XLOC_033177 (gene) - C. hemisphaerica

Overview
NameXLOC_033177
Unique NameXLOC_033177
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_214:159619..168565-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033177 ID=XLOC_033177|Name=XLOC_033177|organism=Clytia hemisphaerica|type=gene|length=8947bp|location=Sequence derived from alignment at scaffold_214:159619..168565- (Clytia hemisphaerica)
CGAGGTTTCGCAGTTCAGTAGCTCCCAACTTAAAAATAATATGCAACTAT GTTATAATTTGATAATATCCGATACCAACTTCATCAGTGTACTCTATTAT TTTCCGCGTAGTTAGTTATAGTATTGTGCTTTTAAGCCCGACTAAATCTA GAAACCACCGATCCCTCTACCTACCTGCCGAAAACACGAAGAACAGAAGA AAGTTCTCTTTATATTCAACTACAGAAACTGAAATGGGAAAACCACAGAG AAAAAAACGAACACACAAAAATATCAAAGATTTCAAGAAGAAATTTCGGA CAAGGAAAAGAACAAAAGATATCGACGAAGTTCACGAAGATGTTGAAAAG AAATCTGATGCACTTTTACATCAAAAAGTGGACTCTGACCTTCCTGGACA AGGCCAGTTTTACTGTTTATTTTGTGCGTAAGTGGATACTAAGTTTTAAT TTTTTTACATTTGCAGCCCAAAACATTTTTACTTTTGTTGTCAGTATTTT GTTTTTTTTCGATTTCAAGAAAGATAGACAACATCTGGGGTTTGTGCAAA AGAACAAACGTCATAGAAAAAGCTGATACATTCATGAATGTAATAAAGTT ATTAGATTTTCAATCCTAAACAGGGTACTGATAACTTCCAGGGCAGGGGA TAGTCATTTGGGAGAACGTGACAGTCTTTTGAATACCGTCAATTGCTCTA ACTTGGGATTATCTGACATAACATGGGACTGCAATTCGGCCACGACCACC ATTTCACAGAACCTCCAAAGTCATTAGATTTGAATTAATGAATGGCGTAT TAAAAAATACACGATTTCTCTTTCACACCGAGTAGGCTTTTAAATCAATA TGAAAATAATCTGTGTAGTGGAACACATACATGCGAATGTCCAGACGATC TCAATAGAACGGAATCAACAATCTAACCAGTCAAACTAAATCGAACGCAA TCGACCGATTGAAATTCGATTGTCGAATGCAATCGAATCTCCATCGAATT TTACAGTACCGCAATTTTCAGATTCGATTGATGTTAGTTAAGTTATTTCA TTCAGGTCTTTGAGAGCTTGGATGTTGGGAAGCTGCAAGAATAAAGCCAG ACAATCTCAATTGAGCAGAATCGACGATCGAACCCCAGTCGAACAACAAT CAAACTAATCGAATATTACCTAGAATTTTGACATTCGATTGAGATTCAAT TGCATTCGACAATCGAATTTCAATCAGTCGACTTGCGTTCAATTGCGTTC AATTTGGTTCGACTGGTTCGATCGCCGATTGAGATCGTCTGGCAGTGTAG CTCTAAAGCTCTAAAACAGCATCTAATAACATGAAAACCAGAATATGATT CTTCAATGGGAATCAAAACTATAAAGTGCACTTACAAACATCAATTTGTC AGATCTAACAAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN CTGTCATCATTGACAATAAAACAAACAATATTCTGTCAAGAGCCTTGTAA ACATTCCAACAACTTCCATCGAAATGATCTATCACAGCTCAATCTACCAT