XLOC_033702 (gene) - C. hemisphaerica

Overview


Name	XLOC_033702
Unique Name	XLOC_033702
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_229:12700..22781-

gene from alignment at scaffold_229:12700..22781-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_033702 ID=XLOC_033702|Name=XLOC_033702|organism=Clytia hemisphaerica|type=gene|length=10082bp|location=Sequence derived from alignment at scaffold_229:12700..22781- (Clytia hemisphaerica)
ACTTTCAGGACAAAGAAGTCAAGATGAATGAGCAGCAAGCATTATTAGAA
TCCAAAATGTTGGAAGTGTTGACAAAGCAACAGTCAACAAAGGTAATGAG
AATCAGTTATTTTCCATCATCAATAACTTCGGTACATTTATTTTTTCTAT
ACTACCTTTATCGGCCCTTTTTACACCGGCCCTTATTGGCGTTATTTTTG
GGCTCGTGGCGTAATACGGGCCGGCGTAAAAAGGGCCAAGATTTTGCAAT
TTTAACCTAAAAACGGCGTTAATTTTTAATCATTATTCTTGAATTTAACC
CTTTAAGTGCCAATGACGAGTATATTGGTCATGGGTTATGTAGGAGGGCG
AAGCCCTCCTGTAATGCCCAGTTTGAGTTAGAAATAGTCACTTTTGGTTT
AACTTTTAGGAATTGGATTGGGCTTCATGGTCAAGCAAAAAAAAATCAAA
AGTGAGTTTTTTCAGCGAAATTTTAGGCTAAAAAGTCATAAAAATGCAAA
AATTTGACAAAAATCCACTTTTTAAAGATTTTGACCGTTTTTTGACCATT
TTTGGTCAATGAGGAGACTCTATCCAAGCTATCCAACTAAGCTATGAACA
AGTTTTTAACTCGTTCTAGATCCGGAAATATAAGCCTTTTTCCGACCTAG
GTCCATTCGGACCTAGGTCGAAGGATGATGATTGATGAAGCCTTTAAAGT
TTGAACTGGCGATTTTCTTTCAAAAGCTTAGAAAAAAATGACCGTGGCAC
CTAAAGAGTTAAAGGATTTTAGGTATGATTCGAAGACGAAAATTATCCAT
TGTTTTACTCCATATTTAATTAAAACTTCAGTGAAATATTTAAAAATCAG
TGATTTTCGCTGGGATTTTCTGCTGAAAAATGACATTTTAATGTAAATTT
TAGTCATTATTTACTAATTTGAAGCATAAGTAGCCATTTTTACAAATTTT
GGCGTTATTAACGGCCCTAATTGGCGTAAGCCCAAAATTAGGCCGTGGCG
TAATAAGGGCCGGCGAAAAAGGGACCGGCGTTAAATTAGGGTCGGCGTAA
AAAGGGCCGATAAGGTTATTTTTTCTGGTATTATTAATTCATTGTTAAAT
ATACTTGCTCAACCGGGTTAATCCTTTTCTTGTGTCCTTTTAATATTTTT
AATGACTTTTATTATGTTTGGGTAACGAATGTTTACATGTTCATGTCCGA
CGCTAGTAAATTGTCATATTTTCTAAAGAGATAGATCTATTGGGGGTGTG
TCAATCGACAACACTATATCTAAATCGCAATTATTCTCGACTTCAGTTGA
GCTACAATCTGACAATGTCTGTGTGTCTGTCTGTCTGTCACAAAAACTTT
AGGGCAGCCTGGAGACTTCAAAAATGGTTGGATTTGGCTGAAATGGGACG
AGTTTTCCGCCAAAACGAGGCTAAAACTTTGGGGCAGCCTGGAGACTTCA
AAACTGGTTGGATTTGGCTGAAATTTGGCACACTTGTTCCTTGGGTGAAT
ATCTGGGGGTCTACAATTGGGCCTATGAATAATGTGAATCCACTGAAATT
