XLOC_034523 (gene) - C. hemisphaerica

Overview
NameXLOC_034523
Unique NameXLOC_034523
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_245:163886..172686-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_034523 ID=XLOC_034523|Name=XLOC_034523|organism=Clytia hemisphaerica|type=gene|length=8801bp|location=Sequence derived from alignment at scaffold_245:163886..172686- (Clytia hemisphaerica)
ATTATTTGTCATTGAATTAGTGCAACAACATTGTATTTAGGTACAATTAT TCACAAAACAACTATGGATGAAAATTGGGATGCTGAAATAAAAGGAACAG CGCCTGTCAATAACTTTCAAAATCTGTCAATCAGTCAACCTAAACCAAAT AATTCATCCAAATATTTCGATGATGATTACAATAACGATACAAGAGATGA TGAGAATTCATTTAATGGCTTTGGTTCACACATATCATTTGATGGTGGGC GTGGTGGTAGAGGTCGTGGGCGAGGAAGAGGAAGGGGAAGAGGAAGAGGT TTTGGGTGAGAATAGAATTAAATTCTAATATTATTAGGGTTTGGATTAAC CCTTTAACTGTCGATGTCGGCAATGTCAGCATATATAAATTAGGTTTACA GCACAATATGCTCATTTTCTTTAAAATGTTGAAGAATTCAAAGATCGCCN TCGATGTCGGCAATGTCAGTACATATAAATTAGGTTTACAGCACAATATG CTCATTTTCTTTAAAATGTTGAAGAATTCAAAGATCGCCTGTTCCTTGTA ATTTTGTAATTTACAAACACTTTTTAAAAGAACTGTCAGTTACTGGTGTA CTGTTTGTACTTTTAGTCAAATTTTAAAATTTAGAATTTACAGTTACCTT AAATTTTGTAGCAATTTGCCAACTTCCCAACTCGAAAGATACAATGCCTC ATGATTTTTGGTTGTTATCTTTTGACTTTATGTAAGGAATTATTCTAATC AAAAGCACCAAACTCGTGGTTAACACTATACCCTCGAAATCTCAAGACAA ATATAAAAAGTTTTATAGGAGATAAAGTTTGTTATTAAAAATCTTTTTTT TCTCGTTTCAAAACTGCCCTGTCCACGATCTTTATTTAATTATTTTGTCT GGTTTTGTATAAAAGATAAAAATCCAATTTCAATATTTTTTGTTTCATCA ATATTAGGGCGGATAATTGGAGAAATGAAAGGAGCCCCCCTCCACGTAAT GGTTTTGTAAACAGTGATAGTGGTAGTCAACAAGGCAATGGGTTCGGTCG AAGCTCTAATGGTTTTGGGGAAAGTAGTGGAGATGCTCTTACCATGATTG TTCTCACAGAATATGTTGGAAAAATTATTGGTTTGTTTGTTTCAGCCCTT TCGATTGACTTCCAAATTTGCCATACTCACCAACTTTGCCAAATCCACAA TTTCAATGTCAAAAGATCACAGCTTCATGGCAAATTTGTACATNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAA TTTTGCCAACTTTGCCAAATTTCTGTCAATCGAATGTAAAATAATTGGCA AACAGGGCAAAATTGGCATATTTTGAAGTCAATCGAATTGGCTGTTTGTT TTTATGTAACTAGACAATCCGGAAAACTTGTTTATAAATCTGACTGGCTC TTAGCTTTTGAAAATTATCCATTGTTACTGTACTTGGCACTGATATTTCA AATGAATGACTATGAATCTCAATGTAAGAAGGGTACTAAAAATGCTAAAG AGGTGCTAGCCTTAAAAGATATTATGCGGATAATATTTGGCACAAATCTT ACTTTTGGGTCCTAGAACCAGCAGAAAAATAATCAACCATGATTAGCCAT CACAACCTTAAACACCATATCATTTTTTAGTACGGTTAAAGGCCCCACTT TTAACTTGGTTTAAAAATGTAATCATACTTACTGTAAAGTTGGTAATATG GTGGGATTTGGACAATTTCAGAAGGTCTAATTGATTTTTTGCTGTCTAAT TTTCAGGATCTTTCAATTATGATCTTGCAGGGATGTTTACTGAAAATTGA AATCAGAAAATGCCCTAGAATGTGTCCTAAAAAGTCCAAAACTTTTCAAA TCGAATGCAATTTTTTGATGGTTCTAAGACCAAAAAGTACCTCTGTGCCA