TTTAGCGCGGTCCGAGGATTGAGCCGTGAACTCTCGCAGAGCGCCCGAGC TCCCGCGTGGCGCGCACCACGGGGATGAAAAACTTCAATCTGTCAATCAT TTTCTCAAGCGAAGAGTACCCGAAGCAATTCTAGCTTTACGATAGTGCCG CGGATCATCAATGGATAGTATTCAATTATCATTATCCCTTTATTTTCATT ACTAGAACTTTTGCAAAAAAAAGGANNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTGTCC CGCCTTTGCGGGATTTTGGCCCAAGTGCTTGAGTGCAGCATAGGGTACAA AGTCCAAATATGCGTTTCCCGTAATTTTTGTATGAAGAGTTAGTTCTACA CTGTCTGGGAATGTCTGGAACGAAGAAAACCAAATTACAAGTGGCAAAAC GATGGAGTGTTTGGCGTCACTTGCGCGACAAGTTACACACTCGTTATTTG TTAATCCCATAAGGCGTTAGGTGGCGGGCGTTCTCTAATACTCCAATCAG CGTCTGTTCATTTTGAATGAAAACAAAAAAGTTGAAAAGGGCGCACTATC ACTCAGTGAAAGTTATCGTGACATGTCATGACAGAATGTATGATTGATAA ACTTGGTGGAGTTATCAAAACAAATTTGTTGTCAAAGAGATTTAAAACAG TAAGTGAAAATACATACAAGCCAGATATCAACAGTTCCATTTTTCGACCA ATCGTCCCAAGTTAGAGCAGTTGACGGTAACTAGTTTTAAAATTTGTTAC TCCAAAGTTAGTTGTTTAATGATAACTTACTCTCCGGTGCCTAATAAACG TACAGATCAAAATAAACGTACAGGGTCAGGGGGGAAATAATTAATTGGAA TTAATAAACGCACATGCTGAAATAAACGTACAGGCGAGAAATCAGAGCTG AAATAGATAAACGTACAGGCTAAAATAAACGTACAGGGAAAAATCTACCA ATTTTTAAAAAGTAGAGTTCAAATCAAATGCTCAAATTTATAGCAAATCA TTCAAATTTACTCGTAACATTCAAAATCTCCCACAATATGTTCAAATGTA ACTAACAACCTTTTCTACACGTCTTATTGAACAAAAAATAACAATTTTTT CCAATACTGGGTCAAAATAAATAAACATACAGGAGGGAATAAAGGTACAG GCGGGAAAATTCCTCAAAATGAATAAACGTACAGGTTCTAATAAGGTGCG TACAGGCGGTAAATTTGACACGAAAAAATAAACGTACATACTTATGTTTA TTAGGCCGCCGAGAGTACTGAATTAAAATATATTATAATTGATTTCTCAG GTAAATTTATGCTTGTTCAAATTTTTTGGTCATTTTCAGAAGCAGTTCCA CCCTCTTAGTTATGATGAACCATACATCAAAAGAAGCGTATTCTGATGTT GAAAATGAAAATGGCTGTTACTTAGCTGTTCATTTTTGCCTTTTTTGATA TTTTGGCTAAAAACCTGTTTTTCAGGCCATTTGTGATGACGTTTTAGTGA TTGATTGTTAACTTTGGTATGTATTTGTTTATGTTTGATTTTTTATTTCG AAGACCAGCCTACAGCTATGTTGAGATAACAAGACGCATGTAGATTTTAG AAGATTCTACGGTATTCTGGTTGCAAAATCTTTTAAATCTTTCGATGATG TCAGCAAAAATTGCAGAAAATCAAATTTTTGGAATATCTGCTGACATCAT AAAAATTTTAAAAAGATTTTTAAATTGATACAATTCTTGTGCTAATATGG CTATTATTAAGTTTTGTTAACAAGTTCTTGGGATATTCAATTTTTTTATT TTATGACGTCAGCACAAATGGCCTGAAAAACAGGTTTCAGGGATCGAATT AGCGTATCGCATTTCGCAATTCGCGATGCGGTTTTGGATTACTTACAAGC