XLOC_033827 (gene) - C. hemisphaerica

Overview
NameXLOC_033827
Unique NameXLOC_033827
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_233:1418320..1421947+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_033827 ID=XLOC_033827|Name=XLOC_033827|organism=Clytia hemisphaerica|type=gene|length=3628bp|location=Sequence derived from alignment at scaffold_233:1418320..1421947+ (Clytia hemisphaerica)
GTtttaataaacaaaaacaaataaagtGGGTGGGATTTTGACAGCCAAAT
TTTCCCATTATAATCTTATCTTAATTCATATGTAGACCACAAAGTCGATG
GTTAGGAGTGGATTGATCACAGTGTCGGTTATATTTGGTGACACCTCTTT
GGTATTTTAAGATTTATTAACAGCGAAAATGATGGCTGACTATATGAATA
TTGCAATTCCAATTATGTTGGTTTGGTTTGCTATAAGTTGCAATGCTGGT
GAGTTTAACATCACAGTAGGTAGTAGTTTAACAGTCACAATTCACCGGGA
AAGGCGGCGGCTgatcttattttcttgtttaaATTTGCCTAGATTCTAAT
AAGCATAAGTTGCCTGGAATTGAAGTTAGTACTTTGAAATACCATCATTA
AGGTAAATTTGGACTAACTTCAGGCTATTCAGAACAAAAGAAGAGACTTT
TCCTTTGAACTCAGAATATtaaaaggcttaaaatgttAGGGGGACAAGGG
GTGTCAAATATGAATGACAGGGGAtgaaaaatacaacaaaatacttgaga
atattctttaaaaaacttccTTAAACCCGTCAGATTCTAGCTTAAATCGA
AATTAAGTAAATACCAAAACCTTACTGTAAAGGGTCAAGTTATAATAGCA
TTTGGGTTACTTCGATCAAACTTTGGGCCAACACCCTTCTCTTTTCCCTC
GTTGATGCAAGGGTTTCTAGGTATTTTTGAattacaatttaaaataaaat
cataaaatacctcatctttttttttgtagaaGTGTCAGAGGTGACGGTTT
ACAGACAACGTGTGCAAGATCTTGGTCTTCGGACGGCAAGAAGTAGTGCA
TTGTTCACAGGTGGGTACAATGTTGTCTATGTTCTTGAACTGCTTTGTTC
TAAAACTGTGAAAATACATAAGTATAATTAAAGTTGGAGCACAATATTCA
TAGGTTTTGTAATTGAACTTTTCACactatacagtgtgtcccaaaaaagt
gGACACATTTTTATGTAAAGTAAAATCTTCATTTATGCCAAATTTCTGAC
TTATATACTTGGTATTTCAATCTCGAAAACTTATTCAATCATATTGGTga
ttgaatatctattgattggACAGAGAATTCTAATCTTAcagtattttaat
tattttaagcCAAGTTTACATAATAAAGTTTGAGGATTGTAATTTACATA
gaaatttgtccgcttttttgggacacactgtagaCTTGAAGACTTCTGAC
TTAAGTATTCATGAGAGCGAAAATTGAATTTACAAACGTCTCAGTTGAAG
GCGAAATAAGTAATGCAAGTATCTTTTTACTTACAATATCTGTTCAACCT
CAAAGAAATGACTCAGCTCTTATTTAATCCTGCTCGTTATTAGGGACTCT
TAATTACTTCAATACTGTGGGAAACTGAAATTTATTCAGCTTCAAATACA
AATTTTTCGACTTTGGCTTAATCAAAGTAGGTCATCTTTGCGTTCACTGA
AAAGCTATTTTCACGATCTACATTTTGTAAATTACGCGCTCAATCAAATT
CAACGGTAGCCGAAAGAAAAGTTCATAAATGAAGGGCGTTCAGCTGAAAA
GTATTGAATTACTTAAATATTGAATTACAGTAGTCTCGCGGTTATTCGAA
ACTGCACTTATTCGAAAAGTTCGGTTGTTCCTCCTTGGATCTGCTTACCT
AACTCTCGGTTATTCGAACttcatttattagaattttcAATTGTTCGAAG
CAAATTCTATTCCCCTTGGGGCCAATTGCAGGCTGAATCACCCTcagtta
