XLOC_034419 (gene) - C. hemisphaerica

Overview
NameXLOC_034419
Unique NameXLOC_034419
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_243:425795..438133-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034419 ID=XLOC_034419|Name=XLOC_034419|organism=Clytia hemisphaerica|type=gene|length=12339bp|location=Sequence derived from alignment at scaffold_243:425795..438133- (Clytia hemisphaerica)
TTTTCAGACTAATCACTACTAAATCAACTAACAATTAATAAAACTAAGGA GAAGCAGAAAATGAAATTTGCAAAAATTATATAACTTAACTTGCAAGATT GATCAATAAAATCAAGGTACGTAATTTTAATATCATGTGATTATCCATCA CGCCATCATAATTTTCAAGTTTATTTTAGGAGTAGAGACATAACTTAAGT CTGCTTCAAAATTTTGCGTTTTTTATTTACATAGTTACCGCACACTAGTT CTACATCTCACGATATTCATCACGTGATATTTTATACGGAAGCACCAGGT CCGGGTGTTTAGTACTTATTTTGAATTTAAAAAATAAAACTAGTGGCAAA CGCCCGGAGCTATTTTCGGGTGCTTCCGTATAGAACGTTCCGTATTGAAT GTCATGTATAGAGAAACTTGCAGAGTCTATCTTTGCAAATTTTTAACAAG CCTTGTAATACGAAGCTGATGAGGACGTAACGATGTTTAAAGCTGGGAAA AGGATCTTTTAGATATTCGTAAAAATGTGTACGGTCAAATATTTGTAGTA TTAGACTGGAGTCGTTTATAATGCGTGTAATACAGTAGTATAGGCGTTAT ATGATAATACGACTATTGTTACGGGATTTAGTTTGTACAAACTAAAATTT GTTCTCTCCATTACTTTTTGCTTTATTTCTACTATGTCTGAATTAGTCGT CTAGTTTGATAGACTATGCTAATATTAATTATACAAAGTATTTGTAAATT TGATTTCGTCAATTGAGAAATGCGATCCTAAACTTAAAAACCTAAACCTC TGATATAATAAGTTTATAGGAGGCTTATGAAAAAAAGGGTTGTGTCAAGT GCTGTGAACTTGTAATTCAAATGAAGTGATAAAAGTAAACTTAACGCGTG ACTTTTAAATGTTCAACGTATTTTGTTTGCTATATTTTTTATTGACTTTT TTTAGGTTTTAGTTGTTTGTTTTTCCAAAATCAATATATGGAGCTACAAA TATTCGCATTCTCTATAAAAATGATTATTCAATTTTGACATTCTCTGGTT GTTTCTAATTGATCAGTTTATACTCATGTCTTGCATGAACTTTGCACATT GATACATTGGAGGAACAATACCGTACACGTTTTGTAATTAGAACCCAGCT TATAAGAAAATTTAGAACTGAAATTAAAAATAAGAACAACGTAAGAACAT CGAGAACATGACAAGCCAAATTTGCTCAAAATTATCTGAAACTTAAGTAA TTCCAGTAATTATTTTACTTTCAAACTTGAATTTGAGCAAATTTATTCGG CTTGAGGGCCATTTTTTATATCTCAAAGGTATTTCTGTATATTCAAGTAA ATTAATTTCAAGAACGCCAATAAAAAGATTTTAGACTCAAAATTGCCTCT TCTTTCAGATAATTTAATGCAGAAGAACTCACCATGGGCGGTCAGACGAC GATCGTGGAACCCATCTTATTTGCTTACATGTTCAACAATTTCATTCTAT CACCCGTCGAACAACAACTAGTCTTCAGAAAAACATGCTTTCAAAACTTC AACAAATCATACTGTCAAATTCTATTCGAATCGAAAAACGAAACTTATAA GGACGATCAGAATTTTTTACAAGAGAAAACTTCACAATGGGACATTTACT CTAATTTGGTTCAAATGTTACCAGCTATTATATCCACGCTTGTTTACACC AGTTGGTCAAATAGAATCGGTCGCAAACGGGTTATGATTCTACCCATGAT TGGAGGGACAATACTAACAATAACACTTATCTTAAACTCATACTTCGAGG