XLOC_033216 (gene) - C. hemisphaerica

Overview
NameXLOC_033216
Unique NameXLOC_033216
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_217:37789..44178-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033216 ID=XLOC_033216|Name=XLOC_033216|organism=Clytia hemisphaerica|type=gene|length=6390bp|location=Sequence derived from alignment at scaffold_217:37789..44178- (Clytia hemisphaerica)
TTAATCACATCTACAGGAGTATCACCCAACCAAAACGGCTCCCAATGTCC GGCTGCCCCATCANATTTACAGGAGTATTACCCAGCCAAAACGGCTCCCA ATGTCCGGCTGCTCCATCGCTCGTGGTTGAAGGTGAAAATTCATCTGATA TCAAAGTGACGTCACAAAAGGAAAATTGTTGAATAATTTTATAGGCTGTT GATGAGCCAATAATCCCTGCTCCAAGAACTGCTACTTTCATTTCAAGGAT GATAGCCTTTCGATTATATAACAGTGTAATAAATAGCCACGGTATCGGAG TAGTACCAGACCGGATGAACAACCGAGGCCTGATTTCAAATAATTATGAC GTTATCAAGCAGGTTTTCCTTCAATTTCTCAAAAAAGACAAACAATTCTA CATTTACTGTTTCTTTAGACGTATAAATTACCATGGGACCCCGTCCCACT GAAAAAATTGGCGAAAACATTGTCCCCGGTGGAAAATTTAACCTACAATT TTTGTCCCCACCGAAAAGAATCAAATAAACCAATCCTCACTGTAAAATAT TATGCTTTTTTTCCATCCCCACTGAATTTTTTGACTTGAAAACAAAATAA TTGAAATCCCCAGTCATAAAAAATATGGGAACATCAATCCCCAATCCTCT GTTATTTATACCCACTTGCTAAAAAATCCTACCGGGTCTATGAGAGTCCT TTATAGACATGCCATAAGTTACACAAGTTGGAAATACCATTAATGTTATC ACTTTTGAATTTAACATAACAACTCTTTTCTATTATATACTGACATAGTG AGAAAGTCAGATTATATTACCCTGATAACAGCTGTTCATAATTTTTCTTA CGCGCACGGTAAACCTCTGAAGTTGCTTGAAAATTATACATCTGACGAAA ATCTTGTTGTGCGCCAGAAAGTCAAAAAACTGATACGGCACCCTATTCAT AAACACAATGCACGCAACTTTGTTGTCATTCCTAGTCCTTTTAGACGAAC GCGGTCCTTACGATTTTGAGATTGCATATTCGTCAGATTGTTATGTTTTC ACACATTCCTTTAGAGCTTCAGCGTGGTATGCACAATCTGATCTCAGGTT ACATCCACAGGACACTTGAACTCGGAAAGAACTTTGGAAGAGGTGAGGAA AAAAGGGAGAGCAATCTTTGTTATTGATAAAGTTTGTTATTATTAAAGCT TACAAAATCTCTCTAAGATTCTCAAGTCACTGTAGTTGCAAAACGCATCC AGGTAGCCGATGTAAACGATATCTCTATTCGAATACGAGCACCGTGAATT ACACACCCCTGTCACCCCAACATCTCTGTCTCACAGTCATGTTGACACCT TTTGCCAAAGCGGGGATAAAAATTTCTATTGAGATCTCAATGGGGATAAA AATTATAATATTCCAAGGTTGAAAAATCCAGTGGGAATGGTTTTGGAGTC CAATTTTTTAACACTCAATTTCGAATGGGGATGAAATCAAAGTCAATCTC TCAGTGGGGCTGAGATTCTAGGGTATTTTTCCAACCGGGACGAAATTTTG CCAAACTCTTCAGTGGGGCGGGTGTCCCAGCAGGTCTTTGACACAGGGGT GTTATTATCAACGAAGATGGATACATAAGTTAAGTCTTGGCTGGAATAGA TACGATGAACACCGTAGCTAAGCTTTCTCTAAAATTAAGCTGTGGAGACA ATCACATCAATATCCTAAGAATAGAAGATGAGAGAGCACATATCCCCATT TTAAGCTCAAGTAGATTTATAATTCTATATTTCCAGTCATTTATAACTCT TCTGAAATGCCGATAGGCGTAGCGAGATACACTGCATAATTTATGGTTGA GAGCGGTTTTTACGACACTGTAATTATTATCTTTGTTTTATCAAAAGGTA ATCAATATGTCATAAACATCTGCACTCCCTCATAAATTTTGCAGGGTATC TCGCTACGTTTATGCCTCTGAAAGATTTTACACTTATCCATCTAAACTTA CTCTACACAAATCACAAAGATAAAATACATATTATTGCAGCTACACATTG