GAGCCCAGTGCGTTGCGCACGTTCGACTATTGCCTTAACGGGAAATATAT
CCCAAACGAGAAGGGGAATCAGTCAGGTTCTATATACAAAACTATATAAA
CTATACACGATTTCATATATATTGGCAGTAAAAACTGATGTGGACCTGCA
GGCTAAGAGTTTATCCTTTCCAGGCAAAAAGACCTGCGGGAGAGTAGAGT
AGAGTTTAGCCTATATTTACCTTATTTTTGGGTTTTCATAAGTACAATTT
CCAACCCCCCCCCGGCAATTAGGTCCCCCCGTTTATTAAAATCTTTAAAG
TTTTCCAACCCCCAACCCCCCGCAGCTTATTTGGAACCTAAGAGTAGTGT
TACCGAAATAATGGTATCGATCAAAATAATGGGCTCTTCCAGAAAAAGTC
ATGGGGGGTGGAGGATATAATGTCCAGGGGGTTCATGACTCGCTTTGTCC
ATGGGGTAGAAAACAATTGTCCAAGGGATAGATATCATTTGTCCAGGGGG
TAAATACCATTTGTCCAAGGGTATATTTTTTGCTGTCCATGGGTTGAATT
AGACTAATTTGTCCTAGGGGTGTTGGGTGATATGTNNNNNNNNNNNNNNN
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NATATGTGTTGTCCATGGGGGAGACCTGACTGTTGGAGAGAATGTCCATG
GGTCGGTCGTGTCATTTGTCCAGGGGTTGGAGAAGGGTCCTTGTTTGTCC
ATGAGGGAGAAATCAGGATGTTTTGTCCATGGGTATTGATAATATTGATA
ACGTATTATTATTATTATTACCTTATTACCTTAACCCTTTGAGTGCCAGG
GTCCTTTTTTCTAAGTTTTTTTTAAAAAATCGCTAGTTCAAACTTTAAGG
GCTTATATCTCCTGATCTAGAAGGAACNNNNNNNNNNNNNNNNNNNNNNN
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AAATTATTGACGTAAAAATGATTTTTTCTAGACTTAAGTTTTCACTGCGA
TTTGAAAGCAGACACTTGCATTTCATTTTGTTCTTTTTGTATTGACTTGG
AAATAATTATGATCAAGCGTAAATTGAAATTAATCAAGTATATATATTTA
AAGTGCAGCTCCTATGTAAATTTCAGAAAGGCTGAAGTATTCTTCATCAA
ATTATTGACAAAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGGGTAACAACGGGTTTTCGACGCCTAGCGTCGAT
GATCAACGACTAAACTACGCAGATGTCCCCGAGCGACGGATAATGGGTTA
GCAGTGAGCAAATCCTTTAGCTCGACATAGAAATGCAAATTAAGCCATAT
GTATTTGCTGGTAGAAGCAGCTGTAGTTTCCATACATTGGTGATTTGAAG
AATGTTTGATTCTGTTGTCCAATCATGTATGCATATCGTCTCTGCAAGCT
CAGTGTTTCATTTGGTATTTCAGATTTCCGTTGGTTGTAAAAGTTTTCCC
ACAAACATTGCATTTTAATGGCTTTTCACCATTGTGAACACGTAAATGCA
CATAGAGATTGCTAGTGTTGACAAATCTTTTTTCACAATACTGGTTTGGT
TTTTGTGCTTTAGAATTTGATCGTGTTTCACCAAAGAATTAATTAACTTG
ACAAAAGTAACGTCAAAGGTTTAGAACGTGTCACTTTGACCTCCGAAATA
CTTATTGTGACGTTTCGAACGTTTTTTGTAGAGCATTGCAATGAAATCAG
TTCAACGTAAAAGGGCTTGCGCTTTTAGATTTGCGTAAAATTTCGTGTCC
CGAAAGGGTTTTTTGCTTGCGACGTCAGTCTTTTGCCTATAAAAATATTT
CCCAGACCTAATCGCTTACCGCCTCTCGAAAGATCCCTTTTTTCGAATGA
GCCAAAAGAATTCCCCTCCGGAAATTGTTGTCACAGGTCGACTAAGGAAT
