XLOC_033630 (gene) - C. hemisphaerica

Overview
NameXLOC_033630
Unique NameXLOC_033630
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_228:18313..26029+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033630 ID=XLOC_033630|Name=XLOC_033630|organism=Clytia hemisphaerica|type=gene|length=7717bp|location=Sequence derived from alignment at scaffold_228:18313..26029+ (Clytia hemisphaerica)
tttccctcgccactctaaccgtagccgtagagaattccagatacataatt tTGCTAGTGGaacgaaaccgtttcgatctgatTTGcgttgtaacgtcttc ttttttgacgttttgaattttgacgttcacacttgtttcagGACCGTTTC GGAatggaacggaacggaaccgtagcttctgaacatggtcttagttTAAC TTACGAGAAGTTCGATTGCTTACCACAAAGTAAGAACtgacttttttgaa ttttgtttaatttaaagaatttcttttttgcaGAGAAATAATTACTAACA AATAGATGAATCAAAATGGTGACTTGAAAACTACAGTGATGTAATGAAAG GATGAGGTTACAATGGAAAATGAAAGCGGTATGTTTTTTTACCCGAAATT TGATAAATCCGTTGTATGTATGTATATTATGTCAGGCAATAAAGTgcaag ttttggatttttagAAGAATATTTAAATCACACTTCTGATCTTTTTGCCT TTTCCGGGTGTTTCAAGAATATGCGaataaaattttacattttcctACCA AATATAGCAAGAAACTTTTAAATACCTAAAAAAACTGCATTCTACTTCTT TACAGAGAGCCAAATACTATCTTGTCATCATATTGTGCATGGTAGTTCTG TATTTGATCCATCACAATAGCTACTACACAACACCTGATGCCTTTAAATA CGATCACAAAGAGACCAAATCCAGTGCACTGACCACAGCAGCTGAAGACG CATCCACTGAAATTAAAAGCGTTGGAAGCAAGTATTTTGTAGATGAAGAT TATTTTGGTCTCGTTAAAACTGAAGAAGAAGAGAAGAAAAGAGAAGAAGG TtacaaaaaattctcatttaaTCTGTTGGTGTCCGATCGAATTGGGTATT ATAGGAGTATACCGGACACTAGGAATAAATTGTAAGTATGCATCCTTTGT CCATTACTCTCTGGTACCTGTggtctctttttgttttgaaaactttgact CAGATTGAGACTAggattcatgatatgcaccactacaatgtcttctgaca ttacatcacagcCCCATCAGCTCATTGCTTGCTATTGACGTACTGACGGA TTTACGTCACATACAACCAGCTGTTTGAGTCCGTGCAGTCCGTggtgtaa tgtcagaagacattgcaatgatgcATACCATGAATAGCAAATCTAAAAAG GGCTTCTTTAATTGAGTATGAAAATTAGAGAGAGAAGCACgtgttttatt gatttttttactACTGAAAACCAATGCTACCGACGATAATTATGCAATAA ATAACGAATGACTTAAAGGATATCAAAACGACAGCTTCTACATGTTGCTT TTCAGATGTAAACATCAATGGAAAACCCAGGGCTCACATTGTAGCATCAT TATCACGTTTCACAACGAGGCTATTTCAACGTTGCTTCGGACAGTGGGAA GCATTCTTCAACGTACACCACGTGACCTCGTTAAGGAAATCTTATTGGTA GATGACTTCAGTACTGAAAGTATGATTCACACCTTTTTTTAagaatcaga aaattttgactcaGGCTGGGCTAGCTtaggtttttgaaattttcagcctt gattgtttttaaaatgttcttattgtaCATGACTTTAgaatttttcattc attttgagCTTGTGAATCGaactagtatttttgaaataaagtgGTGAATT TACGACAGTTAGTCTTCAAAAAATGGTATAATGTTTAATCTTTCAGCAAA