TCCATTCATGGATAGTATTAGATGATAATATCAAGTCGAAAACCTACAAA AAGAAAGTAGACCTCCGTTTCAGATATCAAAATAAACAATCTAAAAAGGA AATATGATTCCATTATTTTCGTTATTTTGATTTTTTTATCGCTCCTCGTC AGACACGGGCAATTTTCACCACTTAGGAGCAAAGAGAGCTTTTTGAATCC CTGCTGAATATTTGAGAAACAGCTGAGTCTCTAGGCTGATTGCATTCTCT AACGAAATTGTGCTTCTTTTCAATACTACCTTGCAGAGGTCTGCGATTCA GAATACCGAGTCTCCAGAAGTCGAACCTCTATTACTCAAATGTCTCCTTA ATTCGAACAAGTTTTCTAATCCCTTCAGTTAACAATGCCTTATAAGCCAA TCTCTATAACTTGATATTTCCTTAACTCGAACAAATTTAAGTTCACCGTG CGTGTTCAATTTACAGAGACTCCACTTTACTCCTGTACACACAATGGAAT TTGGAATCCCCATCAATAGATTACATTTTTCATTCCGATATCCCGAGTTA TCATTCCGTCTATACCATGAACATAGAAGCTGTTATCACTTTGACCTAAC AACAAAATTTTATGGCTTCGGGAAATGGGCTTTAGATTTGAATTCCATTG TTTTTCGAACCAGAAAATTCAGTAGGGATCGACAAAATAGCAAAATATTT TGCAGTGAGGATTTGCTTATCTGATTATTTTCAGTGGGGAAAAAAATTGA GTAAAATTTTCCATTTGGGGCGATATTTTGGGTCACATGGGTCTGTTTCT TACAGAGCTGGGGAGGGGATGTGGGTAGCTAAAGCCTCACTTTATTGCAA AGTAAAAGATCCGTCAGTAACACAAAATCGTGGTAAAAATGGCTCTGGGT ACAAGATTACGTTTTTTATGGCATCCCTGTCTCGCATCCCCGATGGAACT TCTTCCAACAGTAAATTGGAATGTTTATATCGAAATCCCGAGGGGATAGA AAACTTATTGTTCCCAGGTCGACAAGTTTTATGGAGAACAATTTTTTCAT ATAATTTTAAATGGGGATGAACACAAAGCCAATTTCCCAGTGGGGCTGAA AGTAGAGTTATTTCTAATTTGGGCCGAAATCTTGGCCAAATTTCCCAGTG GGGAGGGGGTAACACCGGGTCTGTGACACAGGGGTGTTATTTGGAAATAA TTTTTACTCCAATACGTTACATGTTGAACGGTGAAAAATAATACAGCTTT TACAATGACTTTTTATACGTTATAAACATCGCAGAACCAACAAGAAAGAA AAGAATTTCTCAACCAGGAAAATTGGATATTTGTGGTTGCATTTTATGAC AATTGATGTTTAATTTCGTCAAAAGTATATAGCTTTCATCAAGTAGGAAG TTAAATCCAAAAAACTTTCAGTACAATTTCTTTGTAACGTGGCTCTTTCT TGTACTGTAGTGTTGCTTCTCGACAATCGCAAATTTGATGTTTAAAAAGC GGTTGTCGTCGCTTTTCCATTTATTTGGCCACTAAAAACTAAACTGCTCC AAATTTGTTTTGCAGGATAGTCGCTTCATTTCCCATCCAAAATATCTCTT TTGTGTTTCGGGTTTTAAACTCAATGGTAGGAGCATCAGTAGTATCAGCT AGCTCACCATTCTCATAACAGATCATCCATTCTGTGCATACCACGCTCTA CTCTAAAGAGATATGGCGAATGTTGTGATTGACGCTTGTTTTGCTTATTG GCCAATCACCGCGTTCCAATTTAATATTCATCCCAAATCTGAATGAAAAG GTTGGGTAGATTCTCTTATGAAGCCATGGCCATTAGAGCTGGATACGTAT TATGCGCAGAGTAACAGAATCTGCTAGCTAGAGATTACTAGCTAANAGCC ATGGCCATTAGAGCTGAATACGTGTTATGCGCAGAGTAACAGAATCTGCT AGCTAGAGATTACTAGCTAATTTGCTAGTGTGTACAGAGCCTATTATTAT CAACATTTTTTCATCTTGTCTACATAGACCCATATCATGATTAATACCTT TTTGTGTAAATGAGCTATTAATTTTTGTAGAAAAAATTGCTTTCTGCTGA AGCAATACAGTTTTTGACAAAGAAATGCTGTTTAAGTGATAATTCGGTTT TAGAGAAAGAGAGAAGCTTTTTTGATGCTATGGTTGGCATTTTTATTTGA TTTTGTATTTTTATTTGTGAGCTTACTACTTTAACATGCCTTTCTCTTTT GACTTAAATTCTCTTGTCAACTTTGTATTAAATATTTACTTCGTGACTCT AGTTCAAATGGATACAGTAACATTGCTTTGTTTTTTGTTGTCCTTCGATG ACACATCGCATAATTTAATACGCATGACTTTGCAACTATGCATTGCCATT