AATGGCCTTTAGAGTTGTTACTGATTGGTTCTTTCTTAGATGGTTGCTTT GGTCAATTTGTGGCAATCATAGCATCCATTTATTCATACGCTGCAGATGT GACGTCCATTGAAGGACGTACTAAACGAACAGTTATTCTTGAATCTATGA TGTTTCTTGGTGGTGTCGTTTCAAGTGCAATCAGTGGTATCTTATTACAG AAATATGGTTTCATACCAACTTTCCTACTGGTATTAGCAATGTTTGCATT TCAAATGATTTATTGGTGTTTTTTACAAGAATCATATCCACCAAGGCCTG ACCAACCGAAGATTTCATTTTGTCAGATCTTGAAAGGTGAAGCATTGACA GGTGCCATTCGTGTTGTGTTTAAAAAGAGGAATGGTAACAAACGAAGAAC CATCCTTCTGTTGTACGTTGTTCTATTGCTCTTCACTTCGGGTAAGATTC TTCATTGTTTCTACCATAGTGATTTGAAAATGAAACTGATAACAGTAATG AGACTCTCCAGTGGTTTTCTTGTGTGATAGAGTGATCCAAAAAGTTTTTA TTGCATGGTACAAAAATTTGTAGGTACAATGCGTGATTTTGGCTATTTTG GCTATTTTTAAGCGATAATAAATCTTAACGATTTTCGTAATGTACGGACA AAAAATATTGCGTGATAATGAGGGTGCCTCTGGGGCCTCAGTAAACGTCG TTCCGAAAGAATTTTCGTAAATTCTTTCCAACCAACTACCTATTCTAAAA TTTTCAAATTTTTTATTTTTCTTGCCTAGTGTACACTGGATACGGTGATG TGAGTGTTCTATACATCCTACATCCACCAATCAATTTCTCTTCTGCCAAT ATTGGTTACATGTATGCACAGTTCAATGGTCTCAAATTTATTGGTGCTTC ATTCATCAACTATGTCTTTTTGCACAAATTGGGTATTCCTGACATTCGAA TATTGACCATTTTTCCGTTGGCTTTTATTGGTTTTTGTTTAACTTTGGCG TTTACAACGACGGCTTGGCAAGTCTTTGCATGTAAGTGACAGATTTATGA AACTTCTTATTCCGTGTTCTTAAAACTTATCCTTAAGGCCGGGGCAAACC GATCCAACATTTCATCCAACATGCCTTTTTTCTGATGTTGGATGAAATGT TGGACCGGTTTGGGTCAATTCAAATTTTTGGAAAAAAATGAAAATTCAAA AAAAAAAAAAAAGTACCACCAAACCAATCCAACACGAAAAATTACACAAT TCAATAAGAGAGCTTCTTTGATCTCGCCGCAAATGTTGGATGAAATGTTT GATGGTGATCAAAACTTCATCCAACACCATCCAACACGATTTTTTTCTTC TTTTTTTGAATTTTCATTTTTTTCCAAAAATTTGAATTGACGTCAACCGG TCCAACATTTCATCCAACATCAGAAAAAGGCATGTTGGATGAAGTTGGAT CGGCTTGCCCTGGCCTTGCACCTTATCAGTAGAAAATTGGTCGGCAAAAG GTTTTGTCACCTTGTCAATAATGTCCACACCTTTTACCGACAATTTTTTT TTGCCAGAAAAACGTCAATTTTTAATTGGAATTAAAGATTTTATTTTTAC ATAAGTGTTCCCGTTTTATATCAGACACATGTTTCGTATCAGGACAGTGT CTGCCTATTGTTATAGTTATTTTGCTGATGTAAAATTTCCTCTTTCTGAC CAACTTGCTCCATATCCGTGTCAATTCAATATTAAAAAGCTTGTGAATTA AAATTGATGAGTTAGCAAGCATTATCACTCTTATTTAAAAACAAAACCTT TAAAGCCGAAAAGCACCAGAGAATTCAGCAACTATTACCTTAGGGGAACT TATATTTTGGCGGAAAAATCCTGAAAATTTTTTATTTTAGCGAGAACTTA TTTTGGCGATTGATGAATTTTTTTAATTTTGGCAGGAACTAATTTTGGCG AATGACAGTGTAACTCTGTTCTATTTTGCCATATTTGAAGCTTTTTTGTA AACTCAAGAAGTTATTTAGGCAAAACTAGACGGTTCCCGTCGTCGCAAAC GCCGGTTAACGGTTTTGCTTGCACATCAAAAGCCTTTAAAATATTATAAT GTGGGTTAATTACTGACATCGTTTTGGCTTAAAATGCCGAATACAATAAT