XLOC_034477 (gene) - C. hemisphaerica

Overview
NameXLOC_034477
Unique NameXLOC_034477
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_244:16786..22736-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034477 ID=XLOC_034477|Name=XLOC_034477|organism=Clytia hemisphaerica|type=gene|length=5951bp|location=Sequence derived from alignment at scaffold_244:16786..22736- (Clytia hemisphaerica)
ACAGTAAAACTGAAAAAAATAAAATGGAAGCAATAAGTAATGCCCTGAAA GAAAAAAAACAAATTGGTTTTGATGTCACTGATCCTATGCGCTCATTTGC TGGCTACACAGTTTACAGACTTCATTTAAAGGTTTCAGAGGTTTTCTTTT TTTTCAGTTAGTGTTGATGACAACATAGGTATCAAATCGAAACAAATAAA TATTGTGTAAAGGAATAGTTAAATTTATGCTATTTTAAATTTTTACTTTA CCTTGTGTTCAGAAAAAAGCATGAACACATTTTATTGAGTGAATATCCCC CAAATCATATACTCTACTGAACCTGGAATCATTAAAAAAAAGATGTACTT CATTTGTTTAATCAATAAACAATATTATTTCCTTCGTGATTTGATGAGTT TTTTGGTAATAGATTTATTTCTTCCTTTCACTCATACCACAAGGGATAGG TAGATACTTTTTTAAAGCTAAAAATGTAGAAAATGCTTTTCCTCCTATAA ATTGTAATTCAAATATTTTGTTTCTTTGTTTTCAGATTTTCACTAGCCCA GAAGAAAGCACATCACAAGTAAGTTCTCCTCGAATTCTGAGGGATATTGA TGATGAAAGACTTGTTGAAGGTCTTGTTAAAGTTTTGACTAAACTGGCTA TCTTTAATCTGACATCTTCAATTTAATTTAATTTATAAAGAGTGTTTTTG TTTTAAAACTCTTGTTATTAGAATTATTTAGAAAACGTTGTAAAATATTT ACAACAAACTAAAATTTCCATCAGCAAAGGCTAAATCTAAACTACGTCTA ACCATTTGTTCTTAATAATTCCTTCAAAATTAATATTTTGTAGTTTATAG GGTGGAAAAGATTCAATGATTTCAAACACCTTCATAAAACAATGAAAACA GTATTCCCAAAAGAGTTCAATACCGGTTATAATGAATTCATCAGAGGGAA TTTCTTTGGTAAGGACATGTTTGTCTTAAATGCATTAGCTATTATACATT TGTTGGCTTCAAGTAGAGCTGAAATTTGCTGTTTGTTACAGAAACAATTA GTTAAAATAACATACATAACTACTAAACACAATTTTCTGGTGTTCATGGT GTTTTATATCCTTTATTACATAGGTCGATTTGATGAAGCTGTCATTGAAG AACGAAGAAAAGCTGCTATTCGGTTACTTTCATTCATCACACTTTACTCT GAAATGCTTGAACACCAAGTTTTCCTGCATTTTTTGGTAAGCTTTCTTTC TATTGATTTCTATTGATGAATATAGATTTTGATGATTACCAAGAACTAAT CTGTCTAATTTGGAAATGGAAATATTCAAAAGCAAAATTTTCTTGTTCAG TATCTTGTACATGAATTACCCCATCTTCTATCAAGACCTCCATTTTACTT TAGAATAACAATGAGACAGGACACAAGAGTTCTTCTGATGATTCCCCTCG TATGCATGAAGATTCAATGTCCTCAGACTCAATTGATTGTGGTATAAGCT CTATTATATATACAATACAAGAGTTAGCAGTGATTTTAAAAGTAGAAAAT TTTTTAAAGAATTATAAGCTGAAAAGTTTCTTTGGAAATACAGAAAAGTA GCAATTCAATAGAATTGCCTATAAACTATCGTTCGTTCGTTCGTTCGTNA AAATACTGAAAAGTAGCAATTCAATAGAATTGCCTATAAACTATCGTTCG TTCGATCGTTCGTTCGTTCGTTCGTTCGTTCGTTTGTTCGTTCGTTTGTC GTTCGTTCGTTCGTTCCCAATTTTCACAAAAAGATTTTTTTGGGCAAATT TGGGCCAAAAATTACAAAGGTTTTTTGGACTTTGTGTGAGATTGCTTCAT