AAGCTCAGCCACATTATTCATTATAAACGGTAGGTTTTTTGTCATAAACC TATAAAAAGCACAAAGAATATTTCTTATTCCAGGAAGAGGAGGATCCAAG ATCAAAGAAATCCAGGCAGAGTCTGGAGCTAGAGTTAGGGTTAGTATTCG AATAATTATATATTTTTTTGGAGTCAATATACATTTTTCCTTTTTATTAA AATATAGTAATTACCATAAAGTTCTATCCTCCTTATTTGCAAATATTGTT TCAAATGAATTTGTTTTAGATTGATAAAAGTCAAGAATCAGGCTATGACA CTGTTGTTGAAATAACTGGTACAGAAGAACAAAAACAAAAAGCCAAACAG ATCATTGAAGATTTGACCATTCCCGCTGGTGATTATCAGAGATGGGGAGA AAGAGAGGCTCGAAAAAACAATGTACAAACAAATGATAGTGCTCCAGCAC CTATCAACTGGGGGGAGCTGAAACGCCAAAATGATGAATTTCAAGCTGCC AAATTTGCAGATTTGGTCCAAATCAAAAAGAATTTTTATCGTGAAAATAA AAAGATAGCAACTATGGACCCGCTTGATGTAGCTGCAATAAGGTGAAAAA CTGGTATGCAACAAGGTTTTTTCCTTGTAAGCATTCTGTTCAGTTCATTG TTTTTGTTCTCCATTTTATCTGATCATCTAAGAAATTTAAAATTTAATCA AAACCAAATTCAAACTTTTACATTTAGAGCAAAGAAGAACAATATTTCAG CAATAGATTTGAGCGATCTAAACAGGCCCATTCCAAATCCTGTTTTATCA TTCGAAGATGCTTTCACTGACTTTCGTGAGTTGTTGCATGTCCTTGATTG TATTATTAACCTAACCTCAAAATGGTCCCAAATTAAGCTAAATAATTTTG ATCAAAAGATTCTCTTTCATTAGGTTCGATAGTTTATTACTTTCTAACTT TACTTGTTTTGAAATAGAATTCTCTCCGAATATTCCAATTCCAATATTCC ATCATCTTAAAGAAAAAGTTTTTTGTTTTTTTTAGCTGAAATTTTGGAGA CTATTTATGACAACAGATTCACGGAACCCTCTCCTGTCCAGGTTTGCATT GTCATAATTGAAAGAATTTTGTTGGATTGTATTTTTAACTAATTTGTATT CTTTTTGTAAGCAATGTCAAAACTTTTGTGAAGAAATAAGGTTAAAAGCA GCCACTATAAAAGTATCCATTCGTGATGGAAGCTAGAAGGGTTGTTGGAG CTGAGGACAATAGAACTAGGTGTTTTATTTTGTTTTTTTAGTCACAAGCA TGGCCAGTTCTTTTGTCTGGAATGGATTGTATCGGTATTGCACAGGTATG GCATCTAGCTTTATTTCAAGTTTGTACTTAAAGTCGTTCGGCCTTCTCAA AATCTTCTTTCTTTCATCGATTTACACATTGTAGCCTCAACCCTTGTTGT ATTATGGCTTATTATTGCAGTCATTTTCTTTTTAGACTGGTACTGGTAAA ACACTAGCTTTCCTACTTCCTGCATTCATTCATATCGATGAACAGATCAC GTAAGTTGCTTTTGAACCCTCAGGAATCATAGTTTATCTTTAAAGGGATA ATCAGATGGTTGCCAATATTGAGATATTTCACTACTAAACCTACAGGGAA AAACAGACTGTATTTTTCCTTACCCAAAACGTAATCTTCAACTCAAATTC TTTTAAAAGATCTCAAAAAGCAGTCGCCATTTTTTTATGGATCTCGCATC GCGCTTTCTAGTTTGTTATTGTAAACCAAGTTCGCTTACCAACTCACAAA ATTCTGAGAGACATTTCACTTTTGTTTATTTGTTTATGCGGACCGTTGAG GAGCAAATTTTTAGTATTATCGCCCTTTAAACAGTTCCGAAGAAAACCTT TCTGTCAGGGGGTTTAGAGTGTAAAGTCCTGCAAAGCATTTTGTAAATTA TTTCTTTTATTGGGTAACACTTTTCTACTTTATTTTACTTCCCTTTTATC TTGTGAACATAAAACCATGAAGATTCCTATTTTAATGTCCAATATACATT GAGAAAATTCTACAAGACCCCCTGAAATATATCTCACCTTCGACAAGTAA GAGGGACTTCTCAGGAACTTCAAAAAAAAAACAGTGGGACCTCTCGCGGA CCTTTCACGTTGGAAAGAGCTCAGAATTCGAAATTTTAAAGTGGAATATC CAGACATTGACTTGTCAGTTGACATAACTACTTGGGGAATCACGTTTTCT CACGTATAAGAACAGGTACTCTTAAAATCTCAGACCATCTGATTATCCCT TTAAGGGGACTAATTTTCGCGAGAACTAATTTCGGCGAATTTTTCGGCAA AAAAATCACAATATTTCCATGAATTAGTTCATTTTTAAAGGTAATTGATT