XLOC_034475 (gene) - C. hemisphaerica

Overview
NameXLOC_034475
Unique NameXLOC_034475
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_244:165613..169988+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034475 ID=XLOC_034475|Name=XLOC_034475|organism=Clytia hemisphaerica|type=gene|length=4376bp|location=Sequence derived from alignment at scaffold_244:165613..169988+ (Clytia hemisphaerica)
CATGATATCAGTGACGATTCGTTAATTGGATACGCCTTTGAAGATCACGA
TGCCGCCCATCAACACCAGGTACCAAACGCCCCTGTTTTACTACCTCTCC
CTCGTCGCTGCCCTAACTCTCACCTTTTTCGGTCTGTTTGAATAAAGTAA
TACATTCCAGTATGGATATAAAATCTTTTGCTGTCAGATTCAAAAAGGTC
AGCTTGATGGCTCATTGGCCAATATATCCAATTTCATCTCCAATACGCGT
ACCCCGACTGGAGCATTTTAGCACATTGCTTAAAACATAATTGGGAATAT
TCTGGAGCAACAAACACCCTGAGAAAAGCTAACTAATATATTTGATATTA
TTAGAACTGCTTTCCTGCAGGCGACCGGATAGTGCAAANCTGAGAAAAGC
TAACTAATATATTTGATATTATTAGAACTGCTTTTCTGCAGGCGACCGGA
TAGTGCAAGGGTAGAGTAGCCGGCTACGGTGCACAAGGTTGTGTGTTCTA
TCCCACGCCGGGTCATATTTCATACAAAGATATGCTTtatctctgcttga
tgctcagcataAGTGGACCAATCCAGAGTGAAGTAATGGCGCCTTCGGGT
GGGTAGCtattgaaagaggagccttcgggtccaCTCCGACTACCGTTGCA
GACTTACTTAGTTTTAAGCAAACAAATGATTCCTTTCAATTCAGATTGGT
TTCGTGAACGCTGGTGTTTCAGTGTTAAACACAGCAAGTCATATTCTTCT
GAACAAACGAATCAAGAAGCTTGAAAATCATTGGGATAGACGAATCAGGG
AGCTGACAAGAGCAAATACCAATTTCAAACGTTGTGagttttctttagaa
aaagtaataaaactgtttttattacatgttaacgaccaaccaaatcaaat
aagagcttgcaaaaactccagcttgtccctgcTATTCTGCGACGGTGACG
GTTAGCATCTGATTTGCTGAGGACGacagtaaatcagcacttttttaCTG
TCcttgatattttttttgggTCAAAACTGTGGGCTATTCCAAATTGCTTC
AGTCACTCCGCCTTCTTAAAAAGTGCTTACtaatgttttgttataagaga
TTTTTCGTCACCGTGTCCCGACTTGTTTTCTTTTCAGGTAAGCTTTGTTT
GCTATGATATAGAGTACGAAGCTTGGGCTCATTGGGGAAGTAAACTTTCA
AATACCTTATTGGTAATAATAACGACGACAATAATTCGTCGGTAAAAATT
TACGTCAGCAAGGCGATTTTTTCTTCACTATTGCGAACGATTTCTTTACT
GATATTGTACTTAATTAGTGTGTCGGTTCGTCAGTGCATCGTCTATTTTA
ACGATCTagaattgtcaataaaagtgaacCTTAAGGCAGTACTTCCAATG
GCATCTTGCTAGCCTATGTCGGTTTAAATTGACATCGGCACGGAAGTGGC
CGAAATATAAGGGGTTAGACAGGTTATTAGGCAATAGATGTTATTCTGAT
GTCTTATCATAAACTTTTAAAAGGGTTTTCCCCTTAAGTTCGATAAGTGG
GGAGAGTACTTTCGggtcttgtttttgttttcaaaagcctcaaaaaattg
caatgctgCCATATACTTTTTATAGAATTCAGTTTATGCAATACATATAA
CTTATTATGTTTTTTAATCTTTCTTGACATTCGTGAGAGTTTATCCAAAT
AAATGTCAGACACTGACATCATCATCTTTGCCAATTTTACTGGGAATTTT
GATGATATATAATATGCGAGTGTTTAGTGAGTCATATTCACGGTCAtatt
tccatttcatcatggatattttaacatttttataaaaaatcatcctaaaa
tgtTTGTAACAGTTACTTCTAGGTTAGGGTCCAAACCTTACCTAAACTTA
ATTGCTTGCTGAGTACAGATTTAGAAATCAGACTATTTGTCTACTTGTCC
ACTACATATTTGGGCAAAAgaaagtattatcttttttttatgGCTCTGCT
TGAAATTGCCCTAATTTGTTGACAGCCGATGGGTTTTTTTACTCTTAAAG
ATCACTATTAAGTATGCGTTGGTCGAGTTTACAGTATCGTATTTCTCTTG
TCTGTGCATAGGGTATTTACAATATTTTGTTTCTCGGAAGATTGACTGAC
CAATACACTGTATGTTGACACTTGTCTTTTTTTTGGTGTCTTATTCCTTT