TAGTTTTTTCTGATTTTTTAATAAAATAAAAGGTCAAGGTTCTTTAAAAA GTGGCGAAACAGTTTTTTTCAGAAATTTGTCTTTGGCTTGTCATTTTTAG GGAAAATTATCATTCCTTGTGACTATCTTGGTATTTTTTTCTGATTTTTT GCACATTGATGTAAATTGGTAATGTTTGAAATCTGATAAAGCCCAATTAT TTTCAAAAAAATAATTTTTTAGGCAAATTTGGGTCAAATTTCGGATTTGT AGAAGTTGTTCCATTCAATTTTATCTTTAATGAGATAGTTATCTTTATAG GAAAGGAAGGATTGTTTTGTTTCTGCCAAAAACTCCTTGGGGGCTCCTTA GCTCTAAAACATCCGAAAGTTTCATCATGTTTTCTTTTTCGTTCGAACAT TTTCATTTTCACTCACTCAGCATGTATCCGACTAGCCATATCTGGTAGGT CCATCCAGCATGTTACTTGGCATTGTTTTTTTTTATTCTAGGGAATCTTT GTGATGAGGAAGATGGTGTCATAAGCACTGATGACGTATTAGATGCATCA ATTCAACAAATGACTGTTGTTGAAGATGGTGAGGAACCTGAAGCTCCTGA CGATGAAGTCTTCCTCAATGTCGAAAATAGTGGTTCCTCTTTTGAAGATG ATGATGGTGGTAGACACACATGGTTGAGAGAAGCAAGGTCTCTCTGTGGG GATGATTTAGAAAGCCTCGCATCTGAAGCAGCCGATGATTTTCCAATTAC ACCACGGTTGAGTGATGATAGGAATAATAGTGTACTGTTGGGTGATCCAC TTGATGATGATATTATTTGCCAACAACAACAACAAATTCCAACACAGGAT ATCACTAATAATAACAATACAGATATCACCCCAAACTCGACTGAGCCTTC AGAAATTTCAGAGGAGAGTCCTCCGTCAAATATAAATGATTTTCATGAGA AATTACAAGTTGATGAAAAAATGTCTGCTATGATCACAAAAACAGTGGAA GAGGATGACTATGTTTTTCAAGCAAGTGTTGCAATGAGCAATGCTATTGA ACAAGAGGAACTAGGGAATGTAGAAGCAGCTTTTGATATGTATAAATTTG GTATTGGTCTCCTGTTACGTGGTGCTCAAACAGATAAAAATACAGACCGC ATTGAGGCTGTCAGGAGAAAGACTGCTCAGTATTTACTCCGTGCCGAAAC ACTTTACAAACTGTGCTTCAAGGACAAAGAAGAATTGAAGGAGGTTAAAA AGGATGAAAAAACAATTCCTACAGATAGCATGTCCTTAGATAGCAAGTGG AGGTTTCGATTAAGTGATGTAAAGGTCATTGGTGTTATTGATAAAGTTAT GCTGGTCCAGAAAGTCTTTTCTAAAGAGGATGATGTATTTATTATGAAAG TGCTCCATAAACAAGGTGCCGAATATAAAAGGACGGTATCGAATAAAAAG GCGAATAAATCAAAAAGGAACTTGTATAACTGTCGCTTTATGACAGCTCT TGTGAACTGCGTTGAGACAAAAACAGGTGTTTATTTACTGTTAGAACATG TACATGGTGGTCGACTATGGGACCTGCTAGGACTTCAAATATTCACTAAT CGACGTAAAAGCTCAAATCACCCTTCCATGACAGATACAACACATCATTC TTTAAACTCTTCAACTTCACACCATGACGCTAACAATGAAAATATAGACA TTGTTGATATTCCAGCTAGTAATTATGTTCAACAAGGTTCTGGTGCATTC CCCTCAAGACTAAGAGGTGTTTCTTCAAGCTCAGTAACTTGCAGGATAAA AAGATCTCCTTCAAAGAGCTCAAATCTTGATGAAAGTGAAGTGCAAGTAT GGGCAGCACAAATTGCGTTAGCTTTGATGGACCTTCACTCAAAAGGAGTT CTTTGTAGGTGAGTCAAAAATGCTCATTTTCTGTCTGTAGGAGTCTTCAA ACAAATATACAATGATGAAGATCTCGTACTCGCAAAATGCTTCATTATTA TTCTGGAATATTACATAATTTTCATCTATTTTTTTTCAAAACTTTCCTTT CATCAATACGCTCATTATGTTAGTTTGTTCTAATTTACCTTCTCTACTAT TTTCAGAGATTTGAACCCAAGAAACATTTTAGTTGACACTAATGGGAATA TCAAGTTGACATATTTTTCGCAAGTTGATGGTATCGATTATTCACTCGAT GACAATGCTGTTCAATGCTTGTACACCTCACCAGGTAAGATACAAGTTGA AAATATTTTCGGGAACTTACTAATAACGTTGTTAGAATGGACATCTTTTT