TAAAAATTGAAAATTGATCCATTTTAGGATGCAAAATCATGCTTATCAAA AAATTGCGATGCACCTTCTATCCTTATTTCGATGCCTGGGTTTTTAACCA AAATATCAAAAAAGGCAAAAATTAAATTCAAAAAAGTAGTAGCCATTTTC ATTTTCTTCATCAGAATACGCTTCTTTTGATGTATGATTGATCATATTAA GAGGGACGGAACTGCTCCCAAAAGATTACCGAAAACTTGGGCATGCACTA ATTTACCTGAGTTGTCTTTTGAAATACAACTTTCTTAGGGACAAGTTAAT TTATCACGTTTAGTACTGGCTGAGTGCCTCCATTTTATTTCTCAAGGTCT TAGGTTTTCATGGGTTGGCAAACGATATCATCTTCTTATTTTCTACTTTC CTATCTTCTATTCTAATTTTCTGACTTTCTCAAATGTTTCTAACTGTTTT AACTTTGTACTGTCGTTTTGCATAAGATTCTCATTTCTGCACTAAGATTC CTTTGCCACTTTTCTAGCAGATTAAAGACCAGTTTCATAAGTAAACACAA GATTTTCTGTACCTTTAGAAACAAACCTTTTCCTATCTCATGCTGGTTTA TCCAAGGAAAAATATCAAAAAAATTCTGAAAAAATGACAAGAATCTTAAA TGGGCATCTTATACAAAACCGAAGTATTTTTCTGAAATAGGTCTTCTACC CCAGCTTGAACCACCAAGTGCAAGCTCAACGCCCAACCGCTTGCTCTACA GCACAGAGACACATCAGAACACTGTCATTCACAAATATTTACAGCATGTA ATTTTACAGACCTTAACCCTTTTTCAGTCCTAGAATTTCCTAGATAACTT TTAAACCACAACTGCTATGTTTCTAAAATTAGTAGGAATGAATTAAAGGA AAACTTATAAAATAAAAATACATATAACATTATTGACAGAGCTGCTTCAG CTGCTGTAAAGGGAATTTTTTCAGCAAAAATAAAACTTATAAATATAAAA TAGCTGTATTATTATATTTTTATATCAGCTTTTGTACATCTTGAAAAGTT AAACCTTACATTGGGCTCTTCCAGAAAAAATCCGTTCATGGGGGGTGGAG GATATATTATTTTTTTCATGAATTACCCCTGGACACGGGTTATACCCCTG GACACGGGTTATACCCCTGGACACAGGTTATACCCCTGGACACGGGTTAT ACCCCTGGACACGGGTTATACCCCTGGACAAACATCAAATCAACCCCGTG GATACAAAAAATTACCCCTGGACATTGGAATTTACCCCCTGGACATTGCA ATTTTTTGGTATTTTTTCAATACCCCTGGACAATTCATTCTCCACCCCCC ATGAACGGATTTTTTCTGGAAGAGCCCATTGCAGATTTTGGGCCATTTGG ACAATATAATTTTTTTAAACAACCTCTTACAACCATCACAAATTTTGTAA TGTACTTTTCGGATAAACTCCAAATTTATATTTTAACACTTAAAATTTAT TTATATAGTTGTCTTTAATAAAAGTAAATGACTAAAAGTTTTGTGCTTCT GCACTTGTTCAAATTTACAAGTACTTTTTAGATCATTTCTCTTGTACATT TGAACAAACGCAGAATTGTACTTTTATTGAAAGAAAACTATATCAATTTC ACTTGGCTCTGGTATCTTGTTGTTTATCATCGAGCACTATTCAGTTTTTC ATGGCAATGATTTATTTTAACACTTTTTTTAACAAAGTTTTTGGCTCTAT GTAAGTTATAGAACTTTATATTTCACAGATCTATAGCTAATGATTTATGT GTTGGAGATATTAGGGGTAATTCACTTGTATGACACTAATAGATGCTTAA TTCAGGTTTATTTTTACATTTCAGACGCTACTTTATGGATGAGAAAACAC