XLOC_037779 (gene) - C. hemisphaerica

Overview
NameXLOC_037779
Unique NameXLOC_037779
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_333:438663..443636-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037779 ID=XLOC_037779|Name=XLOC_037779|organism=Clytia hemisphaerica|type=gene|length=4974bp|location=Sequence derived from alignment at scaffold_333:438663..443636- (Clytia hemisphaerica)
TATACAGAAGCTTTATTTAGAAGCCTTATTATGCAACAGGTCAATGGAAT AGTTTTAAGAATTTTTAGTCATCGTCTTTTAAGTAATTTGTTTTTTATAT AAACACAAGGAAATACAGTACTGTTTTGATCAAACTATTCATTTACTGCT GTCAAATATCAAAGAGTTTTTGATAAAAGAGAGGAGAATTTAAGTTATGA GAAACTAAGTTATGAGAAACTTATTTTGCTAGTCTAGTGATGTTATGAAA AGAGTGTTTTCTCTTTAAGGATTTAGACATAGTTTGGACAAAAGTTTATC CTGAGGTTTGAAAGAATTATCCTTTTTCACGTGATTTTATTAACACTGTT TTCGTTTTCTATGAGAATATATGATTTGATTTTTTTTTTCAAGAATTGGA ACTTTGTTTATGATTTTGATAAAAGATATTTTTTGAAGTTTTGAAAGTTG GACACAAAAATATAAATTATAGAAAATTTTTAAAGTTTGTATAAACTTCG TAGTGTATGATTTGGTTTGACATACGTACAATCGCATACTGTAATCGTCT CCCTTTTCGTTTTTTATTTTAGGTGTTTTAACAGAATTAAAAGGAGGTAT CATGGGATTGAACCGTGGATGAACAAGTTTCAATTTTTTTTTAAAACATA CAAATAAAGTCTATACAAGTGATTACAATCTGGAGTTAAAAGCAATGGCA AAGAATTCATCCTCCTTGGAGCATCGGAATAAATTTGAACCGAATTATTT TTATCAATTTCGTTTGATATTGATTGGAGACAGTACTGTTGGGAAGTCAT CATTATTAAGACAATTTACTGAAGGACAATTTATACAAGCTTCAGATCCA ACAGTTGGTGTTGATTTTCATGTGCGAATCATTGAATTGAACGGTAAATT TATACATTATTATGTGTATTCTGTCGCGATGAAGAGGCCTCGTTTTTGTC ACTATCAATTGCCTCTTTGCTTTCCATGTGCTGCTCTTTTTTCGAATACT TCAAATGAACCCATTTACTCTTACTATCTTCCTTTGCTATTACTATCGTT CGATAGTAAGACTTGAGTGCAGGGTAGAAGCAGTTGTCCGCAATCTCATT GTTTGAGCTAGATGTTCCAAAAGCACGTGTTCTTTTGGCGACGAGTCATG CACCTTCCGTAAAGGGGTATATACACATACCTAGGTCATAGCTTACTGCT CAAGAAGGCTTCTCATGCGATTAGGTAGCTATGGAAATCACTCGATAACG ACACAAGTGAATGTCCATACTTTTTTGACGTCATTATCTTATTAGAGAAT ATCTATAGAATTACTTCGTTAAAAAGCTCTTAATAAACCTGATTGAATTA ACGCTGATATGATTGACGAACAGCTCGCGTCATGGCTCAAGTCTTTACAA CTTTGTCGAGAATACTTAAAATGCCAGGATTAAACCTTGATAAAGCTTGG CTTTTAACACAACACCATTTTAATAACACGAAAACCCGCAACATACTCTA TGTTTACTTTTTATATTTATTCGTTGAAAATCTTGTTTGTCTTAAACTAA CAATAAGTCAAACCATTAAAGTATAAACTGTACGGAGCCATATCACGTCA