AAAAATTATACTTCTAAACTTTCTACATTAGTCAAAATTTTGTGTCTGTA AGCCTCTATGATATGTCTTTTTAAGATAACGGAAGTTTGTGTTCAATGAA ATGCCATAGTGACCCTGTCAAAATTATCGAGGGTATCCGTCGTTGCAGAC GCCCAAAGGTGTCTGAGTTGGTGAGAGGGTTGTTTCTAGGAAAGAAAAAG GCTTAGTTGTGAAGGAGAGGCTCGCGCTTTGCGATTGAGCACTGAAGGTT TTCCCGTTTGTTGGCTTCACATGCGGACAGCTTAAGACCGACGCATATGC AATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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AGCCAGTAGTGTAGAAATAACGGACTGAAACTCGATTGAGATTGGCTTTC CCATGTATTTTATGGCTCTACATTGAATTCCATTTGTCAGAAAAATCTTT GGAATGTTGAAAAATATGACAATATTTTGTGGTGAGGATTCGTTTATTTA ATTATTTTAATCGGGGATAAAAATTGGAATATAATTTTCCACTGGGGACG ATTTTTTGGTCAATTCTTCCAGTGAGAGGGGGTCTTTGAGAGGGAGGGTT TTTACCAAAACCAGTATCCCACATCGGCACAGAAAGTTAATACGATTACT TATATCCTTAAGGGCTGACCATAGTCTAAAAATAGATTTTAGTATTTGAA CATAAAATTTATGTTTTAGGTTCTTTAACACTTTTATCAAAGAATTGCTT TTAGAAATTGCTTTTTAATCAAATCCCTTGAGAGTAATTAAGAATTTAAC TGCAAAAATGACGCTATGAACTTTAAAAAGACGTTAATAATGTGTTGCAC CTTCTTTTATAAAAAGTGCTAAGTTTTAATGGGTAATTAACCTTTTTGTT TCCAAGTTTTTTCAAACTGGCTGCGTTTAGACCAACTGGCATTTGTAATT TGGCATTTACTCATGAGGGATTCGATTTTGATAGCTTTTCCATTGTATTT TCTGTCATGGCATTTAAGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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GATAATTGGCCTAACAGAAAATGTATAACATGCCACCGTTTTGTGGGCTA CATCAAGTAGAGATTTATATTTTGTACGTGGCAATTATTGAAAATTCACT ATGGTCAGAGCCCTTAAAACATAATTTTTGATGATACAATGATATACAAA AGAAGACGCGCACGTCTCTGATGCGATGCTGGCAAAGCAAAATTAATTGC TCGCACGGCTTGGCATAGAAATGGTTTTGATAAAAATGCATGTATTTTAC AACTTTTACAACATGGGAAGCTTGTTTACTTTTCAGGTCATTTATTTGCA TTTATTGCATCAACGGAAATCGCCATAGCTTTTGTAGTAAGCATTGCGTT TAATGCAATTTACAAAGCAACAGTATCCATCTCAACGAAGATTATTTGAT ACATTTTATCAGCGCTGTCACTTGTCTCCTTCATTATTGTTATGTAAGTC TTCAATAGTTTGGTAGAATTAACTCAATCGAATTAAAACGTTTTAGACCC TTTTTGGGCCCCATTTTTTGATGATGTTATTTGTCAGTACACGAGTCTCA AAGATGTGCCAGATACGCTTATGTCTTTAGGGAAAGCCAATGAGAAAGAT TAACTAAAAATCTTGCCCCGTCTGACTGAAAACAGGGATGTGCTTAACCT ATACAAACCCCTGCAAACAAAGACTGTTTCAAAAATGAATTTCGACACTT GATATCTAAAGATCATGAAAAGTAGATAAGGAAAATGGGGTCGTTTTTTT TGTAATTTCGTCAATTAGACCCCTTAAATGGCTCGAAAATCCGTCACTTT CTTGGTGGCGTCGTTAGCTAATGCTCAGTAAGATGTGCATTTTCAAACCA GACTCAAAAGACAGGCCTTGAAATGAATTAACCGAAAACGGTATGGTTTT AAAAGTATTCGGTAGCTACATCACAAGATATCTAGGTTTTGAAATCAATG TTTTCTGCTGAGTTAGCACATTTTACATTATTTTAGCTGAGTCAGCAAAA