CTGTATAGACAACCAGCTCGTTGGGGTTTAAGTATTCAAATTAGCCAATT TTATCACTATCTTGTAAAGCAAAAGCTGGCAAAAGCTTAAAAGATAATCT AATCATGACATAAGATAACCCCTCATCCAATAAGCAAAAATATGCTATAA TATCAGGGGTGGTCAAACCAAATTTTTCAGAACATGAACTAGAGTGCTAA TTAAGAAAGCCCTGACCCTGAAAATTGGAGTTGATTGTAAAAAAATTGCA GCCCGTCTTTCAGGGTATTGATTGAATTGTAGGGATGTTTTTCCACTTTA TTTATATTTCTAGTCTCTTCATATTCCTTTACTATGTTTATCCTTTTAGA GGTAGATGGTGTGTTTGAACCTACTTCATCAACAGATTGGTGGAGTTATG GAGCCATCTTGTTTGAGCTATTGACAGGAGAAGTAAATATTTTTCTGTTT TTTTTTTCATGGTAAAGACCACACAAACATGGCAATATCTTTGATTAGTT TTGTTTTCTTAAACTTAAGTTCCATACCGCTCTGACAGGAGCAAAGGAAA GATGCTTAGCACAATATCTATATTATTTTACAATATTATTTTTAATTCAG GCTCTATATTCTTGTCACCCGAACGGTATCAGCAGAAGATCAGTGATAAC TTTACCAAGACGTGTCAGTAACGAAGCTTGTGCCTTGTTAGCTGGGGTAA ACCTTTCTCAATAAAAGATGTCACTCTTTTGAATAGATAGATAGATAGAT AGATAATGAGCCCTCAGAATGCATTCGGGATGGGTCCTACCCACGAAGGA GTAGGAATCACGGCGCTGACAGACACTGTGACTTGACAGACGCAAGCTGC CAAGCCATGGCGTATACCATGACACTCAAACGACACTGGGAGAGCGATGC TCACGCGAGCCCGAACCTTTTGAGTGCCACGGCACGTCACAATGTCTGTC TAATCTACCCACACTCTTGTATCAGAGTAATGGTACCCAATTCCCCTCAC ATGGCATGGGTTGACCCGGGTGAAGGTATATTCACTTGCCAAGTGAATCG AAGAGACACGGTGGGTATCGATCTCGGGCCTCCCAGGCGGGAGTCAAGGA TGATAACAACTATACCACTACGCCACACTACACCACTCTTTTGAATAAGG CTTGTATTAATTGCTTGCTTTTATTAAGTCTGATTGCATAACAAATACTG CTTAACTTTTTACTAAAAATTCTAATGATGATTTTCCTTTATTTCAGCTT TTAAAGTATGACTCAAAAGAAAGATTAGGTAAGTCCAATCGTTGATACCA CGAAGAAAAGTGTTACAAAACATCATTCCATACTGATTAAAGTGTCTTCA AAAGTTTTATACATTACGTAACAAAAAGCTCGTGATATCTCAATTCTTCA TTGCTTTCTCAGAAAACTTGTAAATAATATCGCTGATCTTAGCCAAGTAC AATAAGTTGATAATAGATAGGTTTTTTATTAATGCTGTTATTATGTCAAT AATTGATAGATAAGAGATTTCTTAATTTCTTATTTAATGCTGTTATTGTT CATTCCAGGAAGTGGACCAACAGGAAATGAAGAGATCAAAGCTCATCCAT TCTTTCACGGAATCAATTGGGAAAGTCTGAAGAAAAATTCACAGCAAAAG TTTTCCTGAGAAACGAAAATTGCTTTGGTGACTTTTGGTTGGTGAAGGTA TCATTGAAGAGTATATAGTTAAAACTGAAACAATTTTTCTGTTATAATTA AGGGCTAGAAACTCCTAGAAATTCGCTCTCGCATCCTGCAACATTTTGTA A
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054729TCONS_00054729Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054729-proteinTCONS_00054729-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_244supercontigscaffold_244:16786..22736 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.34 0.49 1.81 2.27 2.02 1.53 0.5 0.73 0.33 0.46 0.21 0.32 0.4 0.18 0.02 0.03 0.07 0.07 0 0.03 0.18 0.07 0.14 0.21 0.81 1.09 0.09 0 0.17 0.27