TGAACATACATAGACTGTATGTATGGGGCCCATTTTTCTATTTCCCTTAC CTTTAAATGTGTCTCATGTTGAATATTTCCAAGAAGCCTCTGGCATGAAA CAAATTCTTGGTCATTTTTTTCTTATATCACCGGTGTTCTGCATCTTCAA ACTCCAACCTTATTAGGGCAGCATAAGGTGTTGACAAGACTTCCTACCTT TAAAACTTAATAATTTGAAAGCTGACTTTGAAATAGAAGAATTTGTTGAG AAATGACTTCTTTCTTTCACCTATTCCAATTTTTGTGACAAGCTAGCATG TTATAATTTTGATACAGCATAAGCATTTTTGTGCTATTTATTTATTTACA GATAAAGTACGTGTCAAACTGCAGCTTTGGGATACAGCTGGACAAGAACG TTTCCGGTCTATAACCCGGTCATATTATCGGAATTGTGCTGGTTGTCTAG TTGTATATGATATCACAAATCGAGAATCGTTCGATCACGTGAAAGAATGG CTGGAAGAAGCACGTTATGCTACGGAGGACCAAGATATAGTATATTGTTT AATCGGACATAAAGTTGACTTAGACTATCGTAGGGAAGTCTCCACTTCAG ANGTAGCTATGGAAATCACTCGATAACGACACAAGTGAATGTCCATACTT TTTTGACGTCATAATCTTATTAGAGAATATCTATAGAATTACTTCGTTAA AAAGCTCTTTAAACCTAATTAAATTAGCGCTGATATGATTGACGAACGGC TCGTGCCATGGCTCAAGGCTTTACAACTTTGTCGAAAATACTTAAATGCC AGGATTAAACCTTGATAAAGCTTGGTATAATAACACAACACCATTTTAAT AACATGAAAACTCGCAACATGATGTTTACTTTTTATCTTTATTCGTTGAA AATTTTGTTTGTCTTAACTAACAATATGTCAAACCATTGAAAGTATAAAC CTTACGGAGCCATATCACGTCATGAACATACATAGAATGTATGTATGGGG TCCATTTTTCTATTTCATTTACCTTTGATACAGCATAAACATTTTTGTGC TATTTATTTATTTACAGATAAAGTGCGTGTCAAACTGCAGCTTTGGGATA CAGCTGGACAAGAACGTTTCCGGTCTATAACCCGGTCATATTATCGGAAT TGTGCTGGTTGTCTAGTTGTATATGATATCACAAATCGAGAATCGTTCGA TCACGTGAAAGAATGGCTGGAAGAAGCACGTTATGCTACGGAGGACCAAG ATATAGTATATTGTTTAATCGGACATAAAGTTGACTTAGACTATCGTAGG GAAGTCTCCACTTCAGAAGGAGAGGCTTTTGCGAATGCACATGGTATGAC TTTTATAGAAACTTCTGCTAAGATATTATGTAACGTTGAAGAGTCGTTTA TAAGTGTTGCACGTGAGATATACTCTAGACTTGAACTTGGACAAATAGCT CAAAAAGATGGATGGGACGGTGTAAAAACGGTACCTTTTCGCCCTGGTAA TGTTTATTTATCACAAGAAACCCTTAATGAAACAAATCAGAACGATAAGA AATGTTGCCGGTGAACCTATTACTACTTATGATTTTTTAGGTATTCGTCT GATTTTAAAGATTAGAGATCGCAAAGATATTATATTGTTCGACGTTTAAT CATCAAGCTCTGCAGAGCTCTGTCTTCATTTTATTTTTGCTATAAAACGA CGAAGTTTCTCTGGAGTAGATAAATGGAAGAGTGTTCGAAATAAAAATCG GACAAAAAGGAGTAAGATCACAGAATAACTTAAATAAAACACTAGATGGA GCTACTCTGTATTTCCCAAGCAGCGGCAGTTGAAACAAAATAATGTGCCA TCTATGTTGAGTACTTTTGGTACCGGNAGCGGCAGTCGAAGCAAAATAAT CTGCCATCTTTGCTGAGTACTTTTGGTACCGCCAATTTGTTCAACCAAAC AAAAATACCTGCATGACGCGAAGCGACGGGGCGAGAGAATACACAGGTTG