TATCGAAAAGATTCATTCTTTCAttcaatcaacaaaaacaaccaCCGTAA AACTCGTCCAAGCTCACAAACGCCAAGGTCTCATACGAGGTCGTTTGCTA GGTGCCCGTGCAGCTGTTGGTGACATTTTGGTTTTTCTTGACAGTCACTG TGAAGTTAATAGTCATTGGTTGGAACCACTTATTGAAAGAATTCGAGAAA ATCGTAAAAATGTTGTTTGTCCAGTTATCGATTTAATCGATTCACATACG TTTGTCTATTTGGCATCTCCGATAGTTAGAGGTGGCTTTACGTGGAGTTT GGCTTTTGGCTGGGAACAAATTCCCGAAACACAAAAAGGAAACCCGAAAA AAGACCCATTTAAGTATgtcatttcaattttaaatgatATGAGAGTTAAA ATTATATATCATAGGGATAActataaaaaaatttctatgGATTGACCCAG AACGAAAAATGGTAAGAAAGTGATGTTGAATGAAAATAATTAGGAAGTAA GTATACTAATCTGGTGGCTGACAGTGGAGCCGGGATATAGGGAGTCtgcc ttttctatttgcgctagactgGAGGTTGAATGTTGAGGTGgggcgccaca cctactctcactTCCCCGTAGCTTACCGCCCATCATCAGATTACCTAACC TAAGCTACTCATTTGCTGAGTGGGTGGTGACCAGCGATCGAACCCACAAG CCTTGGTTTGCAAAGCGAATGCTCTACCGTTTGAGCTACCCGGCTGAAAA ATATAAGCTCTAGAATTAGCAGAAGAATCACTCACATCTGACCAAATATG aaccaaaaatttcatttttttctcatttttaggtCACCAACAATGGCTGG AGGATTGTTTGCAATGGATCGCAAATACTTCTTTGAACTTGGTGCTTATG ATGATATGATGGAGGTTTGGGGAGGAGagaatttggaaatttctttCAGA GTATGTTACGATAGTCGCAATAAAGTCTGCCTCGATATAAtctgctcgtt gaaaagatgatAAAGAGTTGGGtattattgaaaaatatcaaaaaacattg gaaagtaaaatgaaaaaatgaaaaatgaagaattgtAGAATTGTAAAATG ACCGTCATTTTCATATTAGtgaatcttcaattttagagggttattacttt gaaaaaaattaggaTATATTGAAACAAACATATAATTGTTATAGAAAACT GACAGCAGGTGACAACAAATCCTAACCAATATACCTCGTAAAACTGGTTT TTGTTTcgatatattcaattttaaccGAAAAACGTGCGAACTTTGATTGA AATGTCATTTGGAGAATCTCATTTGGTTACAAGAAATCTATTAAGTGCTC AGTTTGTAATTCTTTAAATATGATTTATCCtttaaaaatttcaaccttAG ATCTGGATGTGTGGAGGAAGACTGGAAATAGTTCCTTGCTCACGTGTTGG TCACGTGTTTCGAAGCCAACGAATCGGTAATGCGCAAACTGATCTTTCAC ACGATGGAGAAAATGCAGTACGCGTTGCTGAAGTTTGGTTGGATGGATAC AAAAAACATTTCTACGCATCACGTCCTTCATTGCGCACGTATAAACCAGA CGTTAGCAAACGCGTGAAATTACGTAGGGATTTGGACTGTAAATCGTTCG ACTGGTTTCTACGTGAAATTTACCCTGAGATGTCAATCCCTGGTGTGAGA GAAGGCCAAGCTTGGAATGTTTTGGGCGACTCTAAGAAAAACGCTGACAA TATCACTTCGGTTGTATCGGTATGTTTAATCATCGCATGTTCAATCATTA CCCCAGCTCAATTGTTAAATTCTGTCCTAGGAAATTTATCTCTTTAAAGT CAAACAGTTTCTTACTGGGGAGAGGTGTAGTCTAATTTGTCTTGTCCAGT GGTATCGAACATCCACCGGGAAATTTAATTTAAagggtaattttttttgc ttccaaaggaatcaattttttacatttggcttataaatcaaaacttctcg taaaaaagattgaaaaaaatactttaatttcagaaatttgTATTTGGTGG GATTTTAATTTTGCGTATTATGAGAATAGAATTTACTTATAAGTACTTAT GGtttttttttcgcgggaatttaattttgcagctcagcaatatagatttt