ACTACTATTACTGAAACTTTATTGACTAGCTATATTTATAAGATGATTAT
TTATTAAATCAAAAGAAGTTTTATTTTTGATTTTTAAAATTGATGTAAGT
TTTTGAATCAAATTTTAATTGTATTTTAGATGTAGATTTTGAATAAATGA
AATTAAATAAGTTAAAATTAAAATTAGTTAATTTTGGAATCAGTATGTGT
TCTCATAACATGTTATTTCAAAAAAGTACAGTGCACCCCGTATAATGCGT
ATTTTCGGGCTAAAATATTGGCGACCTTCCCAGAAATTTTTATTTTGGAT
AATTTTTTAGGCCGATCTTCTCATGATGAAATGTATCTATTCATTTTCCG
TTTTATTAGTTTTCAGTGTTAAATCAAATTATAAACTGTCTGTCAAATCA
TCATTTATCATCTGTGTTATCGTCTTTGGTATTCGTACATCTCAGTCAAC
CCATCATTGTTCCATGAAAGGTGAGAAATTTCTTTTGTATTTTAAAAGTT
TACTAGATTTATTTCAAACACGCTACGCTTATGTACGACTTAGGGTGTTT
AGCCTTTTTTGTATATAGCGTAAGGACAGGGCACCTAATGGTAGGGGGTT
TTCAAACGGAATGCATGGCCTAAATATCTACTACGTTTGTCGTATCTTTT
TGCTAGACTTTTCTTCAGCCAATCACATCATTCAAAAACTTGTTAAATAT
CCATCCAAAATCTAGATAGAAACTTGAAAGAGAACCAGATACCGCCTTGG
ACTGATAATTTTACCGACCACAGTATTTAAAGCGCATGCTTTTTGTACCC
GGAAATCAGAGCTGTAGACAAGCGAAGATAACCTGGAAAAAAGATAAGAG
AATAGTACTAGGAGACTAACTAAGGGAACGTTATTTAATTTTAGCCGTCG
AAAGGAATTTCAAAGAATCGCAATTCGTGGGAACTAATTTTTATGGTTTT
CCCCTTTTTCTTTCTTTTTTGCAAGGAATTTTTCAATTTTTGTTTCTTTG
ATAAAAATGGCAGGAATTGTATTATGCGGGTACAAATCTTCGCCGTTTTA
CCGAAAAAACGCGACAAACGTAGTCTAGTATGCTAAACAACTTAATTCAG
AATAACGTAGGATGAAGAAAAATCAAGCATAGCTTATTTTAACTATCTCT
GAAATTGAAGTAACTATTTTCTGTTATAGTCTGCACCAAAGTGCTTGGTT
AGGACCGTTGGTCTGGTCAAGTTGTGAAGATGAAACGTTCTGTAAGTGTA
ATTGAATCTTCATTTGTATATTGGTCAGATATTAGAGATTAAGGTTAATC
TTTAATTTTGCATAGTTCTTGAGAACGAAATGTTGTACGGCTCATATTTG
ATTCCAGGATTTCGGAAAGTATTTTAAATTCTAAAGTCGATTCGGGTCAA
TAACATTATATTTAAGAACACTGACATTTTGTACGACCCATTTGAAATAG
TTACTCTCGGGTATCTAATAAACGGGATTTGGAATAAGCGGGGTGGGTGG
AAAAAATCTCAAAACTTAATAAGCGACGGGGTTGAATCGAAATGTCGTGG
CTGGAAAATTTTTGAAAAAGAGTCTAATACAGAATAATTAGGGCAAAAAA
GGGAACTTTCAAAATCATTTTCTCAAAAATTAATAGGCGGGGGGACGCTT
ATCAGGTACTCTTTTGTGCTTAATTGTATGGTGGGGCCACTTTGCAATTT
TTGGAAAAAAATCACCCCCATTTTATGAATTTTTCCCAAAAAATCTGAAA
AGTGCCAAAACCTTCATTTTCCTAGGGGTTTTGGGGAAAATCACCCCCAA
TATCACTTTAAAATGACCCCCATTTTATGGATTTTTCCCGAAGTACCAAC
CCCTCTGCTTATTCCAGCCCCATCCCCCCTACAATTAAGCACAAAAGAGT
ACCGAGAGTATTTCGAAGCTTGGGGTCACGCACAAAAATGAGGTTCGTTT