TAAGATACTGATTCTAATACAATAATTTTATATCATGCCATCAATTTCAG ACCACGAAAAGAGCGTTCAGGTCCAACATGTCTTGTGTTATCACCAACGC GTGAGTTGGCTCAACAAATCGAAATGGAAGTCAAGAAATACAGTTACAGG GGAATCAGAAGGTATCTCTCATTTGCTTTTCACACTACAATCTCGATTTC ATTCTAATATTTCTAATAAGGGATTAATCTTTTTCAATACTTGAAGTAGA ATATTTAAGGTTATTCAGTTATGATTCATTTATTCTTATTCTAGTGTTTG TATATATGGTGGTGGTGATCGGCGAGAACAAATTCAAATGGTCAAAAGAG GAGTCGAAATCATCATTGGTATTTTGATTATGATTTTATTAACTTCTTAA CCACAGTTGAGTTAGAATCTGAAAGTACTACATGCCTGTCTGACTGAACC TAAATGCCATAGGGTTAGGCAAAGTCTAGGTCCTAGGCAAAATGATAGGT CCCCCCAAAGATTTAGGCCCCCCCCCCCCAAATATTAAAATTTTTTTAAG CAGCCTAGGTATAGGACTGGGCCGAGTATAAAATATTTGTTGATTTAATA TCGTTTTTAGGAAAATAAAATTTCTATTCTTTTGCCATTCTCGAAATCTA TTTCGTGGGTGATAATGACTGGATTATAATGGTTAATTCAAGATGAATCA ATAGAATGTAAAATGAAAGGTTTTTGGATGAAAATGTGGTGATATAAAGA AAAATATTGGAAGAAGTCAGCCCCCAGCCTTGCCATTGTAATAGACCTTA TCGGAGTTTTTAATTTCTAAAAAGCGATGCATCGTGGGATTGTTTCGAGT GTATTAAAATAGAAATCTCTAAGGAATTCCTCGAGGGAATTCTATTGTAC TACCCCCGGAACAATCCCACAATACATCGCTGTTTTACAAAAATCAAAAA CTCCGATAAGGTCTATTCCAATCCCTTACTAAAAACATAAAATTTCCCAC AATATCTTTTCGACATTATTGGTTTAAAGTTTTATTTNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN CCCCCCCAAAAAAAAAAAAAACGTTAGGGAAGCTATGCATCGTAGAGACT GAAAATGATATGGCTTGATTGAGATATTTTCTCATTTTTAAGATTTTGAT TTTGAGCTCTGGAGGAACTGCAATTTAGTCGAATAGTACTAAAGAATGTA GCTTCAGCTCAGTTTGATTTCACTTTCTAAGTCTGCAGTGATAACAGAGT TTACAAATAACTTCTTTACTTCAGGTACACCTGGTCGTTTGAACGACTTA CTAATGAACAATTTTTACAGCGTGCGAGATGTCTCATATTTGGCAAGTTT TGTTTATTTCGCTCTTAAAATTTACTTTTAGCAATTAAGTTTGCGACCCG AAAGCCTCTGCTTTATAGCTGTCTACCATATGATAGGAGCTTCGCTTCTT TCTCTAGATTTCTCTATTCACCTTTCGCGCTTCTCTTTTAGCGACCATCA AGTAGAGAGACATTAAGTACCATTTGTTTTAAGTCTTTGTTGGTATGGCT AGACTTGGGATTGAATCCATAACTATGCGCACTGTTGTCGAATTCTCTAC CTTAGGTCATTTCCTTTATAATTTATTTAACTTGACGCGTGGCTTCTATT CCATGGACAGAGATGTTTAATATAATCTTCTGCCTAAATCTTTCAGGTTT TGGACGAGGCCGATCGTATGCTTGACATGGGATTTGAGCCAGAAATTAAA AAGATCCTGATGGACATTCGACCTGATCGTCAAACTATTATGACCAGGTA CGGTAAATTCACAATTTGCAATTTCAAGGCCATTCTCAAAAAAAGAAATT GAATCGACACGAAATCTTTGTTATCACTGAATCGTGAAAATGAATCCAGA AAGTTTCACGACTCACAAAATTAAATCTCTCGAAAATTAATCAGGTGAAA GTACTTAGCAACTTCTTTTGCTTCTATTTATTATCGATCCAGTGCAACAT GGCCACCAGAAGTACAGCGAATGGCAGACCAATATTTAAAGAACCCTCTC CGTGTGAATGTTGGATCTCTCGATTTACAAGCATGTCACTCAGTCACACA ACTCATTGAGTTTATCGAATCCGAGAACAAACAAGCAAGGGTACGATTGG ACAATTTCTCATTTTATAGAGATATTTGGTTCGAAATCAGTCCAAATTGT TGACTTTCAATTTTATTCTCGAGTTTTATTTATTCAGTGAAAGTTTTTCA CTTTTTTTAGCCTTTTCCTCCTTAACTCTTAGATGAAAAGGTATTGTGAT