ttttcaaccattttatctagcaaattttagcaaatTCATAAAAATCACGG GAAAATCTTGGCCGCGAAAATTTCTGACATCAAAGTATAATGATATGCAC CAACCAGCctccgaaatttttttttatgatgacAGACGAGGCTCCTTATG ATTTTTAGATTGTAAATCCAAACAGTTTTCTATGTATGGCGGTCAAAGGG GCCAACGAGCCAAGATCGAAGTCAAGAATTGTTCTTGGGAAGTGTCACCT ATCCAAATACAAGGTAACGAGTCTGCATACACTTTTAATACGTCAAATAC TTTTCGCATCAAGACGTCTTTTTTTAAGCTGGCGAATCTCACAAGGAAAA TGGAGgaaaaaaatcgatgaaaatgaccaagaaTTGCCGCTTAAAAATCA GGTTTGCACCCCAGAAAAATGCTTTATTAGAGAAGGAACAACACCAAAAG ACACTCTGAACTGTAGGAAGTGCCACCGAGATGTTCATTATGATTGTTCC GAGCTACCAATCTACCAAATACAGATTTGCTTAACGTTTAAATCTCGAAG TTTTCAATGCCAAAGTTGCGTTAAGATCTCGCCAGAGCTGACTGAACTAG TTGAAACATGCAGAAACACCAAAATCGAAGGACttcaaaaggaaattaaa gcatgtgaaaacaaaatgaagagatttcccaactgaaatcaaatgatgaa ctttcttacaaaaggaatcaaAGAAAGCCTGGAAATAAAGATGAGCATAC TCGAGAAAAAGATAGAAACAAAGATCGAGAACATCTTAATCGAAGAGGCG AAAGAGGTTAGTTATCCTGAAGCTGTATCCAAACAGatgaatcaaaaatc aaataaggtGGAGAAAATAACTCGATGTGAAACAGCCGGCAATCAGCGAT CCACAGCATGTAACCTAATTTTCCATGGAATCAGAGAACATCTGGAGGAT CCCGAGAATACAACGAAAATCTACGAAGAGAAATTTATCAAGTACAGAAT CCTTGGTTTACAACTGGGCATCAAGGacataaaaattataaacacaCAGA GGATTGGAGTATTCACAGAAGAAAGAGAGGAGAAAGGGAATTATCGACCA ATCAAGGTAGTATTCGAgaatgaagaagacaagaacaAAGTCTTGAGAGC CATCACGACATACAAAGGCCCTCCTTCATCCTATCGAGCAACAGAAGACC TCACAATTATTGAACGATTGACAATCAAAGAATTGTGCAAGTGAGCACAT GAGCTCaatgctcaaatgaaagacaaaaacattcaatttaaAGTCAGGGG AAGCCTCAGAACAAAACTTTACctaaagaaaattgtaacaaCAAGTGATT GTCTTAGAGGCCCACGGCGTGCCTTGAACCTCAATCctttaacaaataaa taataaCCTGTATAAAACCTCCATGTAAAACCATTTGTAGCGGGAGGGGC GTACGGGGTTGTTTGACTGATATCCGGAAAACCGAAGAATTTTACCACGA TTTCTGAAATTCTGCAAAAACTACCCTTTTTCGTCATACTGTCTAAATTT CACAAAAAGAGAAGAAATTCCGAATTACTTGAGCAAAAACTCTTCATTTC CGAAATTCCAGAGTAAAAAAGGATCGATTTTCGATACtgaacaatttcag aattccgaaataccgaaaaaGAATCGTGCTATTTCCAAAATTCCGAAGTA AAAAAGGTTGCTTTTCGATTTCCTTAGGACTGGTATTACACAGATGAGGA AGAAGTTCGTTTGAAGCATGGAAAGAATAGATTGTGTTTGGATGTTGAAC TGTTCTACAATGCTGGTAACAGTCAAGTACGCCTCATGAAGTGTCATGGA GAAAAAGCTGGCCAACAATGGAAATATCATAAAGTAGGAAAATGTCTAGT TTCCTAGTTATTTCCGGGGTGGGGGGGGCAGTACTAAAGTTTGAGACATC ATGATGTTTTGTTACATAGTAGTCTTATTTTGGAGTTAAATCaacatttt taggaaaattggtCCCGAAAAGACAAAAATAGGGTGGTTAATCCCCATAT ATGTCTTAGAAAATGTTCATAAGTAAATCAGATTTCTTGAATGATTTAGT CATCACTCCATTTTCCTTGTTACTTTGTCGAAACCTTCAATATTTAATCT TGAAGAGATGAATTAATGGTGCTTTTTTGCACACGTCTATGAAATAATCA