CAAAATGAAAGTCTGAAGACAAATCACGCTTTTACTCGAAATTTTTATGG GCGTATTGCATGACATTTTTTCTGATTGGTTCAAAAATTTCAGCCAAAAA AGATCCAAATTCATGTCTTCTGCATAAAATACGCGAGGGTGATCCAAGTA ACATGGTAAACATTTCGAGTAACCACATGTTTTGACTGCACTGATTAAAT TGTGCAACCCGTGTATTGACTTGATCATTCAAATTGCCGGCACCGAACTA TGGCCTACTTGTCAAAGATGGCGGAATATTTTACCTCAGTTAGGGATAAA TAAGATTCATGTAGTGTTATATATAAGATATTTTTGAGTTCGATCCATTC AAAGTCTATGGAAAGTAATGAGATCCATTTTCGAATTTCAACACCTCTTT TCCAATGCCTTCTTTTCCTTTTTTACGGTCAGCTCTCCCTAATTCGAATG GAAATTCAATTTTTCTTCAATTCAGAAAACGTTTCGAATTATAGAAAGTA TTCACTTGACAGGAGCTTGAAATGGAGAAAGATTCACATAATTCTTTGGC TCGAATCAGCGGAAATTTTTATTTCTTCCTTATTTTTTTTTTACATTTTA CCCTTATCTTTAGATAGAAATTTTCTAGATCTTGAGTTCCATTTTTATCT GATTTCTTACCCTTTTGTGCAACCAAAGAATGGTTTTATTCATCACGCCT AGTGTCCAGAAACCTTGGTAACCGTGATTCCCTCAAATAAGATTTTTAGA TCTTTACTCTCGGGTACCTAATAGGGTTTGGAATAAGCCCCCACCTTCCG GGTTGGAAAAATCTCAAAAATTAATAAAAAATTAATAAAATAAATAAAAA TGTCTTGGGTAGAAAAATAAATTAGCCCCCCCCCCTGCTATTAGGTACCC GAGAGTAGATTTTTCAGGTTTTAGGTGTGGTTCTCTTTTCAAATTTGAAC CTAAAGCTAAAAAAACACGTACTTTTACTACAATAGTTATGGTTCTTTGT AGCTAAAACAAAATTTTGTAAGGCTGCTGGCATCCACTAATCGATTCGTG CCCCTTTTACCTTTTACTACATGTGGTTTTGCAGAGGTCTGCGATTCAGA CTAAAAATTTTGTTGAGATATTGGTTTGCTTTTGTGTTTTGTTTATTTTT TTCGAAAGATTTTATGAGAATTTGTACATTGAATTATAATAGGTATTATA TAGAATTTCTATATGTATAATATTATCAATATTATTGTCAGTAAAAGTTG TTTTTATCAGTGTATCCCAGTGTAAGAATGGGTACTGACCACATACACGT TTTTTCTTTTATAACGTTTATAAGCATATACAGGCTCAGTTTTTGGTACA CAAACAATGGCTCTATTGTTTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060064TCONS_00060064Clytia hemisphaericatranscript
TCONS_00060063TCONS_00060063Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060063-proteinTCONS_00060063-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_333supercontigscaffold_333:438663..443636 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RAB39Aras-related protein Rab-39A Homo Sapiens
RAB39Bras-related protein Rab-39B Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.08 7.41 3.44 2.57 13.21 10.59 12.1 13.98 6.72 8.39 7.38 4.59 6.47 5.15 6.15 6.93 14.81 7.89 4.52 5 11.59 10.65 10.23 10.8 10.7 15.7 5.74 4.51 10.8 9.34