TGACAAATCACAAGAAGACTAAGAATCATAAAAAGAGGTGAGTTTCCTAA TTACTCTAGGGGCTGAGTTAGGTAGTTAGGTCCCGTATGCGCATCGGCGT ATAGTCATTTTTTCTTTTGATCATGAAAGTATAGTCATTGAAGAGTCAAA AAACGTGTGTAAAATTTAGCATAAAATTTCTGATCGATTGGTATATAATA TGCAGGGTTTTAAGCTCAAAAAATATTTTTCTTAGGCTAGCAGAGCCTAA GAGCCCATGTGACGAAAGAAAACTTTGAATCCGCCATTATGGATTTCGAA ATTCATGTAGAAAAAAAACTTTTCCTGAATTTTATTATTTGAACGCTAGG CAAGACCCTCCGAAAATTTCAAATAAATTAAGTAAGCCAATCAAATGTTA CAGCCACGCAAATCTGGAATCAAAAGTAGTCATTTCAAAAAATCGAAATC GAAAGTGCCTCATATCTCCAGATAACGAAATTTTCAGACCATGATTCTGA CCTTTTTCTTAATCAGCATAAAATTTGTGATCGATTGGTATATAGTATGT CTATGTTTGAAGTCAAAAAAAATATTTTTTCAAGCAAGAGGGCTAAAAAG GGTTGAAAATCTAAAATCCGCCATTATGGAAATTTGTGCCTGATCCAAAT AACGCCACACACGTTTTCTCACTCTTCAAGGACCATACTTTCATGATCAA AAGAAAAAATGACTATACGCCGATGCGCATACGGGACCTAACTCAGCCCC TAGAGTTAATCTTTTCCATCCATTTATGAAGTGGGAGATGATTAGGGGCC GTCCACATAGAATGAACAAGTACGTACTTACCAGAGGGGGGGGGGTATAG CCATTTGCGTACATTGTGCTATACAATGAAACACAGAATAGTGTCCTTAA ACCAATTTATACATTATATGAAGCATTATACATTATATGACATTATATTG TCAAATAGAACAATCAACTGACCAAACGCACACAGTTTTTTTCTAAACCC TCAATGTTTTCGCAAGCTCAGCATTTTTGTCATAGTAATTCAGACCTCCA TGTTTAACTGTCAATCTGGCTTTAAAAATTTGAAAAGTCTGATCTTAGGG TTTGAGTAACCGGTTCCCCTCCTCTTATTTCAATATTTTCCTTTACATAT GTGGACCTATCTTTACTTAGTTTTCCTAAATTGTGCACATTATATTTTAC TGGTTTGAAGCCTTTATTATGATGATCTATCCCCTAGAGATGCTGTTTTG AATCAATCTCCAAAATTGATTTTCTTCTCCCTTCCGCCAATTTTACCTAA AAATAATACCCTTTAAATAGGAAACTGTCACATCTAACTTGGGGATTCTT TTTTATGTTTCATGTGGAGTTCGCAGGATGATCAAAGTGGAGTTTTGGGA AATTTAATTTGGTGTTCAACATATAGGACCCATTGAAGCAAGTTTTACTG TGATATTTTTACCCCATAAGGCTTTTAAGTTTTTCTTACAAAAAAATGTA CACACTCTCGCTTAGAGCTTTTAATTTTTCTTTAGAATGCGGGAACTGAA AGATAAACCTTACAGCCAAGCAGAAGCAGAGATGGCAGCAGGTATGGGCT CGTTTACAATTCAAGTCACAAAACAAGGAAAGTCTCTCAATAACAATGTT TCGAAAGTCAAAAACGCTTCATCAGCAATGGATACTTTCTCGCCGGCATC CAGTGTAACGAGCACTTCAAACATTATGGAAGGACTTAATATAGGATAGC CGCTACTTCTAATTCTTAAATAAACTGGTATCCACCTTGAGCCTGTGGTC GGAGGTGTTGATCAGGTTGAGTTTGTGGCAATGGAACCCTTCCTTTTAGA GAAGTACGATATGAATAGTGGCTTGAGATGATTTGGTTTCCTAATTAGTT ATTAACGGGACTGTTTTTTTTCTTCAACAAACTGTGATGCAGTGTAAAGT