CTCCCACCACTATGATGGTTGCCATGGGAAgaatttcatgcatttttcca aggttttcagataatttatttattcatattggaagtttatcgtggctaaC GTTTGGCTATGTTTCGttagattcttctcccatcatcgggcaatgtggag gatgtttCTCCCACTATTTGTACTAAGACCTTCTGACTACCAATCATTGT AATTTCCTTACAAGGTGTAAATTCCCATGATATAACATATGTGTAAGGTA AATTATCTCTTGAATTTATGAGATTACTCATTATTCCATTTCGCCTCTCT GTCTGGATGTTAGGAACTCAAATATTGGGTAGAATGTATGAAACTTATTT AAATTTACTTATTCATGACATGAAAAGCCGTTCGaagttttaccgaaatt ttaatgaaatttttcctGCAAGTATTTGTTGCCAAAAATGATTTTCTAAT TTGCAATAAAATAAATAGTTTTGTCTTGTCTTTTGGATTTTTCCCATCGC AAAAGCTCAaaaatttactgaaaaaaaaggatttcaaaaataatttaccg TTAAGGCAGGGCTGCACTTCTTCAAGGTTTTCAGTGCACTAATAAACTTC TTTAATATCTAAAAGCCGTCGTTACCTTTATAGGAAGATGAACGCTTATA CAATCCAGCTTATGGTATGTGTTTAAGTCAAGATGTCGAACAATATTTTT TCGTAACCATGGCGATTTGTGACGTCAGTGATGAAAAACAacattggaaa ttgaaaaaagacGAAACAAAGCGAGTAAAATAatttgggcttttccagaa aaaacttgAATATAGGGTATctaggatataacattttttggatatttacc cccggacagcaggtctaacccccggacagcaggtctaacccccggacagc aggtctaacccccggacagcatcagttgacccccctggacattcaaaatt actctcaaacagagcaaattaccccaaacagagcaaattACCcacaaaca gagcaagtttgcccccaggacaaggcaaattttgttagaattttcactac ccccggacactatatcctccaccccacatgtacaaacattttttggaaga gCCCTCTGCCTAGTTTGCTCATATTTATATCTTTTACAGAAACTGAATTG TAATACTCCCAACCTATTTCAAATCTGAATAATTTCTCGCATATATCTTA CCTTCTGAAATTTCTTAGATTTATATCTCAATTTTTGCAGACCTTTTTCG TTTTAGAGACTGCAACCTCTATAGTCAAATAGTAATAGAATCTCGTGATT ATCTTTCCAATGTTATATCCTTATAACTTAGAGTGTTGAGAAAAATCTTT CACCCTTActttgaattttatattttgtaattatttataaattttttatt ttatttttaggtaTTAAATTTTCAGGAAAACCATGAGCTTAAATCTAGGT GTTGGctatattttatttatgttgATTATATTGTAACAGTCAAAGTTATC CCAAAGCTCTCCCAATAGTTTATTTATTGACAGAGTAGAAGTAAAAAGGC TTAGCAGCCTAAGAGCAAAACATTCGTTACTGAATTTTTATCGATTTCTT AGGGATATTTAACTCAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053269TCONS_00053269Clytia hemisphaericatranscript
TCONS_00053270TCONS_00053270Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053269-proteinTCONS_00053269-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_228supercontigscaffold_228:18313..26029 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.42 18.13 7.06 7.16 52.27 40.42 49.8 50.66 24.67 23.56 19.79 17.44 12.32 10.27 11.86 12.46 20.08 19.68 8.66 12.51 13.12 13.21 23.95 21.96 24.3 20.72 17.54 13.49 18.72 20.84