CAGTCTTTTATGATCATTCAAAACCTAATCATTTACATCTTATCGAATGA
CAACCATAGTCAAACTCCCACTCAGATAATAAATATTGATAAAACATGAG
TCTCAAGaggtttcaaatttttcagccCGCGATATTTGCATTGACAAAAT
CGTCAGAATTTGATTATGAAACTATACATCTCAGCGCTTCCTTTGCCCAA
CGCCACTCCTCATTTGAAAGCTAATAATATTTTAATGCCCGTCAAAAAAT
CCCGCAATCGACCGAGAATCTTATTTTTGTTGGCAAAAATGTCGTCAATA
AGCGACTTTTTTATCGTCTTATTTCGCCGACATTGTAAAAAATAACATTT
CTTTTTCTACAGGTTTCGTGACGTCCGGATTAACCTTCTTCTTCTTATCA
CTTTTGACGGGATTCTTCTTGTGGCAACTACTGACACCCGGAACAGCATA
CCGGTACTGGAAATGCCGGGATGGTTCTATACCGGATCATCAAGCAACAT
TTAAATATAATCCTGACCGATTCTCTTTTTCGGTATGTGTTGTAAGAAGC
ATTTTCATTTGGGGGgttgaagtttagtgacaccgcgagggcaaaccatg
gtttggcccgagggggggaattttgaaagtttgagctctatattgcttga
aaatgcactcaaagcAAAATCCtttagagaaaaacaacataaaaactttg
cattttacaaaataaacatatttgcaaaaattattgggggcatAGCTCCC
CTTGCCCCCCctccccagttgctacggcactgtgaTTAAAAAAGTCGATA
CTTCAAATTATGATAGACTTTTTCATGGAATCTGAGGTCCCGTATAAACG
TCTTCACCGgacatttattaatttttgaaccCCACCCCTTTTATTTGGTA
CCCGATACTATTCTGGACCTTTGAAAAAATGCTTTTGTATGAAAGTTAAG
CCTGCGGCAATTTTATTAATACTTCTGCGTTTTCTTCACTTTAAGTATCT
TGTCGGTTGTGTTTGGGCTAATTTTCCTCTTTTCTATGTTTTGTAGCTTG
AAGATGTGAATGGGATCGAATTTGATTTCAAGAAGCTGATGAAGAAGACA
GAACATTCACAATACTCAATGATGGATTCTAAAGGTTTGTTTACATGTCA
GTTTACCTGTTTATAAATGACACTTTTCGATCTGAAAGAAAGGTCTAAAA
GAGGTTAACAAAttgatattttacgtggatagcctgTTATTCTAGGCATT
TTAGACAGTTTTTCGATTGGCCGACTATCTCAGTTATCTATGACCTGAAC
TGATACATATAGCCCCTACTCTTGTCTCcagaatagacgggggggggggg
cccgaaaaagcaggggggggggaaaattttctaatttttaataggggggg
ggggggggaaaaggggggggggggggccgaataagcaggggggtaggaaa
attttctaaattctaataagcggggggggatggaataagagggggggggg
taatttgaagacatagtttttttaactgatatcaatttcaacaacaaaaa
agcaactttaacaaataaacacgtaaaataagaaccaatactaacggAGA
GGAACATTTTCACAAGTTTAAGGTCtttctacactgtaataaaatattga
attactCGAATTTAATTACAGGGAGGTCTTAATAAGGGtggggggatgga
tttttttttcgattaacaattagcggggggacgtctattcgggagacaag
agtaagccCCCCCACCCCAATATCGCCAGCGCTGAAAGGCTGAACAAAGG
TTCTACACTAACATCGGCgaaagttttaactttttttagctttttttggc
AATTAAGGttacatttttatgttttaaaacaTGCACGATTTCCTGATTCA
TTTTCATTCTTCTAATGTATAGCATACCCTGGCGTTCGTTATTACCTGAA
TGTAGACGTTTGTGCGTACGGCGGGACGCGTTCGACACAAGATATAACAA
CAGGTCAGAAAGTGGTATATGGCCCTGATGTATTCGCAGTTGACAAAGAT
TGCAAAGAAGCTTTTTATTTTGTCGAGTGGGAATTTAAATGGCGACAAAT
TTATTAGTCCAGATTTGTCAATTTCACGCATACCATTCACAACCCGTTGA
ATTTGACCTGTGTTTCTTAACTTTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054726TCONS_00054726Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054726-proteinTCONS_00054726-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_244supercontigscaffold_244:165613..169988 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.85	3.59	2.19	2.29	18.5	11.94	23.27	30.86	38.45	61.46	48.71	30.2	37.5	27.86	23.27	23.55	14.92	13.01	23.77	29.05	8.33	8.22	10.57	14.86	21.51	16.9	102.24	94.38	46.16	39.6