TTTTAAAACATCAACACACTGAAAGGTTTTTTTGAAACTTCGTCACTTGC CTAAAAGTTTCAGCACTTTACCCGACTATTTTTTCCCCTTCAAAGCCAAT CTATACTCATATGAAGCTGCTTGCTGATATTGCAGAAGCAATCTTAGAGT CTTTTTACTGCCAGATTATTTAGGTTTTAGCGCTTCTTTGATGCTAGTTA ACATAAAGTTTTTTGACATTTTTTTAGTTTTGTTCAAGAAAATTTCGCAG ATAAGACTTTTCTAAATTTTCATGGAGACTTAATTCGCGGATGACACCCA AATCCGCGAAAATTTATCCCATTAAGGTAATTTTAAAATNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNCCCGACTATTTTTTCCCCTTCAAAGCCAATCTATACTCATA TGAAGCTGCTTGCTGATATTGCAGAAGCAATCTTAGAGTCTTTTTACTGC CAGATTATTTAGGTTTTAGCGCTTCTTTGATGCTAGTTAACATAAAGTTT TTTGACATTTTTTTAGTTTTGTTCAAGAAAATTTCGCAGATAAGACTTTT CTAAATTTTCATGGAGACTTAATTCGCGGATGACACCCAAATCCGCGAAA ATTTATCCCATCAAGGTAATTTTAAAATGTACTTTAATGGGATAAACTTT CGCAGGGATTAAATTTCGCGGATTTGGGTGTCATCCACGAAATTAAGTCC CAATGGAAATCTGGAAGGCCCTCATCTGCGAAATATTTCTAAACAAAACT CAAAATATGTCAAATAAATACTATTTGAATGGTTAATTGCATCAAAGAGG CGCAAATAATGTGTATTTCAACAACCNATAACTAAATAATATAAATACTA TTTGAATGGTTAAATGCATCAAAGAGGCGCAAATAATGTGTATTTCAACA ACCAATATGCATGATTTGAAAGATAAAGTCACAAATTCGTGAAAATATTG CCCCTAATAGTGCCACCCGCGAAATTAAGTCCCCGCGAATTTTTTTAATT TCGCGGATAGGCCCAACCGCGAAATTTAATCCCTGCGAAAGTTTATCCCA TTTAAGTATCTGATTGGTTTCTTTTTAAACAGTGGATTGATCATCAACGG AGACGACGAAGAAGATTACGAAGAATTGAATGAAGAAAATGAAAATGAAG ATGATGAGAATTCAAAACATGACTCGCTCAACAAAACTGTATGAAAATAT CCGCTGACGAGATACTGCACGTCTTTTGAAACATATATCATTTTAATACT ATTGTTTGTCCCCGAAAAATAATTATAAAAAATTTTATACCTAATTTTTA TGATCAAGCTATTTCTTTTCTAAAAAAGTGTTTAATTACTTTGCCTTGTA GCTTGTAACTAAATATCTATTTAATGTAACAAATAAGTTTCTTCTCATTG TAAATAATTTCATACACAGTAAAATTAATGCTTTTACAAGTTTCTATTTC CATGAATTGTGTCCCGCTTTTCTGTTCGTATTGGCGTACCTTAATTCTTG TTTAGTACTAGTAGTGGTTCTTCACTTTCACACGTGAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054639TCONS_00054639Clytia hemisphaericatranscript
TCONS_00054638TCONS_00054638Clytia hemisphaericatranscript
TCONS_00054637TCONS_00054637Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054639-proteinTCONS_00054639-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:425795..438133 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC46A2thymic stromal cotransporter homolog Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.97 6.47 2.95 2.14 1.19 0.97 0.92 1.32 0.76 0.55 1.59 1.48 0.78 0.71 0.45 0.53 0.89 1.19 1.07 1.06 0.51 0.86 5.06 5.21 0.75 0.98 0.23 0.31 2.33 2.97