ATACATTCTCCAATTTTGAAACACAACGGGATTCGTGAAGTACTTTTGAT
TTTCTTTTTTTAGACGCGAAGTCGTAATGCTGGAAAAAAGTTGGCAAATA
CTTCCCCTGACCTTTCAGTATGTTTTAATCATTTAAGTTTTAATCAAAAT
GTATACTTGTCAAAAAGGATTTGATTTTTAATGGATTATCAACCGAAAAG
CATGTCTCTCTTCGGAAACATTGCAATACAGTGTGTCCAGAAAAAAGTGG
AAATTAAAAGTAGGTAGTAGTAATTAACAAGTGTATTTTATTGTTCTACA
CTGTAACAATTAACATCTAATGATGTCAATTTTATAACTGGTCACTACGT
GGCATCAAATATCCAAAAAGACTGAGTAAACGTTTCTTTTCCGACACAAT
TATCCAAACGAAAATGGACTTACAATACATCGATGACTGTTGACTGCTTA
ATCTAACACCAGATTTTTGCTCTTAGGTCAACGGCGATGCATACAAATAT
TGTCTTAGCAAAACTGATCCAGATTATTTAGTCAAACGGTACATAGATGA
ATTCATTGGTAAGTCAAGAATCTTCGGAACTGTGTACCAAGTTTCTAATG
CTTTCTTAGTTCTTTTTGTGGTGTTATTATGAATAAAAGTGGGAGATGCA
CAGCAAAATGTAGGCTACTTTATATCTCCTACCCTCCGAGCGTAGCCGAT
TACGTCAGACCTGTATTCTGTGGGGCACCTATATCCTGTGGGACAGGGCC
TGTATTTGAAAAATAATTATATGTATTTGCATAAAACAATTTCATTTCTG
CGCAGAACACACGGATTATCTTTTTTGGTATTTGCTCCCTTTTCCCGGAT
CATGGTGTTATAAAAAATGACATTTAAAAATATAAACCTTACCTTAGGTT
ATGGGGTGTTTGTGACCAAAACTATGTCGCCATCATCCTTCATCTGCGAG
TATCCTGGAGATATCATCACAGAGGAAGAGAGAAACCGAAGAGAGGAAAT
TTATACAGAGCAGCGGTTAGGAAGTTATGTTTTTGATATTGAACATGACA
AGAAAATGTACTAGTAAGTATTAGGAAGTTGTTTGCATAAATTGAATTAT
ATGGTGGCTGCTTTCGTAATTTTATCACTATTGAATTTAGGATTTTTAAT
TCGGGCTTCCACGATTGTGCACAAAAAAAGATCACGTCTTGCCCTTTCTA
TTTGAGAAATAGCTTGAATTCTCTTGAAGATCATATAATTAGGCTTCATT
ATGTTACAATAAGTACTTTTTCTCTTATCAGTATTGACGCAACACACACT
TTTGAGAAAATTGGAAGATATATCAACGATAGCAAACTGTATTTTAACGC
TAAAATGGTGGTTGTATTTTGGGACGAGAGACCTCATCTGTGTCTCTTTG
CAAGCAATCAAGGCATTGCTGAGGGGACGGAAGTGAGATACTCCTACGGC
CCAATCAAGGGAGCATCTTGGCGGAAAAAGGT

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00053389	TCONS_00053389	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00053389-protein	TCONS_00053389-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_229	supercontig	scaffold_229:12700..22781 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13	0.06	0.14	0.07	4.96	5	3.43	4.51	3.16	3.97	5.79	4.35	8.99	9.51	0.14	0.08	0.19	0.39	0	0	0	0	0.15	0.26	0.55	3.16	0.09	0.09	0.14	0.43

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XLOC_033702 (gene) - C. hemisphaerica