaatTTGGGA
GTGTCAACAGAGCTGAAATGGCTCTTATTGGACAGAAGACTtatgtttct
tttttactttctgACATAGGTTGGAATCTTGGAAAACACATCAGCACCTT
TCGTTGGAGCCAGTGCAAATATGGCTCTTATACAAGGTAGATtaatttcc
atttttcattttgcattatcaaaatttcattctttaaAATTCTTTACAAG
GGTGGGTATAAACCTTTACTTTAGCCGGTAAGTCCtagaaaaaacaacag
aaaaagaaGGTCATTATAAACTTAGTCAGGGAGGTAAAAGGACagcaatg
ttatttttgtgttttcagTTTATCCGAATCTTTCTTCATTGGGAATCGCT
CTTCGTGATAATGAAATCCACGGTAAGCTTTTTACgcgtaaaaaaattga
aaagttttaacATGAATGTCTTCAGGCTACCTTTTCTGGAAGATATTTGT
CcggaaaaaaagaagattctCTTCTACAgtaaactctcgcttattcgagc
TTCTATTGTTCAACTTTTTCTacaattcgaacttgtttccagtccccGTC
AAAGAGAAACCTTCTCAacgaacttctataattcgaatctctctgtaatt
cgaacaaataagatttccCGTGAAAGCTTGTCTCTACTTGtgctagacga
tgttatcgtccgttacagtgatagtaaaggcgggaaaaaatggcggtatg
gcgttatggcggtatacggaaaaaaatcggcgggagagtttcgaagactg
gcaactctgtcgactgttaactcttttcggcaaaaaaacccgtttgcgaa
ttttcttcggctttgagcttttttcttagatagtgattcgtcttagacta
taacatagtctataCTTGTGCtcgctgcgatcgcaccttttggcttcaat
cctttttgcttggaaaaaagattacgtcataaaaatgtagcgcgctcgaa
attttttgttcttttgatcAATAGTGTGGAAGCTTCGCTCAataaagtgc
gatcgcagcgtgCTCTCTGTCTTATTACATGTAATAACTCGTCTTTTTAC
CACCATCAAGCAATTGCAATGGTTGAACTGGCTGCGTTGTTTCATTTGGA
TTACTTCAAACGTTTTGACAGTTCAGTGGATATCCAACACAGAACAGAGA
TCAGTGGGTCAACATTGGGTGTGATTACAGCCAACATAGATCTGTTTGGT
ACTATTAGCACCTTCTTTGATGCGAATGAGGAAAGTTTACAAGCAATCAT
CACAGGAGCTGTCATGTCTCAGGTTAGATATATCGTTTGATACGTTATCA
GTTTATTGAAAGTTGCTGAAAATGTTGCGCCCGCTCTAAGACTTTTAAGA
ACTTTCGCGACTTTTGGCCTCTATTGCAAAATTCTTAACAAGGCATTAAT
TAGAGTTTATGCAcgtgaaatattctttcaaaaattgaaattctatAGAA
ATTCGAATTTGTGATGAACATCAAATTTAAAGTATATGTtaagtaccctg
agtatcagaggttaagttttcaaaaaatatattaacctctgaagacaaat
aatagaaattttatcgcgcatgtgtcaatctaatcactgtNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgtc
atggttacttttgtcttcgttgattgcgcgctgaatagaatctcgattcg
tcggcacagcgtcaatatatgattttgacctgtgctattcacggtatATG
TTAAGCCTTCTTATTAATGAATTTAATCATTTTACTCCGAGAAAGTAAAT
TTCACGTAAGTTTCACGATTTTTGTACCTTGGAAATAATCTGAACAGGAT
TTTTTATAGTATCCCGGCTGATGATAATACTAAGATGACATTAATCCCCT
ATGGttagaaagaaattttaaattttcaggagCTGATAGTTTCTTTAGAG
TCCCCCTCCCCTGTTGAGTGGATTAAGTTGACTTTGGAGCCATGCTGTCA
TCAGTTAAATGGATAGTAAAGGTGGGAAAATAAGGATGCGCATTTACAGC
CGTAATGTCGTTATACTTATACGTAAAAAATTGGAGGTAACGTTTCTGAA
ACCGTCAGACTTTACCGAATTTatactcttttcggcaaaaaaaaaacagt
ttgtGAATTTCTTCGGGTCTCAGATCGTGATTAGTCTCAGTAGTTAGATA
TCTCATTATAACAGTTCTCACTTTCTCTTTCCAGGTCGATGATTTGGGCT
ACTTcattagaaagaagaaaacagacaCCGAATTTACGAGTCTTTTCATT
TCTAGCAGTAAAATATGGTACGGTTGTCTTATGTTTGGTGGAGTTACTAT
CGGGCTTGGCATTCTGGGATGGTTTTTGAATTATGGGATAAAACACAGAA
AATTAGCACGAAATAAAGTTGAAAAACGAACAAACGATGACAATAACACT
CGACCACCAGTGAAACCCTCCAAATGGATTGGTTTTTATAATAGCCAATA
TAAAGAATCTTGAACCTTGTAATCTTGCAAACCAAAGCAAAATCACTGGT
GGATAGTAGGGTTAACCAATTTATTAGGTTAACCCCGAtcttcattaatt
tttgcaaaatatttcagttgTCAAatgattaattatttttttgacattta
caTTAACGTTGGAgattaccttattggtatatattttcgcgtgttacaag
agttttttggtcaattttcgcgaaatttaataccgtttaaatttttcaaa
attacaaaatcgcgaatttaaatacacgcaaaaaaatttttcttagtatt
ttgttagtatttttacatcaaaaacgttgtgtttcaagcaaaatcagtct
ttttcttgctNatttttcttagtattttgttagtatttttacatcaaaaa
cgttgtgtttcaagcaaaatcagtctttttcttgctttata

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00052176	TCONS_00052176	Clytia hemisphaerica	transcript
TCONS_00052177	TCONS_00052177	Clytia hemisphaerica	transcript
TCONS_00052178	TCONS_00052178	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00052178-protein	TCONS_00052178-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_212	supercontig	scaffold_212:32938..43428 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05	0.11	0.04	0.06	0.18	0.12	3.63	3.78	6.18	5.52	4.47	5.32	2.98	2.79	0.04	0.06	0.73	1	5.44	11.82	2.59	2.9	0.51	0.86	1.54	2.25	0.28	0.19	0.06	0.15

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XLOC_033041 (gene) - C. hemisphaerica