GCAAATATCGACTACAAGTGGGGGAGAAGGTGCCTACTTCGCAACATTAA AAAGAACGACCGAAAGTGACTGTACGTATATTGCGTAAAATAACGACTAA CAGTTTATAAATACGCATGCGTTTTAACTTTGTTTTGAAAATGATGCGAA GTAGACACTTTCTCTATGTGACAAGCAATCATATTTTTTATAATTTGTTG ATAAAAGTTAAATTTTATGATATATTAGATTCTTATTTGGACCGTTTTTG CGCAAAAATATGTGCCATTTTGAAGTTTCCAATAAAATGGTAGCTGTGTT TCACCTAAATTTCCCTCGTGATCAAAAGAGCACCCATCTTGAGTAACGAA TTGATCTTTATTAGGTTTTTCTTGGTCATTTTTTATCCACCAGCCACGTT TTTTGTTAAAAGCAACTTGATCTATCATGTCTCCGACAGTTGATGTGGCT GATGCAAATGTCCCACGGAAAACCCACGAATCTGATTCCTTTCCTACTGT GACGTCCTTGTAAATGGCTATTAGATCACTCTCAACAAATGGATATGGTA CAGTGAAGCTGATTAGCAAGTCAGTATTTTGGACTCGATCTGAGAGTTCA TTTAACCCGATCCAGTAATCTGATGTAAAAATTCCATTCACTGAAGAAAG AGAAAATACTCTTTTTGGATATTTTAGTTGGCCAATGATTTCTCGACCAA AACCATTGCAACGAGCGTAGCGATATTTTTCTTCTGTTTGACTTTTCAAC GACATAAGATAAAAATCATTTTTTTTATTCTTGCATGATGATACTATTGA AAAATCAATCAGCCTTTCTAAATTAATTGCTGATATGAAGGCTGTACTGT TTTCCTTTCGAGTAAATATGGTACCAGATCGTTTAGTAGCAAACCAATAA AGTGAACAATCGAAATGATAACTACNTTGTACCAGATCGTTTAGTAGCAA ACCAATAAAGTGAACAACCGAAATGATAACTATCGAATCTTTGGACTTGA AAAGACATACAGTTTTTTGTATGGTAACATCTAGTGAGACAATTTTCGAT GCTATTTTCGTGGAAGTTAGCAAAAGGGTCAATAGGAAGATTTGTGTATC TATCAAGAATTTCAAAATGAATTCCATCCAATCTTTGAAATGACATTTGA CTGCATTGTTCAAGGATAACATTCTGAATAATAAGCGGGAGTACAATTAA AATCCGAAACTTCTTTGCTGTCATTGTTTCCTGAAACGACAATAATAACA TACCTAAACTTTAAAGGCTTTAAAAGAAATTTTGAATTTTATATTATATT CTCTTAAAAGAATAATAAAGTTTTAAAATTTTATATATTCAAACTTCACG ACAATTGATTTGATTTATATTTTGTAAGTTTTCTTTTTTCTTTGTATGCC GTCCGTTGCATAAATTATACTCAAGAAAGAACAAATGAAAAACGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052470TCONS_00052470Clytia hemisphaericatranscript
TCONS_00052469TCONS_00052469Clytia hemisphaericatranscript
TCONS_00052468TCONS_00052468Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_214supercontigscaffold_214:159619..168565 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.31 36.11 16.18 13.25 48.14 38.45 31.23 32.6 25.38 22.75 24.11 22.83 24.77 27.02 21.11 22.2 23.95 22.73 9.9 13.18 25.28 25.45 44.29 41.26 25.02 28.94 15.47 12.46 25.3 27.29