AGTTTAGTTTTGTGACGTTCTTTGATTCAAACCCAGAAGATGGAGAATGT GGTCTTTGTAAGTTCGATGAACAGAGCTACAATAACCAACCCTGGCTTGA GGGCCTATAAACATCTTAGAAGACCAAGTCATATTGTAAATCGAAAGCCT CAAAGCAAAAATTATACTTATTCAGTGACTAGGAAATCCCACCAGGTCAG GAAAACAGGGTTTGTTATAGCATCATCTCGTCCAAAAAAATACACCACTG CCTCACAGCCCGGTGGAACTTTTTTTCCTCAGTGGGGATACAAATTTCTA TTGAAACCCCAATAGGGATAGAAATTCTACCGTGAAGTCGGGTAACTTTC ATCAGTGGAGGCTAACATGCATAGCCCTCAAATGACTGACCAATCAAAGC AGCAAAATTTCAAAACAAATGAACTACGCAGCTTCGCTCGCAGCTCTACT CTACCATTTTTGTTTTGATTTAACTTTGTATTTTAGGGACCAGACAGGTC ATTCATTTGAGGGCTATGCATGTTAGCCTCCACTGATGCAAGTTACCCGA CTTCACGGTATAGTTTCAAGGTTAAAAGATCCAGCGGGCATGGTTTTAGA GTGCAATTTTTAAACATGGAAGTTCGAATTGAGACGAAATCAAAATAAAT TTCCCAGTGGGGCTGAAATTACAGGTTTTTTTTCCCACCGGGGACGACAT TTTTGCCAAATTTTCTAGTAGGGCTGGGGTCCCAGTGGGTCTGTGACACA GGGGTGTAAAAACGGTGAGCTCACTTGGTATTTTAATTCGTTATTCCAGA TGATCTTACATTTCAGACTTTTTAGTACAAAATGAAAGACGAAGCAGCCA CAAATAACAAATGTCAAGCTTGGACGAAACTTATTTTCAACCTGATCATT TTTATTCTTCTCATCATTTCAATGACAACAAAACCATGGGGTGTTTTAAA GATCGAATCAAGTGATAAAGAAATCGGTAATTTCGGATTATGGCGAGCAT GTAAAATGGGGAAATCGGATACGGGAAAAGTATGTGACGATATATCAGAT GGTAATTTCACAGTATTTGCTTACAAGTCCAACCCGTCTGACATCGACGT TAAATTCGGCAACACAATCGAAAAATTGTGCATTGAATTCCGAAATGAAA CCGTTTTGAAAAATGGTACAAACACGACAGAGTTACAACCTTACAATAAA TGTATTACTGAAAGATTCTATCAAAAGGTTGAAGTGGAGAGACTTCGTGT ATTCATTATTCTTGCCACCGTCGTCTCATTTCTTGTAACCTTTGGCCACA TCTTTGGTATGTACAAAGGTCAATCAAATGATTTTGTACCTGCGGTGGCA TCATTGTTGATTCCATTATGGCTCATTATCGGGCTTTCCGTATTCCTTGG ATTTTACGGTGGTGACCATTTCCAGCTTGTAATGCTTGAATATGGATGGT CCATGATTTTAGCCTGGATCTGTGCTGTTTTGAGCTTATTAAACACGTTA TATATGATGTACACAGCTTTTACGTCCGAGATATAAAGGAAGATCAATCT TATTCTTATAATCATTACAGGCTATAACTATAGCTTTCGGTATTATTTTC TGTTACATAAATTGCAACTTTATGTTGGTAAATATTGGTGACAGGAGGTG GAATGTGAAAAACGTTTTTTAGCATTTAAAGGACAACAATCAATCAATAT AAAATTGAATTTTTTAACATATCATTTGTAGAAATAGCAAAGCTGTACTT ATTCTTAGATTTCAATGAATGTAATACCTTTCCTCTACAATAAAAGTCAT AATATTAATATTTTTTTCAAATATGCTTTGCTAAATTTTAAAAACCACAT GATTTTAAGTGCTCTAAATTACTTCTGGAATGTAGAGTTTCAATGTTCCA ATAAGGTTAAGAATATAGCCTGGAAACCACTAAGTCCCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00052528TCONS_00052528Clytia hemisphaericatranscript
TCONS_00052527TCONS_00052527Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00052528-proteinTCONS_00052528-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_217supercontigscaffold_217:37789..44178 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.82 5.61 5.76 5.35 0.86 0.53 2.55 3.33 13.25 8.79 13.69 8 16.05 12.97 6.35 6.77 9.52 9.37 6.44 9.29 15.66 15.65 9.85 11.62 13.53 13.58 42.89 29.85 0.78 0.87