XLOC_033654 (gene) - C. hemisphaerica

Overview
NameXLOC_033654
Unique NameXLOC_033654
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_228:345169..348218-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033654 ID=XLOC_033654|Name=XLOC_033654|organism=Clytia hemisphaerica|type=gene|length=3050bp|location=Sequence derived from alignment at scaffold_228:345169..348218- (Clytia hemisphaerica)
CCTGAAAACAGACATGGAATCGCACCGTTAACCATCATAAATCATGGTGA
GTTTTTGGTGCCAACTGTTCAAGTCCAACCTCGTGCCCATGGAGTAGAAT
GTCCCAGGTGCAGAATTACTTAAGATATGGTTTGTTTGGTACTAAAGATT
TGAATAGACGATATCGGCTTTGCGAATTCTCCCCGAATGATTAACCATGA
TTCATTGCGCAAAAAATTCACGGAAAGTCAATATCGTCCGTGAATTTTTT
TGCGCAATGCACCATGGGTAATCATTCGGGAAGAATTTGCAAAGCCGATA
TCGTCTATTAGAATTGGATCTTGTCAAAATATTATAAGCATAGGGGAGAC
GTCTATTAAAGAGAGTTTTTAAGCAGGCTGTAATAGAAATCTCTTAGGAG
TTCCTCAAGGGAATTCTATTGTAATACTCCCGAAACAATCCCACAATGCA
TCGTTATTTAGAAAAATCAAAAACCCCGATAAGGTCTATTGTATCTTCAC
AGTAATCATTGCAGAATGATGAACGCTGTGTAATGAGGGTTTTTTTTAAG
TGTTAAGTACAATGAAGTATAAGCCCGAGAGATGAGCTGGAGTTTTTACA
AGATACTTCACTAATTGGTCATTTGAAGTGATAGAGATGACGCGTTCTTT
AGAAAAAGTAATAAGATTCTTTTATTACATCTTAACGACCAACCAAATCA
AATAAGAGCTTGTAAAAACTCCAGCTTGTCCCAAGCCCGAAGGGCTAGAA
GCAAATCTCCAACCTTTCTCAGGCAAGAAAAAGTGAAGCCTTAAAATATG
CGCCGTACTTTTGACGACTGATTGAATCTAGCAATTCCTTTGTTTTCGAG
TGCTATATTTTTTGAAATTTAGCCGTAAATTTTAGTTTCAATCTATCATT
TGTGTAAAAACCAGGCGGGCCACTCAAGGCCGCGCAATTTTGGTAGGATT
TTGTTGGCTTCAAATCCTACCAAGGAGATTCGATTCTAGCCCTTCGGTCT
TATACTTCATTGGTTAATTACAGTGAAGTCTCTTTAACTCGAACCTCTGA
AACTTGAATTTCTCCTTAACTCGAATAAATCTGTGTTTCTCGTGCGTGAG
TTCTAGAGGCTTATAGAGACACGGTACTAATTTAAAGCATCATATTTCAG
ATGAAGAAATAAAACGTAGCACCGTCAAAGCCGTCATCCCAAGAATGTCA
ATTGAATGGTCCATTAGATTAACTCTTCAAATTACCGGCATTAATCAACC
TAAAGATTGGTGCAATGTTATTCATTTGACAGAAGACTCGGATTCCGACC
GTTTGCCTAGTTTATTTTTCAATGAATGGATCAATCAACTTCGAATCTAT
TTTCCAGGTATTTTCACTTTATATTTTCTGTAATCATCAATCTAATAGCA
TCTACTATACACTTTCCAATCAATCCGCATTTTCTTATCCGAGACCTAAG
ATCTTTCTCTTTTGTTCCTAGAAATAAATCTCTTTATCATATTTCCAATC
TACAATTCTATACAATTTTGAAGTAATACTTCTTTGAAGAAAAAAAACTT
TTTTTGAAATCCTAAATTCCATAATAGCATTAAAGCTTGTTACTTAAGGA
CCTTAAGGGTTAGAAAATGGATTTTGTACCAAGGTATTTTCATATTCTTT
CTAAAAGTCTGTTCACGATAAGTGTGCACTCTTTTTTCTTTTACCTATAA
CTTTTGAAGGAATTCTTCAATCTTTATAAATTTAGTATCGTTGGAGAGAT
ATTTGGGAGTGGAACAATTTGAAATTAAAAAATCTTTAAAAAAATTCTAA
AAATGAAGATGAAAATGAAGAAGAAAAAAATGAAGATCTTGTAGAAACGT
GCTATAACTTTCATTTTCACTGGAGAGATTTATTGATCTTTGGAGGTCAT
CACTGTGAGGAAATTTCACTAAAATATTTATTCAATATAAAGTTATGATA
CAAAGTTAATAAGTGATTGACCCCAAAAAACAGCAGAAAACAGCGTTTTT
AGACGTCAACTAGCTTGTAACTTTGTTTGATATCTTTTGACTGAATGATT
ATTTTTGAGAAATTTTTTCACAGTGATGACGTTCGATGATCAAGGTTTCC
TTTCAGTGAAAATGATAGTTATAGCACTTTTCTACAAGATCTTCATTTTT
TTCTTCTTCATTTTCATCTTCATTTTCAGAATTTTTTTGAAGATTTTTTT
ATTTCAAATTGTTCCACTCACTAATATCTTTCCAATGACACCAAATTTAT
AAAGATCAAAGAATTCCTTCGAAAGTTATAGGTAAAAGAAAAAAGAGTGC
ACACTTATCGTGAATAGACTTTAAAAGCATTTTCTTTATGCCCTTTTAAA
TCAACTTGTCATGAGTTACAGCCTTAAGTCTGGGCGCAGGTATATTGGCA
AATTTATAGCGTGTATACACGTCACTCGGGTTCGAAGGGTTAAGCATTCA
ACAAATCAATAATATGTTTACAGGCAGAGATCAATCATGGCCATACGAAA
CCACACTTTCCCTTCACACAAACTACACCATAGAGATTCACCAAAGATAT
AAAAGCGGTGGTAAATATCAATTCATTGCCACAGTTAATGGTGATGAGAT
TGTCAACGTTGAAAGTCCACAAGCAGCATCTGTACAACGTTATGATGTGA
AAATCTATGCTAGCAATCCTTGGTTTGCTTCCTGCATTGGTATAATCAAA
GATTTCAGATTCACAAATTTTCTATAAAGAACTTTTTCAGTACTTCCCAG
CTAAATCTCCTTCATTTATGAACGATTCTTTCGCAGTCGGTAAGTTTGAT
CGAGGAGGCCCCAAACGGTTTTCGTGATTGTGGGATTGGCGTTTTTCAAG
CTTGCAATTTCGTGATTTTTAAAACTTTAAAGTGCATGATTGCGTGATCG
GAGGAACTCCCCTGGAGGAACCAACGTGATCGTGATAGAAAGGAAATTTA
ACTCGTGATAACGTGATTTGGAATTTTTTTGCGTGATTTGAAAGGTGACT
GGGGGAATGGGGGCCTCATTGAGGACCTTAATTAAGAAAAAAATGAAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053330TCONS_00053330Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053330-proteinTCONS_00053330-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_228supercontigscaffold_228:345169..348218 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0	0.16	0.38	0.46	0.24	0.51	0.83	0.63	0.54	0.69	0.3	0.65	1.07	0.45	0.59	0.43	0.4	0.43	0.83	1.16	1.13	0.33	0.36	0.49	0.82	0.24	0.17	0.38	0.45