CTCTACTTCTATATTTGCATACGCAGCTCCATGAATTCGTAGCTTCAATG GGTCCGGATGACAAACTGATTGTTTTTGTCGGCCGCAAGGTGACCGCTGA TGACATCTCCTCTAACTTTGCGATGTATGGAGAACGCGATTTCGGTATCC AGTCTATTCACGGTAACAGGGATCAAGCTGATCGAGAACAAGCGTTGCAA GACATGAAGACGGGCGCTGCTCGTGTCTTAATCGCTACAGATGTCGCTTC AAGAGGACTGGACATTAAAGATTTAACGTAAGATATTCCACATTATCATG ATGTAAAGCTGCCTTGTTAACGCTCGCCAATCTTAAGGACTTTAACCACT TCTTTTAGAGTTGAGAAATTTGAACTTTTACTTTCAGACATGTACTGAAC TATGATTTCCCACGCCATATTGAAGATTATGTCCATCGAATTGGTCGAAC TGGTCGTGCGGGCCGATCGGGTGTCGCTCTTACTTTTGTTACGCGAGAAG ATTGGATGCACGTCGGAAAGCTGATTCCTATTTTAGAAGAAGCAGGACAG GAAATACCGGAAGAATTAATTGAGATGTCGGAACGAGCCCGGAAAAATCG AGAAAGACGTCTGGATGAAAAGAACAGAGAACGTAAGTTTGACATTAATG TAAAAGCTGCTCGAACCTTTATCCCTCTTCCTTCGTTGTCTCATTCTAAA TTAAAGGTTTTGTTTTTAAAAAAGAGTTTTGCTTATATCAGCACATTATA ACAATAGGCAGACACTTATGTAAAAATAAAACCTTGTGTGTAAAACTGAA AACGAAGCATGGATAATTTTTAAAAAATCACTTGAAATAAGTAACAAATT GCATAAGTTTAAAACTTGTTAAGATTAATTTTGTATTTCATTCTTTAGGC GGGATGGTTGGAGATCGTACGCGAAGTGGATGTTATAATTGTGGTAAAGA AGGTCACATGTCACGTGAATGTCCCGAACAAAGCAGAAGAGGTGGACGTG GTGGCGGTCGTGGTGGTGGTCGTGGTGGTGGAAGAGGGCGGAGAGAACGG GGTGGAGGCATTAGCATCGGTAGAAGTGATTTTGCATGAAGAGGCGTCTT GGGTGAGAAAGTTCCTCTGAGTAAAAGAGGATTTCAACCAAAGGATATTG GGTGACTCTCCAGAAGTATTTGGAGAATTATTCGGACTTCGTATCGCTTT TAATGAGCAAAATGAATCACAAAAGATGCATTTTCAAAAGATTTTATTTA TTTTTCTTGTAACTAGCGAAAAAAAACCGAAAGTTTCTTTACAGCGACGC ATTATCAAGCTTGTAAAAAGAGTTTTATGAAATATTTTATTTTATTTTAT ACTTTTTATTTTATATAGTTGTGTTTATATTTTTTCATGGGCTTCACTTT GAGTGTGGAATATTCGAAGACTAAACCCAGCTGGCACACAACGTTGTTTC AACGTTCATCTAACGTTATATTGACGTTGTGAACATTAGATAGACGTTGA AACAACGGCGTTTGCCAGCTGGGAACGCTCATTTGAGAAAGAATCCCATT CTCAGGTGACGTTGGTTAGTTGGTCTAGTTTTTTACCGAAAGGTGTAAAA TTTTATTATCCAGACTGAATCTATATGAGAATATTTTATGAAAGATGGCC CTTAAGAGGGCAACTATGACGAAAGGTTTTTCCAGTTTTTTCCATTTTTG ATACCATATCTCATATTTTCGTGGTTTGTTTTTGTTTACGTTTTAAATGG G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00054802TCONS_00054802Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00054802-proteinTCONS_00054802-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_245supercontigscaffold_245:163886..172686 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DDX53DEAD box protein 53 Homo Sapiens
DDX43probable ATP-dependent RNA helicase DDX43 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.77 10.38 3.57 2.24 56.7 46.14 27.99 31.49 17.09 24.47 15.22 12.01 13.51 13.95 15.36 21.05 20.76 18.63 3.88 5.64 21.37 22.11 29.14 30.18 48.28 59.18 10.76 9.14 27.01 31.74