tagtctaagacaaatcactaactaagaaataagcccaaagccgaagaaaa
ttctcAAACGggctttttgctgaaaagggtttacagccggtagagtttac
cagtcttcgaaactctcccgccgattttttttccgtataccgccataacg
ccataccgccattttcccgcctttactatcaatGAAACGGACGACAACAT
CGTCTAGCAATTCCTTCAAAAATCCCATTCTCCTTCGGTCTACTCTCATT
ACAAAGTTGAATGTAAactgtcaaaaaatatttttgtttctaatCAGATT
TGTCGAAGAAAATTCTAAATCTAGTTTAGCCCTTAAACGGGTGTcctcta
aaaataaaaacaacccGATGTTTTCACAATAAGTGAAACCCAACTCATAA
GAACTAGTACTGCGCTTGAAAAAATATAGACATTTAAAGATCTTTAGGAA
CGTAATCTCAACACATTAGATACTGTTTTAATTTAACTTCTCTTATtgga
atctttctctaattcgattgtTCCACGGTTCAGAAATATATTCAATAAAA
GATCGAAATATTCAAGAAATGATGGCAAAGATAGACCAGAAAAATTTAGT
TTATTAAAAACCTgaattttaacctttttatgccTGTTTTTAGATTAATT
ACTTTAGGCTGCTAaggcgaaaataagaaaaatgtagtgtttccagaATG
CAGGTGAAggaaaaacagcctttttaataattttttggttgctatttttt
ataacttaagatcattgaaatagaactttaaagataacttttatgtacaa
acagtatggagtaagccctgaatatcaatgtatcaactactaacgaacaa
aacttgatttacaagcgggaatatctaaccaaacgatgtttgatagcttg
aacggtcaacttgagtttctttatgatgaaccatatagatgaacccattg
TCTACGTccgggtcagaaaatttttttttttccggaaaaactacattttt
ttattttcacctaaccagaaatctttattttattttcagcttGTACAATC
GGCGGCAAACGCTATCACAGTGGTGAAATCTTCATTGCTAGAAACTGTGA
AAGAATGTGCCAGTGTAGACGTACCCGTAAATTTCAAATCATCACATGTA
TGCCATTATGTCCACGAATGAGACCAACAACATGTAGACAGGGTCTTGTG
AGAGCTATTGCACGATATGTTTACACTTTTCGCCCACTTTGTTACTGTCC
AACAACCATGTGCGTTCGAGATAGAACCTTCGTTCCCTAAAAATAATCAG
ACAAAGAAATCAATTGGCAAGTGATGAGCATTTCAGTTGAGATTGGAGTC
GTGGATGGGCAGATCGAAATTAGTAAATTAGCCTTAAACCNAGCAAGTGA
TGAGCATTTGAGTTGAGATTGGACTCATGGATGGGCAGATCGAAAATAGT
AAATTAGTCTTAAACCACATCCTTGATCCTTGGGAAAAGTGAAATGGCGG
TCCCAAAAAGGACTCATGGTTATAAGCCTCTTCTGGATGACGTAATTGCA
AAAGTTGAAAGCTGGAATAAAACTCATTGAAATTAAGATAAGGAGTTATT
TAGACCTGCTGATGAACTCAAAGCTCACAAGAACATTTGATAGACTCAGT
GAAGTGAAACCTTATAgaatatattttcataaatgttgtatgaattttca
aagatttgtaTTTATATCTAATTTTAATAACATAAAATTCACAACTAATA
TTTGATTCAATTATACCCTGAATTTCTTAGCTTTTCTTCTACATGCTATA
AAAAGGGAAAATAAATATCAAGTTTCAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00053611TCONS_00053611Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00053611-proteinTCONS_00053611-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:1418320..1421947 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14	0.27	0.21	0.29	0.29	0.29	0.79	0.87	0.31	0.13	0.26	0.07	18.72	14.64	0.08	0.08	0.09	0.03	20.72	14.54	0.97	0.54	0.33	0.14	0.1	0.27	0.21	0.29	0	0.05